Acep002104.1
Basic Information
- Insect
- Atta cephalotes
- Gene Symbol
- CDC5L
- Assembly
- GCA_000143395.2
- Location
- NW:5624776-5631469[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-17 4e-14 51.6 1.5 2 46 9 54 8 54 0.97 2 2 2.2e-12 1.5e-09 37.0 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- atgccaCGAATTATGATAAAGGGTGGTGTCTGGCGGAATACAGAGgATGAGATTTTGAAAGCAGCTGTAATGAAATATGGAAAAAACCAATGGAGTCGTATAGCATCTTTATTACATAGAAAATCAGCCAAACAGTGCAAAGCCCGTTGGTTTGAATGGCTAGATCCCAGCATAAAGAAGACTGAATGGAGTCGGGAAGAAGACGAAAAGCTTCTCCATCTTGCAAAATTGATGCCCACACAGTGGCGTACAATTGCGCCAATCATTGGCCGAACAGCTGCCCAATGTTTAGAAAGATAtgaatatttacttgATCAAGCACAAAAGAAGGAAGAAGGAGATGATGCTGTAGATGATCCTCGTAAACTTAAACCTGGTGAAATCGATCCTAATCCTGAAACCAAACCAGCGAGACCAGATCCTAAAGATATGGATGAGGATGAACTGGAGATGTTGTCCGAGGCACGTGCTAGGCTAGCAAATACTCAGGGCAAGAAGGCTAAACGTAAAGCACGTGAAAAACAATTGGAAGAGGCACGCAGACTCGCAGCTTTACAGAAGCGTAGAGAATTAAGAGCTGCTGGTATTACTGTGTCTCAAAAGAACAAACGCAAACGCGGTGTCAATTATAATACAGAGATACCGTTTGAGAAACGACCTGCATCAGGTTTCTATGACACTTCCAATGAGCATGTTGATCCTTTGGCGATCGATTTTTCCAGAATGAGACAACAACATCTAGATGGTGAACTCCGACAAGAAAAAGAGGAGATGGAGCGTAGGAAAGATAAACAGAAATTGAAACAGCgcaaagaaaatgatatacCTATGAGTATGCTCAACAATGAAGAGCctataaagaaaagaagtaAATTAGTCTTACCAGAACCACAGATCTCTGATCAAGAATTGCAACAAGTTGTGAAGCTTGGTAGAGCTTCGGAAgTTGCACGAGAAGTTGCTACTGAGAGCGGTATTACACTCTCCGACAGTTTATTGGCTGATTATTCTTTGCCTACAAATGCATCAGCAACACCTCGTACTCCTGCTGTTACAGATAGAATATTGCAAGAAGCTCAAAATGTTATGGCTCTTACGCATGTGGATACACCATTAAaaggCGGGTTGAACACTCCACTAAATAATCCCGATTTTACTGGCGTTGTGCCTCCTACCAATGTGATCGCAACGCCAAATACGATTTTAGCTACTCCATTTAGATCTCAACGCAGCGATGGAACACCTATGAATTCGTTCAACACGCCAGGCGGAGCATCAGCACGAACGCAAAATGGAGTTTTAGCGGCAACACCTGTTCGCgataaacttaatataaatCCAGATGAAAATCTAGACGGTTCAGAAACTCCACTCATACAGACGCAGGCAAGGAACTCGTTGCGTACGGTACTGAGTTCTTTACCAGCACCGTGTAACGATTATGAAATAGATATCTTCGACGGAGAAATAAACGATGAAAATATTAGTGCGCCTGCAACTGATATAATCGAAGACCAAGCGGATATTGATGCGAGACAACAACAAGAATTATTAGAAGAAAagaaaataGCTGCAACTGCTGTAAAATTCTTGtaa
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDAVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGITVSQKNKRKRGVNYNTEIPFEKRPASGFYDTSNEHVDPLAIDFSRMRQQHLDGELRQEKEEMERRKDKQKLKQRKENDIPMSMLNNEEPIKKRSKLVLPEPQISDQELQQVVKLGRASEVAREVATESGITLSDSLLADYSLPTNASATPRTPAVTDRILQEAQNVMALTHVDTPLKGGLNTPLNNPDFTGVVPPTNVIATPNTILATPFRSQRSDGTPMNSFNTPGGASARTQNGVLAATPVRDKLNINPDENLDGSETPLIQTQARNSLRTVLSSLPAPCNDYEIDIFDGEINDENISAPATDIIEDQADIDARQQQELLEEKKIAATAVKFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01268963; iTF_00302956; iTF_00684723; iTF_00182553;
- 90% Identity
- iTF_01268963;
- 80% Identity
- -