Basic Information

Insect: Atta cephalotes
Gene Symbol: JARID2
Assembly: GCA_000143395.2
Location: NW:5870042-5879863[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.5 4.2e+03 -2.6 0.2 57 82 151 178 130 180 0.58

2 3 1.4 2.3e+03 -1.8 0.0 38 65 1104 1130 1097 1141 0.81

3 3 4.2e-23 7.1e-20 70.4 0.0 6 89 1345 1426 1341 1426 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.5	4.2e+03	-2.6	0.2	57	82	151	178	130	180	0.58
2	3	1.4	2.3e+03	-1.8	0.0	38	65	1104	1130	1097	1141	0.81
3	3	4.2e-23	7.1e-20	70.4	0.0	6	89	1345	1426	1341	1426	0.94

Sequence Information

Coding Sequence: ATGGTTTTGAGTCGTAACgataaaagaaagaggaaggaaGGAGATCTGGTAGACCTCATGGAACCACTTTCGGAATCTCCGAAAAGgACCAAAGTTCATGCACAAAGAAAATTTGCACAAGGTGCGATCACTGTGTTTAATACATCACCTACACCTATCAAGGACAAAGAAAAAGCTAAACCTACTACAATCACAGAATTAATAACTCACAAACGACCAAATACAGaggattttttaacatttttatgctTCAGAggAACATCTATTTTGCCacctaatttaaattttttcaatactggcaacaaaaaagagaaacaaggATCTAAGCCAACTCAAACTTTTATAGAGAAGACATTGTCCTCTACTAGTACTTTCATAGAAATTCAGAAGCATGAAAATACatgccaaaaaaatttgacgaaAATAAAGCCTATtgtttcgaataaaaaaaaagtaactagTGCGttgcacaaaaatattacCAAACTTAAGACAACTACATCTACGGTTCAAGcacttaaaaagaaatatcaggAACAACGCCTTGCTAAGCaaagaatcaaaaataaatttaaagctaCTTGCGTTATGAAAACAAGATCATGTACAGAGAGATCTATGCTGAAGGCTGGTCTTAAGTTGACACCGCGAAAATTTTTACCTAAAATCAAGACAAAGAGGCATGGCCTAAGAAGTAGTGTACTACCAGAGAAAACCAGTAAACCTCTATCAAAAGCAAAAGTTACGTTATCCAAACCAAAGAAGAAAGTCAatctaaaatcgaaaaatagtGATACTTCGAATATAGATGCGTCATCCGAAGAAGATAATGATGTCGATGACAATCAAGGGGAAGAATTACATATGGAGAAATCAACATCGCAGATAAAGCGAAACATACAAAGAGGCatccaaaaaaagatttgcacTAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCGTCCAGTGGCATAGTCTCTTCACAAAATCTTTCCAGAAGGCCTACCAGAAAAACAAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGGAGAAAACTAGTGAGTCCGGATTTAGAAAATGATGATAACGTTTCATTTGAAAGCTTTCCCGAGCTACCAAATGCTCGTAGAATAACGCAAACGGAGAATGAACTTAAAGCCaaagtaaaacaaaatagTATCAAGACTATTATTAAAACCAAGGATTCTAAAGTTAGTTCTTACAATAGTAATGCTAATAAGCGATTGGATAAAagcaaaaacaataaattgattttaaagagCAAACGTCTGATGAGGGTACAGAAATATTGTGAAGAGGATAGCGACGAAGAATCTGAGAGCTCAATAGAAACGAGCAATTCGAGACCTATTACTAGACAGAGTCTTGGAAAGATTGATAAACCAAGCAGGAGCCTTAGATCATCCTCCAAAAACACAACAATACAAACAACTatacaaaataacataaatagcAAACCGAAAACTCAAATTCAAAATAGTGTGAAATCGGCTAGGgaaaaatttgtgataaaacGTAAAcgcgagaaaaatatatgtaaaacgtCGTTGGATAAGATTAAGCAAAAGAGCCTTAAAAGTAATCAAAATGAGAAGGGGGAATCAGAAGAGGAGACATTAGGAATGCTGCTCAATAAAataaggaagaaaaaagacaatgaggaggaagaggaagggCAAATCCctgacaatataaataatctgaaAGATAAAAAGGCAGCTTGCAGTGACATACAAAAAACAGCTGATCTGTCGAAGGTATCAGATGATGAGGAATCTTTTCGAGGGTTTACTAAGAAGGCGATATCAAAAGTTTTGAATTCATGTCAGACGCATGCCAATGTTAATTTGCTAGTCACAGAATCTGATAAAAAGTTGAATTTACCCAGAACATTGGATATATCACAAACAGCGCAAATAGCAAATCAAAGCGCCATTTTACGGAAAAATAAAGTAGAAACATCACCGATCAAAGACGATTTCTCGATTGCAAATCCGCTGAACGGTGAATGCGATTTATCTGTACGGGAAAAATCTGTATTGGATTTGTCCGTCAAGACCCAAAGCTTATTGTTGCCATCTGTAGAACAGACGAGCAAAAAATGTAATCGCGAAAATGAGGTTTCTTCCTCAAATCTTATGCCACTGTCCACTCTGCACACAAGAAAAGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGTTGAACGAAAGTTCGTTTGCTAAAGAAGAGAGCAAGCTGGAAATGGAAAACGTTTCCAGTTTTAGGTATGATTCTGCAGAAAAGTTAAAGGCGGATGTCTCGCATCTGTCTATTTCGACGAAAATCCAACATTTGGTACGCCCAGTCAACGTTACACTTTCGAAATTATCGGATAAGACGAATTTGAAAGATCGTATGGGGATACACAGCAAAAATGTAATACCGATAACATCTGATACCGGTAATATCCGTAATTCTGGAGTGAAGCAACAAAATGCGacaaatgttgataaaaataagagcaCTATCGAAATGAAAGAGATTGTCAAGAATAAAATTGGGAAAACGAACAAAGATACTTCTTTTGCTGAAGATATTAGCGACACTATGTCTAAAACGGATCAAAATTCCGTAGTAGATGATACTGTAGAAAAGAAGTCGCCAacagagaagaaaatatttcaaccgCGGAAACCTTTTTTGCCCAAGGTTAAGGAACGTAAAACTGTAATACCGAATGCAAATGCGTTTTCGCCAGAGAACGAGAGCAGCGTTTATGCGTTTGAAAGTGAAGCTGAAGTTCCTGTTAGCACACCATTCCGAAGAAAGATCAGAGATAATGCAAAACATTCGACTGCGGTAACACCATCACCTACAGAGATTATAATATCTGAATCCAAAGTAATTGCTAACAAATCAAGTTTGAAGGATTCTAAATTATTGGATAGCAAGGAAAAATTGTCGAACGATTCCATAACGACTATAAAGAAAGAACAAGAATCGCAAGGACCAAAGAATATAGCAAATACAGATATAGGCGTGAGCAAGTTTGAATTACCTAACAATTTTGCAAACTTGACCACTGTCCAAGTGCTACCACTCGACAAACTCACGACAAGTTGGAGTAACGTAAATTGCAGTGCTTCCATAGCGGTGCAGGTGAATCTCGACGAGACCACACAGGAACACGAAAACAATACGAGTCAACAGAAAAGTACTGAGATATCTACTCAAACCGAAATGAGTAACGAAAATGATGACGACAACGATGgacatctattttatattccgTTACAGGCTGTTACGAGAGGCGGCCCAAATCTGGTACAAGGTCAACAGTTAATACAGGGTGTGGCTGTTAAACTCGGTACGGAAGGACCGACCGGCCCTAATCAAAGAGTTCTCCTTCGAGCTAAGTTGGTCACTAAGCCACCGTTATCAGTGGCACGTTGTCCACCGATAGGAACAGTACAACCGACAACACGTACTCCACCTAATCCTGCAGCAATGACAGTGGAACAGCAAATATCATCAATGTCAACGACCGCAACTGTGTCAACCACGATAGCAAGTATGTCGAACAGTATGGAGATGCAATCAACTGCTAATACGATCATAAATAGCAATTCAACTGAGAAACTCACAAAATCACCTAAGTCTAGGGAAAGAAAAGCTTCTATAGATTCGACAAAAAGCGGAAAGAGaacACAAATGAAATGCAAACAAAAGGGAGAATTATCTGCTTCAAGCAGCACGACATTTCTAGGCGCGAAAATCGCGAATGATGAAGCTCGCGTGGTCGAGGCGCCAACGTTTCATCCGACGGAGAAAGATTTCCAGGATCCATTGGAGTACATAGATAAGATAAGACCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAGccAGAATGCAAGGTATCTGATGATATGAGATTCACCGCTTATAATCAATATGTACATCGCATGCTACACAGATGGGGTCctaatgtaaaagaaatgatggctattaagaaatatttagctACTCAGAGTATTACTTTGACTCAACCACCATggATTGGTGGAATGGAGGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTGGGTGGATTGAAAGAagtaattgagaaaaaaaagtggCAAAAAGTAGCAGATGGTATGAAAATACCGAAATCAGCACAGGATCGTGTTACTAAGCTAgatgatatttattgtaaatatttattgccaTATGATACATTATCCCcagaggAACGTGGAAAGTTGTTTGACGAAGTTGAAACTGaatggaaaagaaaagaaagcaaAGCCTTGCAAAGGCAAGAAGTATCATTTAATGATAACGATGAGGAAGAGGATGAAGACAGTTCTGATGAAATTGAAGAATGTATCGTAAAAGGAAGAAATATGCCATTGAATGCTTTTTATCGAATTGCCCGTAATACTCAACGTATGTGGTTCGGTGAAAATCAACGAGGAAATGAAACCGAGGGTGCTTCCGCCAACGAGGTAGAGAGTGCATTTTGGAAACATGTTGCCGAGAGAAAACGTCATGTCTGCGTACATGCAGCAAGCATTGATTCGAGCGGTCGTGGATTTGGATTTTCGGTTGCAAAAAACAGTCCATTTGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATCCTGGATCAGTATTAAGAGCTTTGGGTCCACTAATGGGTGTGACAGTACCAACATTGCATGTGGGTATGTTATTTAGCGCTTGTTGTTGGTATCGTGATCCGCATGGTCTACCATGGATAGAGTATCTACATACAGGtgctaaaaaaatttggtatGGAATACCTGATgagcataataataatttccgaAAAGCGCTCTCGAAAATGGTAccacaatattgcaaaaataagacTATATGGTTACCTTCTGATACTGCTATGGTTCCGCCGGAATTATTAGTGAGCAACGATGTACCATTATGTCAGACTGTGCAAGAGCCAGgacaatttataatagtatttcCAAAAGCTTTCACATCAAGCATATGTACTGGTTATGTTGTATCTGAAAGCGTATATTTCGCACAACCATCCTGGTTAGAAACTGCAGAACAAGTATTTAAGgatATACAAGATAGTTGCGAACCttctattttttcatttgagagattgttatttaatattattaatgatacgaGATCGCACATAGATATATTGAAACAGatattgccGAGTGTAATAAAGATTtgtgaaaaagaattaaattatcgtaAACAGCTGGAAAGTATAGGTCTTATCAATAAAGAAAGATTGCCTTTACCAGTTAGTGGAAAAgggaagaaaggaaaaaaggtGAAAGATGATGATGGCGATTTTGAATGTGAGACATGTAGAGCTAATTTGTTTGTCTCTTTGGTAAATAATTCGCAAGATGACAGCGTTTATTGTTTGCCGCATGCCTTGCACTTAATTAGTTGTAAGAAGCAGATTTTGAAACATTGTACTCTCATGTACACGTATGATGAAgATGAATTAGACGAGTTGATTCACAAACTGGAAAACAGAATTGAAGCCAAATCTAAAAAAactaatcaaataaaacaaaataagcaagaaaaataa
Protein Sequence: MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGAITVFNTSPTPIKDKEKAKPTTITELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNTGNKKEKQGSKPTQTFIEKTLSSTSTFIEIQKHENTCQKNLTKIKPIVSNKKKVTSALHKNITKLKTTTSTVQALKKKYQEQRLAKQRIKNKFKATCVMKTRSCTERSMLKAGLKLTPRKFLPKIKTKRHGLRSSVLPEKTSKPLSKAKVTLSKPKKKVNLKSKNSDTSNIDASSEEDNDVDDNQGEELHMEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSSSGIVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSFESFPELPNARRITQTENELKAKVKQNSIKTIIKTKDSKVSSYNSNANKRLDKSKNNKLILKSKRLMRVQKYCEEDSDEESESSIETSNSRPITRQSLGKIDKPSRSLRSSSKNTTIQTTIQNNINSKPKTQIQNSVKSAREKFVIKRKREKNICKTSLDKIKQKSLKSNQNEKGESEEETLGMLLNKIRKKKDNEEEEEGQIPDNINNLKDKKAACSDIQKTADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVTESDKKLNLPRTLDISQTAQIANQSAILRKNKVETSPIKDDFSIANPLNGECDLSVREKSVLDLSVKTQSLLLPSVEQTSKKCNRENEVSSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSFAKEESKLEMENVSSFRYDSAEKLKADVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRMGIHSKNVIPITSDTGNIRNSGVKQQNATNVDKNKSTIEMKEIVKNKIGKTNKDTSFAEDISDTMSKTDQNSVVDDTVEKKSPTEKKIFQPRKPFLPKVKERKTVIPNANAFSPENESSVYAFESEAEVPVSTPFRRKIRDNAKHSTAVTPSPTEIIISESKVIANKSSLKDSKLLDSKEKLSNDSITTIKKEQESQGPKNIANTDIGVSKFELPNNFANLTTVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEHENNTSQQKSTEISTQTEMSNENDDDNDGHLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPPNPAAMTVEQQISSMSTTATVSTTIASMSNSMEMQSTANTIINSNSTEKLTKSPKSRERKASIDSTKSGKRTQMKCKQKGELSASSSTTFLGAKIANDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVETEWKRKESKALQRQEVSFNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNPGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRKALSKMVPQYCKNKTIWLPSDTAMVPPELLVSNDVPLCQTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKICEKELNYRKQLESIGLINKERLPLPVSGKGKKGKKVKDDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALHLISCKKQILKHCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQNKQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423428;
90% Identity: iTF_00015841;
80% Identity: -