Adix017772.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- clz9
- Assembly
- GCA_018248015.1
- Location
- DWHX01006005.1:7750-9450[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7e-09 4.7e-06 27.8 0.0 2 41 16 56 15 59 0.88 2 3 6.3 1.8e+04 -2.9 0.0 33 45 129 141 127 141 0.82 3 3 3.3 9.3e+03 -1.9 0.0 27 37 419 431 419 433 0.69
Sequence Information
- Coding Sequence
- ATGCCACCAAACCGCAGTCAAAAAGTTCAAAAATCAGTTGAGCAGGAAGGCAGGATATTGCTAGCCATTAAATCAATTCAAAATGGCAGGATTAGCACaattgctgctgctgctcgcTCTTTTAATGTCCCTCGCACTACTCTTGCAGATCGGATAAAAGGCATTCCTAATCTGTATGAAGCAAGGGCTACAGGCCATAAATTCACGCAGCTAGAAGAGGAATCAATTCAGGATTGGTTAATCTCTATGGATCAGAGAGGTGCTGCGCTTACGATTGCTATGTTAAGAGATATGGCCAATCTACTACTTCAACACCGCGGAGATCATACCCCCCAGACTGTTGGCAAAAATTGGCCAACACAATATATCAAACAACATCCTGGGCTTACTAGTCGATTCTCTCGCAAATATGACTATAAACGCGCCTTAATGGAAGACCCAAATACCATTATTGAGTGGTTTAAGCTTGTCGAAAAAACGATTTCTCAATATGGTATCACTTCAGATGATATCTACGACTTTGATGAATCAGGGTTTGCGATGGGAGTTAGTGCAACAACAAAGGTTATTACACAGTCATTTCATACTGGTCGGAGGGGCGTTTTGCAAGCTGGCAATCGTGAATGGGTGACTGTTATTGAATCAATTTGCGCCTCCGGGCGAGCGCTCCCACcatatattatctttaaaggAAAGAACTTTATGGTACGATGGTTTGACAACCTTCCAAAGCATTGGGCTCTTAATGTTAGTCCAAACGGCTGGACTAGCAATGAAATTGGTGTTGATTGGCTCCAAAAGCACTTTATTCCACATACAATAAGCCAGACAAAAGGGAAACATTGCCTTTTAGTCCTCGATGGCCATGATAGTCATCTTACAGCAACATTTGACAAGATTTGCCaggaaaacaatattattccAATCTGCATGCCTCCACATGCCTCTCATCTTTTACAGCCGCTTGATGTTGGTTGTTTTGCTGTGTTAAAGCGCTCTTATGGAAGGCGGGTTGCAGAATATACCCAATTAGGCATTGATTCTATTGAAAAAGATGACTTCCTTGATATCTTCCCAGCGGCTCGTGATGATTCATTCAAAGAGTCTATCATTCAAAGTGCCTTTGCAGCTACTGGTTTAGTACCATTAGACCCTGATCGGGTGTTATCAAAGCTCAATATTCGCCTTCAATCTCCACCTCTACCAGATCGACCAGTTTCACAAGGTTCAACATCAGGTAGCAATATCTCTGCCGGTATTCCTCGAACAACTAAGCAGCTAGAAAAACGCAAATCTAGGCTTGATTCTGGTCTAATTTCAGCTTCTGATAAGATCTCTTCACCTACAAAACGTGATCTTCAACAGTTTTACAATATGTCTGTTAAGCTAGTTCACAAACATGTCTTAATGCGGGATGAAATCAAGTGTTTGCGGGAGGGAAATAGAAAACAGATGAAAAAAAGGGAGAAATCAAAGAAGAGAATGCCTAATAGAGGTAGTTTAACAGAGGCTTTGGACCTTACTACCAATGTTGGTGGAGAGGGAGGTGTTGGTGCGAGATATATATCTGAACCTGCACCTGCTCCAGAACCCCAGGTTGAACCTACACTTCCTATTTTGCCCCCTGTACGTCGGCAAATTACATGTTCTAAATGCGGAGTAAAGGGGCATACTTATACTAAATGCCCGCAGAAGGGTTAA
- Protein Sequence
- MPPNRSQKVQKSVEQEGRILLAIKSIQNGRISTIAAAARSFNVPRTTLADRIKGIPNLYEARATGHKFTQLEEESIQDWLISMDQRGAALTIAMLRDMANLLLQHRGDHTPQTVGKNWPTQYIKQHPGLTSRFSRKYDYKRALMEDPNTIIEWFKLVEKTISQYGITSDDIYDFDESGFAMGVSATTKVITQSFHTGRRGVLQAGNREWVTVIESICASGRALPPYIIFKGKNFMVRWFDNLPKHWALNVSPNGWTSNEIGVDWLQKHFIPHTISQTKGKHCLLVLDGHDSHLTATFDKICQENNIIPICMPPHASHLLQPLDVGCFAVLKRSYGRRVAEYTQLGIDSIEKDDFLDIFPAARDDSFKESIIQSAFAATGLVPLDPDRVLSKLNIRLQSPPLPDRPVSQGSTSGSNISAGIPRTTKQLEKRKSRLDSGLISASDKISSPTKRDLQQFYNMSVKLVHKHVLMRDEIKCLREGNRKQMKKREKSKKRMPNRGSLTEALDLTTNVGGEGGVGARYISEPAPAPEPQVEPTLPILPPVRRQITCSKCGVKGHTYTKCPQKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -