Adix010797.1
Basic Information
- Insect
- Atrophaneura dixoni
- Gene Symbol
- clz9
- Assembly
- GCA_018248015.1
- Location
- DWHX01003047.1:332-2002[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-10 1.3e-06 29.6 0.0 7 41 21 56 15 59 0.88 2 2 4.7 1.3e+04 -2.5 0.0 14 22 493 501 490 502 0.82
Sequence Information
- Coding Sequence
- ATGCCACCAAAATCGCGTGCAAAGAAAAAAGACCAAGTTGAACAAGAAGGAAGGGTCCTACTTGCCATCTCATCcttaagaaagaaagaaattaccAATATCCGCGAAGCTGCACGCCTATATGATGTACCTCGGACTACACTACAACGCCGATTGAATGGCAGTACAAATCGTGCTGAAAAACAAGCCAATGGccttaaattaacaaaagaagaagaggaatCACTTGTTCAGTGGATACTATCCATGGACCAACGTGGAGCAGCTCCCCGGCCGTCTCATATTCAAGATATGGCCAATATACTTCTTTCCAATCGTGGTTTATCCAACATCCAACCAATTGGCCAGAACTGGGTGTATAAATTCATCAAACGTCATGATCAATTGAAGACCAAGTTCTCAAGAAGATACAATTATCAGCGTGCTAAATGTGAGGATCCAAAGCTTATCAAGGAGTGGTTTGACCATGTACAAATCATCATAATGCAGTATGGGATTGCATATGAAGACATCTACAATTTTGATGAAACTGGTTTTGCTATGGGCCTTATTGCTACTGCCAGAGTAGTAACCAGAGCTGAAACTGTTGGTCGTCCTGCCCTATTGCAGCCTGGAAATCGTGAATGGGTTACTGCAATTGAGTGTGTTAATGCTATGGGGTGGGCTCTGCCTCCATGCATTGTATTCAAAGGAAAGTCCCATATACAGGCCTGGTATGAAGATGATGCTCTGCCACATGACTGGAGGATTGAACTCAGTGACAATGGATGGACAACTGATCAAATTGGTCTTTCCTGGCTTCAGAATATCTTCATCCCAACCACAAATGGTCATATGACTGGAAAATACCGCCTTCTGATCCTTGATGGCCATGGGAGCCATTTGACACCACAATTTGACCAGATATGCAATCAGAATAATATTGTGCCAATTTGCATGCCTGCACATTCATCTCATCTTTTACAGCCTCTTGATGTTGGCTGTTTTGCAGTCTTGAAGCGCACTTATGGCCGCTTGGTGGAAGAGAAGATGCGGCAGAGGATCAATCATATAGACAAGCTTGATTTCCTTTCAGCATATCCACAGGCCCGTAAGGAAGCCTTTAAAATGGATAATATCAAGAATGGCTTCGTGGCAACTGGCTTGGTTCCATACAATCCAGAGAGGGTGTTGACACAGCTTAATATATATCCAAAGACTCCTACACCTCCTGGGAGCCAATCCACCAACTCTGATCCAAAAACACCTCATAATCTCAAGCAATTGGAGAAGCAAGCTTCTACCATCAAGAAGCTACTAAAAAGGCACTCTAATAGCCCTCCAACCCCCACCAAGTCTGCAATGAATCAACTTGTTAAGGGTTGTCAAATGGCCATGAATAGCGCTACAATACTGGCAAAGGAGAATCATGATCTACAGGCTGCAAATGAGAGACAGCAGCAGAAAAGAAAGCGATCTAATAGGCAGATAGCCTATACAGGAGGCCTTTCTGTTCAGGAAGCTCATGGTATCATACAAAGTGAGAATAATGCCCAAGAAGCCTCTACTACCATACCTGGCGGACCTGCTTCAGCAACAAACCAACCATCTGTACGGGCACCACCACGGTGCAGTGATTGTCATATTATTGGACATAGAAGACTGCAATGTCCTAATCGCAATAGagcttag
- Protein Sequence
- MPPKSRAKKKDQVEQEGRVLLAISSLRKKEITNIREAARLYDVPRTTLQRRLNGSTNRAEKQANGLKLTKEEEESLVQWILSMDQRGAAPRPSHIQDMANILLSNRGLSNIQPIGQNWVYKFIKRHDQLKTKFSRRYNYQRAKCEDPKLIKEWFDHVQIIIMQYGIAYEDIYNFDETGFAMGLIATARVVTRAETVGRPALLQPGNREWVTAIECVNAMGWALPPCIVFKGKSHIQAWYEDDALPHDWRIELSDNGWTTDQIGLSWLQNIFIPTTNGHMTGKYRLLILDGHGSHLTPQFDQICNQNNIVPICMPAHSSHLLQPLDVGCFAVLKRTYGRLVEEKMRQRINHIDKLDFLSAYPQARKEAFKMDNIKNGFVATGLVPYNPERVLTQLNIYPKTPTPPGSQSTNSDPKTPHNLKQLEKQASTIKKLLKRHSNSPPTPTKSAMNQLVKGCQMAMNSATILAKENHDLQAANERQQQKRKRSNRQIAYTGGLSVQEAHGIIQSENNAQEASTTIPGGPASATNQPSVRAPPRCSDCHIIGHRRLQCPNRNRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -