Basic Information

Gene Symbol
atf1
Assembly
GCA_018248015.1
Location
DWHX01001238.1:1-2284[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-17 2.6e-14 54.5 6.6 2 65 416 479 415 479 0.96

Sequence Information

Coding Sequence
cACAGACAGATCATCATGTCTGCTGCTGTCGCCCCGACTGTCTCGACCAATCTGGCAGCAGCAAATAATACCGACTCTACTAGTAATTCCTCCCCGATGGACTCGAAAAAGAACGAAGACTCAAGGACCCAGTCTTCAGACAACAAAGACCAAAAGTCCGATGTAGAATCGCAGGCTTCGTTGGCGCCTCCCCCTCGACCCGCCGCCGCTGAAACCCCGGATTACTTCAATTCCGTTCACAACCCTTTCTCCCTCGAACCCAATCCGTTCGAGCAGTCGTTTAGCGGTGGTAGCAACGGCGGTGCGGGCGGCGGTGCTTCGAGTGAGACCCCCGGCAAGTCGCTGCTTCCTCCCGTCGCGGCGCTTGCCTCTCCTGCCCTACCCACCAGCAATCCCAACACTGGTTACAACTGGGCCAACTCCCTACGCTCCGGTCCCTTGAGTCCCGCCATGCTTGCTGGCCCCACTGGTGGCAACGATTATTTTGACAGTATCGGTCGCGGTTTTCCCACTCCCAACGAATCCTCTCTTCGCACAGGATTGACTCCTGGCGGCGGTGGTTCGATGTTCCCCGCGCCCAGCCCCAACTCTCAGGCCCTATTTCAGCAACTGCAAAGCGGCGGCGCAACTCCCTCGACCATCGAGTTCCACCGCACTGCACTCAACGCCGCCAAGAAGAACGGAATGGGTGCCCCTACATCCAACCCAACCACCGAACCAGAGCCGCAGGAAACCAAGCCAACTACCATGGATGCCAAAGAAAACCAACCCGCCGCCGTAGACCCGTTCACTCACCATGATGCTGCAGACGCCGCCAACGGACTGTTTATGTTAGCCAAGGGTGGCCAACAGAATTCTAATCAATTCCAAGCCTCGAACCAGTCTTCGATACCACCGCAAAGCATGCAGAATAACGAGCAACGACGCGACTCGGGTCCGAACACCAGGCGATCGTCGCAGCATATGAACGGTACCGCGGTGAATAATAATGGTCGCGAAATGAGTGCCGACGGGTCCGATTTTCAACCAGAGCCAGCGAAGCCCGCTGGCAAAGGTAAGGGCAAAAGGACTGCCAGCACAAAGGCTGGAAATGCGGCAACTCGACGAAAAACGGAGGACTCGCCTGCAAAGGGTAACAAGAAGTCCAAAGCCAACAGTGGATCTGCCAGCATGGAGCCACCGTCTGAACCTGAATCGGAAGAGGATGACACCCGGCCTCAAGGAGATCCGAAGAAGATGACGGATGAAGAGAAACGACGTAATTTCCTTGAACGAAACAGGGTCGCTGCTCTTAAATGTCGACAGCGGAAGAAGCAATGGCTTGCCAACCTTCAGACCAAGGTTGAATTGTTTACCTCCGAGAATGATGCGCTTACGGCAACTGTTACTCAACTGCGCGAGGAAATCGTGAACCTCAAAACCTTATTGTTAGCCCATAAGGACTGCCCTGTTTCTCAAGCTCAGGGCATCGGCCCCTTGATGATGAACGGGATGTCCTCCGGATTCGATCCACATCCGTATAACATGCCTAACAACATGGGCATGCAGCCCGGTGCGCCCATGGCCGTTCGTCGGTAA
Protein Sequence
HRQIIMSAAVAPTVSTNLAAANNTDSTSNSSPMDSKKNEDSRTQSSDNKDQKSDVESQASLAPPPRPAAAETPDYFNSVHNPFSLEPNPFEQSFSGGSNGGAGGGASSETPGKSLLPPVAALASPALPTSNPNTGYNWANSLRSGPLSPAMLAGPTGGNDYFDSIGRGFPTPNESSLRTGLTPGGGGSMFPAPSPNSQALFQQLQSGGATPSTIEFHRTALNAAKKNGMGAPTSNPTTEPEPQETKPTTMDAKENQPAAVDPFTHHDAADAANGLFMLAKGGQQNSNQFQASNQSSIPPQSMQNNEQRRDSGPNTRRSSQHMNGTAVNNNGREMSADGSDFQPEPAKPAGKGKGKRTASTKAGNAATRRKTEDSPAKGNKKSKANSGSASMEPPSEPESEEDDTRPQGDPKKMTDEEKRRNFLERNRVAALKCRQRKKQWLANLQTKVELFTSENDALTATVTQLREEIVNLKTLLLAHKDCPVSQAQGIGPLMMNGMSSGFDPHPYNMPNNMGMQPGAPMAVRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01496286;
90% Identity
iTF_01496286;
80% Identity
-