Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388321.1:18620175-18632172[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0017 0.19 13.7 1.9 1 23 1470 1492 1470 1492 0.99

2 7 0.00039 0.043 15.7 4.4 2 23 1499 1521 1498 1521 0.94

3 7 0.00062 0.068 15.1 1.4 1 23 1527 1549 1527 1549 0.98

4 7 8.7e-05 0.0095 17.8 1.7 1 23 1555 1577 1555 1577 0.98

5 7 4.5e-05 0.0049 18.7 4.7 1 23 1583 1605 1583 1605 0.98

6 7 0.0021 0.23 13.4 2.6 1 23 1611 1633 1611 1633 0.97

7 7 0.00019 0.021 16.7 2.7 1 23 1639 1662 1639 1662 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0017	0.19	13.7	1.9	1	23	1470	1492	1470	1492	0.99
2	7	0.00039	0.043	15.7	4.4	2	23	1499	1521	1498	1521	0.94
3	7	0.00062	0.068	15.1	1.4	1	23	1527	1549	1527	1549	0.98
4	7	8.7e-05	0.0095	17.8	1.7	1	23	1555	1577	1555	1577	0.98
5	7	4.5e-05	0.0049	18.7	4.7	1	23	1583	1605	1583	1605	0.98
6	7	0.0021	0.23	13.4	2.6	1	23	1611	1633	1611	1633	0.97
7	7	0.00019	0.021	16.7	2.7	1	23	1639	1662	1639	1662	0.97

Sequence Information

Coding Sequence: ATGGCTGATGAAGACGCAACACGGCGTATGGAGACGCTGCtggcaagacaagctagctctaaagacttgcccgtcttcactggtggtgccttagaatgggacaacttcaaggcgcaatatgaagaatctacaaggttgtatggaatgacagctgccgaaaatcgaatgcgccttcaacgggccctgaaggggtacgcccgtgagacagtaacagcgatgctgCACAGAAAGGACATCGATTGTGAAGCGATTATGAGATTATTAGACGAAACGTTCGCCGGACAGACGAAACTTTTGAATGGATTGAGTGATAAACTGAAGAAATTCCCGCCGATGGGTCCTAGTGCCCCTGCTACCTATCGTGAATTTAGTGCCTTGCTTCAGAACATTGTTGTAGTGTTAGCTGACATTAGTGAAAGTCGGCTTAGTGATCCAGACGCTCTTATGCTAATAGTGTCAAAGCTACCTCAGTGGCAACTCGCTATGTGGTCTACAGAAGTTATGCGAGAACGTAGAGCGGGTCGATATGCGGAACCGACAGTTAGACAGTTTGCGGAATTCTATAGAGAAATGTGTATGAGCTTGAATAACATTGGATTAAAAGTGAAAGAGGGGAAAACCGCGCAAGTGTTTAATTTGACTGAGGTCAGTGAACTTTGGAACGAATGTGAAAGTGTAGTTAGTGCTTCGCTAGAACACGAATCACCGCAGATAGACAATGTACGAGAGAAAGATCGCACGATCACGAATGGTTGTGTACAATGCGGAGAGGATCACAAACTCTCACAGTGCCGAGCTTATATGAACAAAACCGTAGAAGATAGATGGGCACTTGTTAAAGCTAGCCGTCTTTGCTTCAACTGCATCACAGCAAGACATCCAGCTGCAGGCTGTAGAAAGCGACGCTGTGGCATCGAAGGATGCAAAGCGGGACATCATTCATCGCTCCACAAAGTGCAAAGTGAGATAGTGACAAACACGTGGAGAGACGGAACTCCGgtgtttctgaaagtggtaccggtagtgttaagtggacctaaaggatgtgttaagattcacgctcttcttgatgaagggtcaacagtgacattagtggacaaTGCAGTGGCTGACAGTGTGGGTGCCCGTGGCCGAGTGAGTGGACTCAAACTAAAGGGAGTACATGATATGCGGGCGGCAGACAGTGCATCGCGAAGAGTGAAAGTCGGTGTAGCCGGTGACAATGGGCACAGTTACACAATTGTTGCGCATACGGTGACACAGCTGTTACTTCCAGAGCAATGGATGGCACGCAGCCGAGAAGATGTGCGAGCTCCTGGAATAAGGGCATCTCTAGTAAAACCCCTAATACTGATTGGACAAGACAACGCCCACTTAGTTGTGAGTAGAGAAATTCGAGAAATGGCTGGAGACAGTGTGATCATGTCTAGGACTGCTTTGGGGTGGACTGCTCACGGTGGTTCAAACTTACCAGAGATAGCCTACACCCTGCACATCAACCGAGATgacgacttgaaccaaaagttaaaagatcatttcgcagttgattctcttggagtcacagcagcctgtagaatacccttggaggaacgaaaggcaatggaaattatgaatagcactacccaccaactacccaatggacagtggtcaacgggtttactatggaaagagatgagatgtgcactcccagataacagggtatgcgcgctaggaagattacaatctttagaaaggaaattacagcgtgaccccatcttgaaggaggcatacgtaagaaaaattgaagaaattgtcaataaaggatacgcagtccgtgtatcggaagtgcagccgcatccacggcaatggtatctaccacactttgctgtattgaaccccaataaacccgggaagataagaattgtttacgacgccgcatgcaaattcagaggtgtatcacttaacgacaaattactgactggacctgacatgctgacgtcactctgggggcacatcatacgattccgagaaggtgggtttgctgtggcagccgacatacgtgaaatgttcttacgtataaaaatagaccaagaagaccaagaatctcaacgttttctctggaggagtgaccctaatggtgaaatcgagacataccgaatgacatcaatggtatttggcgcatgttgttctccggcaagtgctcaatttgtacgcaatgcagtcgcaggtgccaaagaggcagagtatcctgaagcagctacagccatccgaacgagtttttacatggatgacttcctactagcaagagatagtgaagaagaagcagcaacgttagcagtgcaagtgaaaaccgtactggctagtgggggtttcgagttgacgaattgggcctctaacagtgttcctgtgcataaaattgttacgggactagaagctaacgatacaccagttaacattgaaataggggtaaaaaccgaagaaaggatactaggggtacactggaacccccagatggatgctttcatatacactttggagtctacagctatcggagaaccatggcccaccaaaagggagttactaagtgctgtgatgggtgtttttgacccattaggattcatttcttgcatagtcatcagatcaaaagtcctcttgcagcaagtttggcgctctcatattgattgggacgaaaaactgaaaccagaacacgccctcaaatggcaagaatggttgaagatgataaaggaagtccagtgcaaaataccacgacgttgtcgtcgcagtagaaactctgatgcagaaattcacgtatttggcgatgcctcggaagaagcttgttgcgtggtagcttacttgcgagaagaggataatacaggggtgcatgtaacatttttgggtagcaagtgtaaggtggccccacttaaaccactttcaattcctagactggaactacaagccgcactgatggcggcaagactggcgaaagcattgaaggaacagatgaccagccgagtagtaagaatggcctattggacggattctactaccgtcttaagttggatccagtcagacccacgatgttactcaacctttgttgctaatcgactgggagaaatcgacgagcttacaaaaacaagtgaatggaggtgggtgcctacaggagaaaaccctgccgatattgggacccgagatctagaacctcccaatatgacaccatcaggaatatggtttagtggcccggcattcttgagagaaccctcgtcagagtggccacaacagcaaatacccactccTATCCATGGACCCGAACTCCGAAAAGAATACCTAACGGGAAACGTGATTGAGGAAAAATTCAAACCTGATGGTCTACCAGATGTCACTCGATTCTCTTCATGGGAGAGGCTGATACGCTCTACAGCCTGGGTCATCCGATTCATTGAAAAATGCCGTAAGACGAGCACTGACAAAAAGGCATTGACAGTTGGTGAACTAAGGAAGGCTGAACATTTATGGATTCTAGCCTCGCAGGAAGAGGCCTTCCACGAAGATATCAAAAGGCTGAAGAACAAGCAAGCATTAAAGAAAGGAAGCCGTCTCGTAAGCTGGACACCACAGTTGCTCGAAGATGGGACACTAGTATCTAACAGTAGGTTGGTGGCCTTGTCCGAAGACCCGAAACAGTACAGTCAACTCCCAATCCTAGACGATTCCAGTCAGTTAGAGTTATCTCTGTTGTGCAGAGTGTGTGCCACACCTAATGAATATCTTATCCCAATATTTGAAGGAGAAGGGAAAGAAAATGAGTTGTCGGATAAAATACATTCACACCTTCCAATCAAAGTGAATCCAAATGATGACTTTCCTGACCAGATATGTTACCCATGTGCTAGTACTCTGCTAGCCTTTCATGATTTAGTGAAGTGTTGTGAGGAATCCAATGTGAAGCTCCAACATCGAATAAACAGCGGAGAATCTAGACATAAGAAATTGAAAGCGGCCTCCTCTACACCACAAGGAAAAAGCGTAAAATCAGAACGGCCTGTGCACTGTTCCTCCTCATTCAGTGCTCTGGTAGATGTTAAATATTTAGACAATGCCTCAGTAAACACAGTCAAACAACAAAAAGCTTCCAAACCATCTAGTGAACCCACTGAAATAAAAGAAGACCACCATATATTTGCACACGTAGATATAGAATCCGCATGTGTGGAAACTGATCATTTATCTAGTATTACTGTAAAGAGTGAGTCAGGTGAAACTACAAAACACATGGAACATGCAGTGAAAGATGAGTGTGCTAATCTAGAAGAGTCAGCTGAATTGACTGCATGCGGCGATCATGCAAGTAAAGGAAAGGCCAAACTTCACACAAGTGAGATGATGAAATTGTTGAATGATGCCAAAATGATGATAGATAATTTTGAGGTATACAGGTGCAAGGTGTGTGGTAAAGAAATGAAGTTTCCGCATGAATTTATCTCTCACCAGAGAATCCACACTGGGGAGAAGCCCAGCGTCTGCCACCTGTGTGGGAAAACATTCCGTCTCTCCAACTCATTACGCAGGCACATACACCAAACACATTACAAAATCAAAAAGTACTCGTGCAGCCTCTGCTCTCAAACTTTTCTCAATTCTCAGAATCTTAAAATTCATATGCGCCTTCATACATTAGAGACCCCGTACATGTGTACCTTATGCGGTAAACAATTCAAACAAAGTGCTTCTCTGTACATGCACTCTAAGACCCACACGGACGTGTATCCCTTCCAGTGCTCAACCTGTCCTGCAAGCTTCAGGACCAAATCTAACCTGACTCATCACAGGTACAAACACACAGGAGAGAGACCCCATGTTTGTGAGGTTTGTTCTCGAGGCTTTAGAATTAAACACGAGCTCAACAGACATCGTCTCATACATAGTGATGTAAAAGCTCACAAGTGTTCTGTGTGTAATATGGCATACAGACAGAAGCGTTACCTCACTGCTCATATTAAGAAGTTACATAAAGATAATGATACTGTCAGCAAGAAATGA
Protein Sequence: MADEDATRRMETLLARQASSKDLPVFTGGALEWDNFKAQYEESTRLYGMTAAENRMRLQRALKGYARETVTAMLHRKDIDCEAIMRLLDETFAGQTKLLNGLSDKLKKFPPMGPSAPATYREFSALLQNIVVVLADISESRLSDPDALMLIVSKLPQWQLAMWSTEVMRERRAGRYAEPTVRQFAEFYREMCMSLNNIGLKVKEGKTAQVFNLTEVSELWNECESVVSASLEHESPQIDNVREKDRTITNGCVQCGEDHKLSQCRAYMNKTVEDRWALVKASRLCFNCITARHPAAGCRKRRCGIEGCKAGHHSSLHKVQSEIVTNTWRDGTPVFLKVVPVVLSGPKGCVKIHALLDEGSTVTLVDNAVADSVGARGRVSGLKLKGVHDMRAADSASRRVKVGVAGDNGHSYTIVAHTVTQLLLPEQWMARSREDVRAPGIRASLVKPLILIGQDNAHLVVSREIREMAGDSVIMSRTALGWTAHGGSNLPEIAYTLHINRDDDLNQKLKDHFAVDSLGVTAACRIPLEERKAMEIMNSTTHQLPNGQWSTGLLWKEMRCALPDNRVCALGRLQSLERKLQRDPILKEAYVRKIEEIVNKGYAVRVSEVQPHPRQWYLPHFAVLNPNKPGKIRIVYDAACKFRGVSLNDKLLTGPDMLTSLWGHIIRFREGGFAVAADIREMFLRIKIDQEDQESQRFLWRSDPNGEIETYRMTSMVFGACCSPASAQFVRNAVAGAKEAEYPEAATAIRTSFYMDDFLLARDSEEEAATLAVQVKTVLASGGFELTNWASNSVPVHKIVTGLEANDTPVNIEIGVKTEERILGVHWNPQMDAFIYTLESTAIGEPWPTKRELLSAVMGVFDPLGFISCIVIRSKVLLQQVWRSHIDWDEKLKPEHALKWQEWLKMIKEVQCKIPRRCRRSRNSDAEIHVFGDASEEACCVVAYLREEDNTGVHVTFLGSKCKVAPLKPLSIPRLELQAALMAARLAKALKEQMTSRVVRMAYWTDSTTVLSWIQSDPRCYSTFVANRLGEIDELTKTSEWRWVPTGENPADIGTRDLEPPNMTPSGIWFSGPAFLREPSSEWPQQQIPTPIHGPELRKEYLTGNVIEEKFKPDGLPDVTRFSSWERLIRSTAWVIRFIEKCRKTSTDKKALTVGELRKAEHLWILASQEEAFHEDIKRLKNKQALKKGSRLVSWTPQLLEDGTLVSNSRLVALSEDPKQYSQLPILDDSSQLELSLLCRVCATPNEYLIPIFEGEGKENELSDKIHSHLPIKVNPNDDFPDQICYPCASTLLAFHDLVKCCEESNVKLQHRINSGESRHKKLKAASSTPQGKSVKSERPVHCSSSFSALVDVKYLDNASVNTVKQQKASKPSSEPTEIKEDHHIFAHVDIESACVETDHLSSITVKSESGETTKHMEHAVKDECANLEESAELTACGDHASKGKAKLHTSEMMKLLNDAKMMIDNFEVYRCKVCGKEMKFPHEFISHQRIHTGEKPSVCHLCGKTFRLSNSLRRHIHQTHYKIKKYSCSLCSQTFLNSQNLKIHMRLHTLETPYMCTLCGKQFKQSASLYMHSKTHTDVYPFQCSTCPASFRTKSNLTHHRYKHTGERPHVCEVCSRGFRIKHELNRHRLIHSDVKAHKCSVCNMAYRQKRYLTAHIKKLHKDNDTVSKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -