Acin001697.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Athripsodes cinereus
Gene Symbol
-
Assembly
GCA_947579605.1
Location
OX388318.1:25394086-25412208[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 1.2 1.3e+02 4.7 0.2 1 23 151 174 151 174 0.95
2 9 0.00014 0.015 17.1 1.6 1 20 728 747 728 749 0.95
3 9 3.8e-05 0.0041 18.9 1.3 2 23 777 798 776 798 0.95
4 9 0.003 0.33 12.9 1.8 1 23 805 827 805 827 0.96
5 9 3.9e-06 0.00043 22.0 1.1 1 23 838 860 838 860 0.95
6 9 1.1e-05 0.0013 20.5 0.5 1 23 866 888 866 888 0.98
7 9 2.2e-05 0.0024 19.6 5.4 2 23 895 916 894 916 0.96
8 9 2.9e-06 0.00032 22.4 1.2 1 23 922 944 922 944 0.99
9 9 0.0077 0.85 11.6 0.4 1 23 950 972 950 972 0.99

Sequence Information

Coding Sequence
ATGTGGGAGGCTACCGGAACTGTTAATCCTAATTTAGACTTATCCAAAGTGTGCAGGACTTGTATGAAGGAAAGTGAACATCTGATGTTTATGTTTGATTCTTATGGAAAATATGATAACCGTCCCTTAAATGAAATGTTCACCACTTGCACACAACTTGAGATTCACAAAGAAGATGGTCTCCCTGTTAAGATGTGCCCTCGGTGTAGTGAGTGTGTGGAGGAGGCCTACTGCTTCAGATTGCAAGCGGAGAGATGCAACACACTACTGAAAGATATAGTGACAAATAGGGCATTCAATAAGACTGTTGCAGACATAGAGATCAAAGAGGAGGTAGTTAAAGATGAAATTAACGATTATGATGGAGGAGGTATTGATACCACATACTTTTCAGATGATTCTGATGATGCCCAGCCCCTCAGCTCCATCAAGAAGCCTGGTGTTGTCTTGTATAGCTGTAAGTTTTGCGAGTTGAGCAGCACTGTTGAGGATGATATTCTGACACATCTGGTGACCTCTCACAGAGAGGAGTGTGGGCTGATGGGGAGCCGGGGACGTGGCAGACCCTCACAACAGGAGTTGGCTGACAGAAAGATGAGAATACAACGCTTATTGGATAATTATGTAAACAGGAGTGATTATGAGAGTAAAGTGGTGCTGAAGCTAGAAATGGATAGTAATAGAGACACACAAGATGATAGCAACAACATCACTACTAGTAATTATTTAGAGTCGACAGATGAGAGCAGCAAGGAGTCAACAGATGATCAAGATACTGATTCAGATTGTTCATCAGAGACTTCTGAATCGATCAGTGATGATAATGAGAATACAGCTTGCGAAGATAATTATACTCTGTGTGTTATTCCCGACATCCCTGACATGACAAAGGGTGACCACACGTCGTCAGTGGGTGTTGATGTACCAGATACAATCTCAGAAACACCTAATGAGGGGATACCATCCAACAAAAAGAAAAGTGGAGAAACAAGAAGCAGAAAGAAAAATACTAACTTCTGTCATTATTGCAAATCTTATGTCCTTAACTTCGCAAGACATCTGCAAAGGAAACATTCTGATGAAACCGATGTCCAAAAAATAATGAAGCTCCCCTCCAAGGCAAAAGAGAGACTTGAGTTAATTAAAAAAATACGGAATAAAGGAAATTTTTTAATGAATAGTACAGTAAGCAAACCGGTTCGAGCTACTAAATTAGGAGGAAAAATAATTCCATGTGATGGGTGTCTCGGATTTTTTTCAGAAAAGCTCCTTTGGAAGCATAGAAATAAATGCCTGAAGAATAAAGACAAATCACACAGATCCAACGCTCAAAGCTTATTAGTATCGACACATAATGTAGATCAGCAACTAAGAGACATAGTTTTCCCTAAAATGAGAGCGGACGACATATCAATGTGCGTGAAAAAAGATTTTTTAATATGCGCTTTCGGTGCTCACTATATGAAAATTCATAGAAAGAAACATTTCATTAATGTGACATCAAGAAAAATGAGGGAATTGGCGAGATTATTGTTACAAATTAGAGAAATAGTGCCAGAGATAACATCATTATTTGATGTTTTACGGCCTCTATATTTTGATACAATAGTGCAGGCAACAAAAATGGTTGGAAAATATGATGAAAAAACGGAAACATTTGAATCACCCACAATTGCTCTTAATATGGGCACTGCGCTCAAACAGTGCGCTGAATTGGCAATTACAATCTTATTAAAAAAAGAGCAAGACGCAAACACGATTGTAAGCGCAGAAACAGAGGGTGATTTAAAAACATTCATAAAAATGATCGAAAACCAATGGGAATTCAAGAGTCTAGAAAAAAATATTGAAAATGTAGGCACTTGTAATACAATTAAACAATCGGAAGAATCGGTTTCTAGAATTCAGAAAAGAAGAATTTTGATTCGGTGGACTGATGAACAAAAGAAAATTGTAAAGGATTTCTTTGATACCAATATAAGAAATAAAATACCTCCTAAAAAGATTGAATGTGAAGATTTAAAAAGGAAATTTCCTGTTATTCTTCAAAATAAGGACTGGCTAAAGATAAAAGTTTTTGTCCAAAATGAGTACAGTCAAAGCCCCATACTTGGGACAGTTAATAATAGTGAATCTATAAAGAAAATTAAAAAGATTGGCAAAGTTAAAAGAAATACAAACTACATCTGTGACATGTGCGGGAAGAGTTTCTGTAAAGAGGGACACCTGGCAAGGCACAAAGGAAAATGCCGCATGCAGAGTGGTAGAGAAGAGCAGAAGGGAGTTGAGAAAGTGAGGAAGGCTGATAAGAAGAAGGAGAAGACATTTCTATGCACCGCATGTAGTAAAGCATTTTATAGGGAAGAACAATTGACTAGACATCAGAGAACACATTTACCCAGGGAGAAAAAATATCACTGTCCCGAATGTCCCAAGAAATACGACCGTCCTGATAAACTCAAATTCCATTCGAGGGTGCATGTAGTTAATAAGTCGGAGCTGGAATCCAACTTCCTGTGTGTGTATTGTGGACACGGCTTCTCCAACTCCTCCAACCTGATAGTCCATCTACGCAGACATACTGGGGAGAAGCCGTACAAGTGTGATCTCTGTCAGAAGGGCTTCCCTCGTTCCACTGATTTGCAGAATCATAGAATTATTCACACGGGGGAAAGACCGTGTGTTTGCAAGATTTGTGGAAAAGCATTCTCCCACCAGCACAAGTTAGTGAGGCACGAGAGAATTCATACGGGACATAAACCTTTCAAATGCACCCTCTGCGAGAGAGCCTTCACACAGAGCAACGATCTGACACTTCACATCCGCAGACATACGGGAGATAGACCCTACGTGTGTACGGTGTGTGGGGATAGGTTCTATTTGAATACAGTACTGCAAGCTCACAAGAGGACCCACGGCCACTATGACGCTAAGGAACAAGAAGCCCAGGCTCGGCAGGATGGTCCTCTCACCTAG
Protein Sequence
MWEATGTVNPNLDLSKVCRTCMKESEHLMFMFDSYGKYDNRPLNEMFTTCTQLEIHKEDGLPVKMCPRCSECVEEAYCFRLQAERCNTLLKDIVTNRAFNKTVADIEIKEEVVKDEINDYDGGGIDTTYFSDDSDDAQPLSSIKKPGVVLYSCKFCELSSTVEDDILTHLVTSHREECGLMGSRGRGRPSQQELADRKMRIQRLLDNYVNRSDYESKVVLKLEMDSNRDTQDDSNNITTSNYLESTDESSKESTDDQDTDSDCSSETSESISDDNENTACEDNYTLCVIPDIPDMTKGDHTSSVGVDVPDTISETPNEGIPSNKKKSGETRSRKKNTNFCHYCKSYVLNFARHLQRKHSDETDVQKIMKLPSKAKERLELIKKIRNKGNFLMNSTVSKPVRATKLGGKIIPCDGCLGFFSEKLLWKHRNKCLKNKDKSHRSNAQSLLVSTHNVDQQLRDIVFPKMRADDISMCVKKDFLICAFGAHYMKIHRKKHFINVTSRKMRELARLLLQIREIVPEITSLFDVLRPLYFDTIVQATKMVGKYDEKTETFESPTIALNMGTALKQCAELAITILLKKEQDANTIVSAETEGDLKTFIKMIENQWEFKSLEKNIENVGTCNTIKQSEESVSRIQKRRILIRWTDEQKKIVKDFFDTNIRNKIPPKKIECEDLKRKFPVILQNKDWLKIKVFVQNEYSQSPILGTVNNSESIKKIKKIGKVKRNTNYICDMCGKSFCKEGHLARHKGKCRMQSGREEQKGVEKVRKADKKKEKTFLCTACSKAFYREEQLTRHQRTHLPREKKYHCPECPKKYDRPDKLKFHSRVHVVNKSELESNFLCVYCGHGFSNSSNLIVHLRRHTGEKPYKCDLCQKGFPRSTDLQNHRIIHTGERPCVCKICGKAFSHQHKLVRHERIHTGHKPFKCTLCERAFTQSNDLTLHIRRHTGDRPYVCTVCGDRFYLNTVLQAHKRTHGHYDAKEQEAQARQDGPLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-