Basic Information

Insect: Athripsodes cinereus
Gene Symbol: RREB1
Assembly: GCA_947579605.1
Location: OX388322.1:18040834-18053971[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00014 0.015 17.2 1.4 2 23 72 93 71 93 0.97

2 14 0.88 97 5.2 0.1 2 23 169 192 168 192 0.92

3 14 0.13 14 7.8 0.2 2 23 198 220 197 220 0.88

4 14 0.15 17 7.5 0.8 1 22 274 295 274 295 0.96

5 14 0.14 16 7.6 0.1 1 23 438 460 438 460 0.97

6 14 0.0016 0.18 13.8 0.9 1 23 469 491 469 491 0.99

7 14 0.00075 0.082 14.8 2.8 1 23 497 520 497 520 0.97

8 14 0.0013 0.14 14.1 2.8 1 23 943 966 943 966 0.96

9 14 0.00039 0.042 15.7 0.4 3 23 1270 1290 1269 1290 0.99

10 14 0.03 3.3 9.8 5.1 1 23 1296 1319 1296 1319 0.97

11 14 0.0039 0.43 12.5 1.8 1 23 1361 1385 1361 1385 0.95

12 14 0.79 87 5.3 1.7 1 23 1473 1496 1473 1496 0.91

13 14 0.022 2.4 10.2 0.4 2 23 1556 1577 1555 1577 0.94

14 14 0.024 2.7 10.1 5.9 1 23 1583 1605 1583 1605 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00014	0.015	17.2	1.4	2	23	72	93	71	93	0.97
2	14	0.88	97	5.2	0.1	2	23	169	192	168	192	0.92
3	14	0.13	14	7.8	0.2	2	23	198	220	197	220	0.88
4	14	0.15	17	7.5	0.8	1	22	274	295	274	295	0.96
5	14	0.14	16	7.6	0.1	1	23	438	460	438	460	0.97
6	14	0.0016	0.18	13.8	0.9	1	23	469	491	469	491	0.99
7	14	0.00075	0.082	14.8	2.8	1	23	497	520	497	520	0.97
8	14	0.0013	0.14	14.1	2.8	1	23	943	966	943	966	0.96
9	14	0.00039	0.042	15.7	0.4	3	23	1270	1290	1269	1290	0.99
10	14	0.03	3.3	9.8	5.1	1	23	1296	1319	1296	1319	0.97
11	14	0.0039	0.43	12.5	1.8	1	23	1361	1385	1361	1385	0.95
12	14	0.79	87	5.3	1.7	1	23	1473	1496	1473	1496	0.91
13	14	0.022	2.4	10.2	0.4	2	23	1556	1577	1555	1577	0.94
14	14	0.024	2.7	10.1	5.9	1	23	1583	1605	1583	1605	0.98

Sequence Information

Coding Sequence: ATGCAGGGCATGTCGGGTTTAATCACTGAACCAGCCAGCTCACCACCCAGGACATTAGTCACAGATGTAACAAAGGAGAAGTCAATAACGGAGCAAGCGATAGTACACAACCAAACCAAAGATTCACCAAAGAAACAAGATTGTGAAACAGCCCTGAAATCGCAGCCGGCATTGGAAAATAATAAATCAAAACAGATCGCAGACAAAACATTATCTTGCAAAATGTGTGACCTAAGTTTGAGTACTAATGCGGCATTACATAGACACATGAGATCGCATAAACAAAACCTCCAGCATGACACGGAGAGTGAAGACTCTGATACTTCCAACACTTCACCAAGAAGCCAGCCACGAAAGAGAAGATTAGAATATAACAACAACGAGAGAACCTCTAATGGATGTGAAGGGAGTAGTGCAGATGATGAACAAGGACCAGTTGCCAAAAGAAAACCAAAACCCATCAACAATAATGTGTTGAATGATGTTTCGACTTCACAAAGTTTATCGTGTCCAGTTTGCAGCAGAAAGAATTTTGATTCTCTACCTAGCTTAGAAACACACATAGAACAAACTCACCCTGATTACAGAGTGAAATGTTCTCTATGTCCGGAGAGTTTTAAGAACAGCCGTATTCTAAATCTTCATAACATCATGGTTCATCGCCCAGATCGTAAGAGCTTAACAAGTAGAAAGGTTTCGCCAAATTCAATACCCGGATTTAAGGATTGCACATTCATTGATTTCTCCAGTGAAAAATTTCCGCAAATCGCAAAAGAAATGTGTGAGAAAAACGTTCACAAATCTGTAACGGAACAAAAATTCAGATGTGAACATTGTGCCAGAGAGTTTCCGTGTGAAAGTGCTTTGAACATACATATTAAGACTTGCTTCCCATCGATTTCTGGTGAAAGAGACTATTTCTCTAAACGACGCGAATCGAGCAGTGCTGAAGAAGATGCTCGGCGCGATGACTTCTTTGCGAAATTAAACCTGCAAAATAAGTCACCTAATTATAACAATACGCCTAGTATTCGACCTATTGCCGAGGCAAAATTAAACATCTCAAACGAATACTTTCCTATCGCAAAAGATTCAGTCCGATCTCATGTCGATAACACAAAGGACCTCGCTGACATCCAATCAATACTCTCTGTTGCTTCAACGGGAGGTCTCTTTGAGCAATTGACTCATAAGAACCGTGATATTGTTGCACGTGCACAAGAAAATTCTATGCCTAAAAATGGTGAAGAAAATGAAGAAATGCAAGATGTGTTTGCCGCGGAATTCCGAAAAATGAAATTGAGAGGAGAATTCCCGTGCAGATTGTGCACAGCTATTTTTCCAAATCTGAGAGCTTTAAAGGGTCACAATAGAGTTCATTTAAGTGGTAATGGACCGGGTCCTTACAGATGCAACATGTGTCCGCATTCTTCTTTAGATAAAGCCGCTTTGGTTCGTCACATGAGAACCCATAATGGTGATCGTCCTTATGAATGTTCTGTGTGCAATTATGCATTCACTACTAAAGCCAACTGTGAAAGACATCTTAGAAATAGACATTCCAAAGTCACTCGAGAAGAAGTTAAACGTTCAATTATATATCATCCTTCAGAAGATCCTAATAATGATGAAGTCAATTCTAAATTGAACATTGCCCGAGACGATATGAAGAGATCTTCAATCATCTATACACCGCCAGACAACGATCGTCGTGAACAGCAAAGTGAACGCAGTACCCCTGTTTCACATTTTACAAGGGAACCGATAAACAAATTTAATGACCACAAGATCCCACTACCTTTACAGAGGGATTTACCTCTCGTTATCCCGCAACCAAGAATTATACATCCCCAGTTGGATAGTTTACGTCCAAATTTACCCATATCTCCTGAAGAGCTTCTTCAAGCTCATCTTCATCAGGGAAAGGCATTTGGGCAGTTAACTCAAATTCCAGAGTTTAATGGATCGGATGTTGAAAGAGAAAACGAAAGTGATGAGGATGACAATCCCGCAGATGAATCGTTTTCAGTGAAACCAAATTATTCTGAAACTCCAATGGATCTCAGCACTGGGGAAACTCAAGACGATGTACTGGATTTGAGCAAAAAGAAATCTGTTATTGATAACACACCTGAAACACCAAATTCAGATGCTGAAAATGAAAATTTCATAAAAACGGCAGAATTTAACAACAATCACGCTACAGTTTTCGAAAAAACTCAACAGCTTCTTCTTGCCCAACAACAGCTTTTGAAAGGAGTACAACTAGATCCAGCAACAACTTTCTATGCTAATCAACTGACAAATTTATATAGGGGCGCACCATTTCCAGGATTTGGAATCCCTCCAGGTTTCCCACTACATCCGTATCATGTTTTACCGCCAAATTTATTTCTCAATTCTCCAACAAACCCCAAAGATCTTGCCGAAATGAAAGAAAAAATTCACAAAGATATTATTATGGGTCTTCAACTTTCTGGTGGTGGCTTAGTCGGAATGGATCACAACAATATTGTGAACAAGGTTCTGGCCTCTGAAAGACTACAAGCTTTTCATCAACAAGCGATGAACAATGTTACAAATAATGAATCTAAGTGTTCTACCCCTGTTCCCATTATAAAAACAGAGGAAGACACAAAATCTGTATTACAAATCAATACTGATACTCCTACATCTACTTCATATCCCAACCCCATGTTGCCTTCTCCAAAGATTCAAAAAAAGGATCCCGCAAACAACACTAGTCCAAATTCTGTTAAAATGGTTATTAAGAACGGAGTTTTAATGCCAAAGCAAAAACAAAGGAGATATAGAACTGAAAGGCCATTTTCATGTGAGCATTGTTCAGCTCGATTTACTTTGAGATCCAATATGGAGAGACATATTAAACAACAGCATCCTTTGAACTGGTCACAACGTCAGAGGTCTAACATCGGGATACCTCGGAAAAGTCCTATTTCGATGGTGCCCCAAAACGTAACAGTGCCTCCTCTCAGCTACGAGAATCATTTAAATTTTATTAAAAACCTTAACGATGCCACCAGCGATGACGAAAAAGATTCTGAGTTACCAATTGATAAAGCCTGTAGTATGATTTTTGACCAAGTAAAATATGCTAATTTGACCCAACAGTTGAAATCTCAAAGTTCATTTGGGCAAGATAAAGTTGCGCCCAAAGCATGCACTTCTCAGCCTGCTGATAATGAAGAAGAAGACGAAGATGATGCCTTGATCATAGATGAAGAAGAGGACCAAGAAGATAATACAAAAACAAAAACCTCTAATGAAGAAGAGGAAAAGGATGACGGAAATTGGAAAGCTAAGAAAGTAGCACAAGAAATTTTAATCGGAGTGGCATCAAAGAATCAGAGTGATATTATGAAAGACTTTGATTGGAAAATTACTGGAAACCTGATTTCTAAAAATCCTTCAAACACCATGATACCTTCTTTCGTAAGTGAAATGAACCAAAAAGAAGGTGGATCTGTTGATAAAACAGAAAATGGAAAAGAAGAGGGTGATTTGGTGCCAGTGTCTCGTTTGTTAGATAATGCTGTGGCACAAATCCCTTTTGGAAAATATTTTAAGAATGATTTCTTACAAAATCAAGAGCAAGTACATGACATTGGAGTTGGTCAACAAGGAGAGGGATCTGAAGAAGATGAAGAAGGTCTAGTGGCTTCATCTGGTTCAACAAGTGAAGGGAACAATTCAGGAAGTGATGAAAATCGATCTGAATCAGAAAATACTACAACAGTGCCACAAAAAAAGAAGTCAGCCTACAGTTTGGCGCCTAATAGAGTTTTATGTCCATACTGTGACCGCAAGTTCCCTTGGTCGTCATCACTCAGAAGACACGTCCTCACACACACTGGACAAAAGCCTTACAAGTGCCCACACTGTCCTCTTCTGTTTACTACTAAATCAAATTGTGATAGACATCTACTTCGAAAGCATGGAAGCCACGCTTCACCTTCACAACAAAACATTAATCCCATTCCAGAGACATCTCCCTCTAATCTTCCTATTCCTGGATTGGGAAACCCAGGTCTTATGATGAGGAATGTGCCCGAGAGACCTTACAAATGCGACAGCTGCCCTAGCAGTACCTTCTCGACACTGAGCAATCTCAAAAAGCATATGTCCTCCAAACATGGCATCAACATACCAGACTCTAGCCCTAATGGTCCAAGAGCCGAAGACAGTCAGTCGAGACCAGAAAGTAGAGACCAAGATCTACAATTAAGTTCAGATGATGAAAAATCAGTAAAGAACGACTCTGACAATAAAGACAGTTCTAAAACTTCAACTGACTCTGGAGAACAAAGAAGTGAATGGGACAGTCAAATATCTTCCAAGTATAGTCCTTCTTACGTCCATGACACACCTTCCAACATTCAAAATACTGATTTACCTTTCAAATGTCACCTATGTGATCATTCATATGGCGAGAGGCAGGAGGCTTTAGATCACATTAAGGATCTCCATGCTTCTGAATTTGAACTGTTGATGTCCAAGGGAGCTTTGGAAACCAACATTAGCATTACTGAAGAAATGGGTTCCTCAACACCAGGCCACAGAAGTGAAGGGGGAGAGGACCAAGGGACAGAGGAGGGTGGAGAGCAACAGAGGGGGAAGTTCCCTGACTATACTAATAGGAAGGTGGTTTGTGCTTTTTGCATGAGAAGATTCTGGTCTGCAGAAGATTTGAGACgtcacatgcgcacccacagcggagagagaccattctcttgtgatgtttgcagaagacgattcacactgaagCACTCCATGCTGAGACATCGTAAGAAGCATGCACACGCTTCTGCTAGTGGAGAGGAAATGGATCTCTCAACAGCAAGTGGAGATGAAGAAATGAATTCCAGCGTTCCTCATAACCTCTCCACCTCATCGGGTTCAACAAGTTCACCAGGCAATTGTACGTACCAATCTCTCCCTAAGAGCTCTACACCGATATCTACTAAGAATCCACTCCTCACTCTCAGTGGATATCAAATGGCAGTGAATAAGAATTTATCTCCTGACATTCCCAACAATGTGAACAACAACAACTCTCCACCCGCACAGAATTATGAAGGAAAGATGAAACTAAAAAATGTGAACATTAAGGAATATAAGAGAAGCAGATATTCCTCCGATGACAACGAACCTCAAGATACCGAAATGGAGTCAGGTAATGATCTCATTTGTAACCTCTTGGAGATCAGCGATAGAGGAATGATAAATAAGTTGCTGTCATCTCCTGACGAGGCTGCCAAACTCCTCGGTGTAAACAAGTGA
Protein Sequence: MQGMSGLITEPASSPPRTLVTDVTKEKSITEQAIVHNQTKDSPKKQDCETALKSQPALENNKSKQIADKTLSCKMCDLSLSTNAALHRHMRSHKQNLQHDTESEDSDTSNTSPRSQPRKRRLEYNNNERTSNGCEGSSADDEQGPVAKRKPKPINNNVLNDVSTSQSLSCPVCSRKNFDSLPSLETHIEQTHPDYRVKCSLCPESFKNSRILNLHNIMVHRPDRKSLTSRKVSPNSIPGFKDCTFIDFSSEKFPQIAKEMCEKNVHKSVTEQKFRCEHCAREFPCESALNIHIKTCFPSISGERDYFSKRRESSSAEEDARRDDFFAKLNLQNKSPNYNNTPSIRPIAEAKLNISNEYFPIAKDSVRSHVDNTKDLADIQSILSVASTGGLFEQLTHKNRDIVARAQENSMPKNGEENEEMQDVFAAEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRVHLSGNGPGPYRCNMCPHSSLDKAALVRHMRTHNGDRPYECSVCNYAFTTKANCERHLRNRHSKVTREEVKRSIIYHPSEDPNNDEVNSKLNIARDDMKRSSIIYTPPDNDRREQQSERSTPVSHFTREPINKFNDHKIPLPLQRDLPLVIPQPRIIHPQLDSLRPNLPISPEELLQAHLHQGKAFGQLTQIPEFNGSDVERENESDEDDNPADESFSVKPNYSETPMDLSTGETQDDVLDLSKKKSVIDNTPETPNSDAENENFIKTAEFNNNHATVFEKTQQLLLAQQQLLKGVQLDPATTFYANQLTNLYRGAPFPGFGIPPGFPLHPYHVLPPNLFLNSPTNPKDLAEMKEKIHKDIIMGLQLSGGGLVGMDHNNIVNKVLASERLQAFHQQAMNNVTNNESKCSTPVPIIKTEEDTKSVLQINTDTPTSTSYPNPMLPSPKIQKKDPANNTSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPLNWSQRQRSNIGIPRKSPISMVPQNVTVPPLSYENHLNFIKNLNDATSDDEKDSELPIDKACSMIFDQVKYANLTQQLKSQSSFGQDKVAPKACTSQPADNEEEDEDDALIIDEEEDQEDNTKTKTSNEEEEKDDGNWKAKKVAQEILIGVASKNQSDIMKDFDWKITGNLISKNPSNTMIPSFVSEMNQKEGGSVDKTENGKEEGDLVPVSRLLDNAVAQIPFGKYFKNDFLQNQEQVHDIGVGQQGEGSEEDEEGLVASSGSTSEGNNSGSDENRSESENTTTVPQKKKSAYSLAPNRVLCPYCDRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGSHASPSQQNINPIPETSPSNLPIPGLGNPGLMMRNVPERPYKCDSCPSSTFSTLSNLKKHMSSKHGINIPDSSPNGPRAEDSQSRPESRDQDLQLSSDDEKSVKNDSDNKDSSKTSTDSGEQRSEWDSQISSKYSPSYVHDTPSNIQNTDLPFKCHLCDHSYGERQEALDHIKDLHASEFELLMSKGALETNISITEEMGSSTPGHRSEGGEDQGTEEGGEQQRGKFPDYTNRKVVCAFCMRRFWSAEDLRRHMRTHSGERPFSCDVCRRRFTLKHSMLRHRKKHAHASASGEEMDLSTASGDEEMNSSVPHNLSTSSGSTSSPGNCTYQSLPKSSTPISTKNPLLTLSGYQMAVNKNLSPDIPNNVNNNNSPPAQNYEGKMKLKNVNIKEYKRSRYSSDDNEPQDTEMESGNDLICNLLEISDRGMINKLLSSPDEAAKLLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00299519;
90% Identity: -
80% Identity: -