Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388323.1:7100196-7103835[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00042 0.046 15.6 0.5 1 23 78 100 78 100 0.96

2 9 0.00028 0.031 16.1 1.2 1 23 107 129 107 129 0.98

3 9 7.5e-05 0.0083 18.0 3.2 2 23 136 157 136 157 0.96

4 9 0.0015 0.16 13.9 1.0 1 23 163 186 163 186 0.91

5 9 0.11 13 7.9 1.8 2 21 289 308 289 310 0.93

6 9 0.017 1.8 10.6 3.4 1 23 316 338 316 338 0.94

7 9 4e-05 0.0044 18.8 0.4 2 23 345 366 344 366 0.96

8 9 1.3e-05 0.0014 20.4 6.5 1 23 372 394 372 394 0.97

9 9 1.5e-06 0.00016 23.3 1.8 2 23 465 486 464 486 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00042	0.046	15.6	0.5	1	23	78	100	78	100	0.96
2	9	0.00028	0.031	16.1	1.2	1	23	107	129	107	129	0.98
3	9	7.5e-05	0.0083	18.0	3.2	2	23	136	157	136	157	0.96
4	9	0.0015	0.16	13.9	1.0	1	23	163	186	163	186	0.91
5	9	0.11	13	7.9	1.8	2	21	289	308	289	310	0.93
6	9	0.017	1.8	10.6	3.4	1	23	316	338	316	338	0.94
7	9	4e-05	0.0044	18.8	0.4	2	23	345	366	344	366	0.96
8	9	1.3e-05	0.0014	20.4	6.5	1	23	372	394	372	394	0.97
9	9	1.5e-06	0.00016	23.3	1.8	2	23	465	486	464	486	0.96

Sequence Information

Coding Sequence: ATGGAAGAGATAATTATTAAGAAGGAAGTGGAAACTCACCATGAAAGAGAGATTACTGAATATGCGCTTCAAAGTGATGAATCATTACACAATCCTTCCACATCTAAAGAAGATGATGTGGTGTATGAAACATCCCAACAAAATACAGACATACACAGCGAGTTGTCACTGCCTAACTTTTCACTGAGCGAATTTGATTTATCGCGATTAAAGGTTCCACAGTATTCCTTACACATTTGTAACATTTGTGGAGAGGCTTGTGGCAGTTTGAGTATGCTGGAGACACATATTCTCAGTCACAATGGAGAGAAGCCAGTATTTAAATGTGACCAATGTGATAAAGTGTATCCCGATGTATTGAAGCTGAAGAGGCACAGATACACACACAGGTATGAGATATCAGAGACGTGTGATATATGTAACAAACATTTTACTTCCTTGCCTAACCTCAAGAGACATAAGCAATTGCATTCAGGGGATCGCCCTTTCTCCTGCATCCTCTGTAAAGAGACCTTCACGCGGAGAGATAAACTTAACATGCATATGTTAAATATACATGGTTTACAATTGGCTGACTGTGTCAGATATCTCACTGTTAATAATATCAACCCAAGTGTTCCACAGGATCAATCTGATAATATGTTATCTTCCGAGAATGAGATGCAAACAAGCGATAAAAATTTAGGAGAAGTAGATGGAGAAAATAATGACACACAAAATTTTATTAAGTCAGAAATGATAGAAAGAATGGCTAATTACTTAAACAGTAGCATGATGTGTGAGCCAGGTACTTCTAAAGAAGGTGATTCTTTCCTCTTTGATGAGGGTCAACTCGATGTAAGCACCAAATCTTTTGGATTGAATTATTGTGATATTTGTGAAAAGGGCTTTACAAATGTTTATATTTTTAAACGTCATATGTTATGTCACAGTAGTGACAGGCCTCATGTGTGCATTCACTGTAGCAAGAGATACCCAGACACCAACAAACTCCGAGAGCATATGAGAGTCCACAATCCAAATATATCCTTGACTtgtgatgtgtgctccaaacaatttggggacagggcaaatttgagacgtcacaggcttatacacaatggagatagacctcatcagtgtgacttttgtggaaagagattcactcgtaaagatcacctcaagtcacatAGATTACTACATGTGTGGAACGGAGACATAGGAAATGGAAATAGTAATATTTCAAATCAGTCCATTGGCGTGGAAGGCCCTCTCAATATTTCTGTGTCAAATAATGTGATTGTACCTCAAAGTATGGCAGAAATTCAAGCTAAAGCAATAGAGTTAGGTATTTTCAGAGCAAAACGTAAAAAATATAATGTCAAACCGAAACCAGATAGAAGAAAATCTTTAGAATGTGTCCAGTGCCATAGAGTGTTCACCAAAAGCTCTAACTTAAAAAGACATATGATAGTGCACAACAACAACAGAATATTTAAAAAGAAAGGGAGACGAGCAACAATGAAAGGAAACTTCACTGGAAGAAAAGAATCTAAGGCACGTGATTGTGAATCTAGTGGATATAAAGAAAAATCCAATTCTAATGAAATGCAGGCGGCAGATGTAGAACAAAGCGAAGGTGATGAAGAACATAATAATGCTAATGCATCTAACATTTGGAATCCCTTTGTGGATTCGGAAAGTACTTTAAACAAAGATGATTTGAAAACTGAATCTCCAGAGTTTAATGAAAATGATGGTTATGATGAAGAAGATATAGATCAACAGGAAGATGAAGAAAGTGACGTAGAAGAAAATGATGAAGAAGGGGAATACCATAATGACAGTTGTGACGATGAGAACACGTCCGCACCAGAAGATAATGATAGCGCAGAGGAAAGCAAACCAAATCCACATGATATTCTTAGTCTCAGCTACAACAAGACTGATAAATCAACAGAAGCAGCTATATCTGACCATGATCAAACACTTGGCGATAATAAAGAAGAAGGGAATAACTATATAGAAATAAGTGTACCAGGCATTAGCGATGAAGCCAGTGATTCACATGCCAATAGAGACAACATAACACTAATATTTAAGAAAAGAAAACGTAATAAAAATAAAGGTGATGAAGATGAAGAGTACTTAGTATCTCGGAAAAAATCCAAACGCAAGAAAGGAAGTTTTCCATGTGAACGTTGTGGAGGAAATGGTAAATGTTTTCTAAAGATGCAGAAAGTGGTCGCTTTAGCCAGTCTAGAGCCAATTTGTAAGAGTCTGAACACCTTTCTCATTTCCTCCAATTAG
Protein Sequence: MEEIIIKKEVETHHEREITEYALQSDESLHNPSTSKEDDVVYETSQQNTDIHSELSLPNFSLSEFDLSRLKVPQYSLHICNICGEACGSLSMLETHILSHNGEKPVFKCDQCDKVYPDVLKLKRHRYTHRYEISETCDICNKHFTSLPNLKRHKQLHSGDRPFSCILCKETFTRRDKLNMHMLNIHGLQLADCVRYLTVNNINPSVPQDQSDNMLSSENEMQTSDKNLGEVDGENNDTQNFIKSEMIERMANYLNSSMMCEPGTSKEGDSFLFDEGQLDVSTKSFGLNYCDICEKGFTNVYIFKRHMLCHSSDRPHVCIHCSKRYPDTNKLREHMRVHNPNISLTCDVCSKQFGDRANLRRHRLIHNGDRPHQCDFCGKRFTRKDHLKSHRLLHVWNGDIGNGNSNISNQSIGVEGPLNISVSNNVIVPQSMAEIQAKAIELGIFRAKRKKYNVKPKPDRRKSLECVQCHRVFTKSSNLKRHMIVHNNNRIFKKKGRRATMKGNFTGRKESKARDCESSGYKEKSNSNEMQAADVEQSEGDEEHNNANASNIWNPFVDSESTLNKDDLKTESPEFNENDGYDEEDIDQQEDEESDVEENDEEGEYHNDSCDDENTSAPEDNDSAEESKPNPHDILSLSYNKTDKSTEAAISDHDQTLGDNKEEGNNYIEISVPGISDEASDSHANRDNITLIFKKRKRNKNKGDEDEEYLVSRKKSKRKKGSFPCERCGGNGKCFLKMQKVVALASLEPICKSLNTFLISSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -