Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388319.1:7848884-7859893[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.64 70 5.6 0.5 3 23 174 194 173 194 0.95

2 17 0.013 1.4 10.9 1.0 2 23 198 220 197 220 0.92

3 17 4.3 4.8e+02 3.0 0.0 9 23 467 482 459 482 0.91

4 17 5 5.5e+02 2.8 1.5 1 20 490 509 490 511 0.94

5 17 0.00025 0.027 16.3 1.6 1 23 520 542 520 542 0.96

6 17 0.16 17 7.5 1.7 1 19 590 608 590 613 0.93

7 17 1.1 1.2e+02 4.9 0.2 2 23 698 720 697 720 0.86

8 17 2 2.2e+02 4.0 0.1 1 23 728 751 728 751 0.89

9 17 0.00015 0.017 17.0 1.0 1 23 757 780 757 780 0.94

10 17 3e-05 0.0033 19.2 2.0 1 23 787 809 787 809 0.98

11 17 1.9e-05 0.002 19.9 2.8 1 23 814 836 814 836 0.97

12 17 9.5e-05 0.01 17.6 4.0 1 23 842 864 842 864 0.98

13 17 0.0016 0.18 13.8 3.4 1 23 870 892 870 892 0.98

14 17 1e-06 0.00011 23.8 1.9 2 23 899 920 899 920 0.98

15 17 2.5e-05 0.0027 19.5 1.5 3 23 928 949 926 949 0.94

16 17 0.0037 0.41 12.6 0.3 1 23 956 978 956 978 0.97

17 17 0.0042 0.46 12.4 1.0 2 23 985 1007 984 1007 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.64	70	5.6	0.5	3	23	174	194	173	194	0.95
2	17	0.013	1.4	10.9	1.0	2	23	198	220	197	220	0.92
3	17	4.3	4.8e+02	3.0	0.0	9	23	467	482	459	482	0.91
4	17	5	5.5e+02	2.8	1.5	1	20	490	509	490	511	0.94
5	17	0.00025	0.027	16.3	1.6	1	23	520	542	520	542	0.96
6	17	0.16	17	7.5	1.7	1	19	590	608	590	613	0.93
7	17	1.1	1.2e+02	4.9	0.2	2	23	698	720	697	720	0.86
8	17	2	2.2e+02	4.0	0.1	1	23	728	751	728	751	0.89
9	17	0.00015	0.017	17.0	1.0	1	23	757	780	757	780	0.94
10	17	3e-05	0.0033	19.2	2.0	1	23	787	809	787	809	0.98
11	17	1.9e-05	0.002	19.9	2.8	1	23	814	836	814	836	0.97
12	17	9.5e-05	0.01	17.6	4.0	1	23	842	864	842	864	0.98
13	17	0.0016	0.18	13.8	3.4	1	23	870	892	870	892	0.98
14	17	1e-06	0.00011	23.8	1.9	2	23	899	920	899	920	0.98
15	17	2.5e-05	0.0027	19.5	1.5	3	23	928	949	926	949	0.94
16	17	0.0037	0.41	12.6	0.3	1	23	956	978	956	978	0.97
17	17	0.0042	0.46	12.4	1.0	2	23	985	1007	984	1007	0.95

Sequence Information

Coding Sequence: ATGTCAGCTGGAGTTCGACCACTACAAGAAGAGGATTCAGATAATGAACCTCTGTCTACTCTTACAGAAGAGAAAAACAGTCCTATTGAAAAAGATAAATGCGCAGAGTTTGTCCTAACGTCTCGACCACTTTTCAGTAAAATATACGAAAAGAAAAAGTTATGGAGGAAGACAGATATTATACATGAGAAGATTGAAACAGAACAGATAAAATCTGTGTCTAATGATATTAATTATACAGATAATGGAATTCAAGGAGAACACAGAGAAAGTGAAGTTGATCAGGCTCCAGCCGCCACTGAGATTGAAGGAAGCTTTGAGAATAATGGAGGTTTTACAAATATGTTTATTTCATACATCCTTCCACCTTTAAAATATGAAACACCTCTGACGGATGTATGGCTGGATGCCAAATCCATAAATCAGACTGGTCCCATCTCCTGTGTCCTCTGTTATGAATGCTTCCTCAACAAAAACAAGTTACTTCTGCACTACGTACTTAATCATAACAAACCTTTTTGTGGAACATGCAGGTATTTTGTGTCAGACAAGGAGTCCTGGCAGAAGCATTGGGAGTATCATCTTCCACTGAGATGCTCTCATTGTCCCATTAAGTTCATGGACGAGGCATCTCTTAGAGCTCACTTCACATCTTACCATCAGCTTGCCCACTGTCGTATGTGCAACCTGATGCTTCCGATCGGAGAGCCATACACCAAACACCTCTATACAAAGCACTGTGTTATCGTTGACCAAAACCGTGAAGCTGAAGAAGTTTGGGTTGTCAAAAATCACAAAACATGGACTTTCTCATGTTTACTTTGTGGAAAAGACAATTTACCCAGTATAGATTTTCTCAAACACTTTTTATACCATCACAAATTTTCATTAAAGAGTCTGACAAATCTTATCAATGGGAAAGATTTGAAATTCTCTGTATTAGGTGCTAACATAAGTACTTTTACCCAGATGGCTGAACCTGATTCTACAGAATCTGTTGCTGATAATACACAGGGAAACAATAATTCTGAAGAAGTTAACGATGAGCCTATATGTTCTATTAAAAAGGAAGTGGTTAGTGATGAAGAGTCTATGGAAGTTAATGAGAACGGAGATGATCATCATAATGACGGGAAAACAGATCCAGAACCAGTTGACGCTAATGCAGAAATGTCTGATGTTGTCTCTGAAAGTTTCCTTGTGAAATGTTCAGGAAGAGAGGATTTCGACGCCACTTTGGTAGAGTTTGTAAATGTTACTAAGAATGAATTAGATTATGTTAATACAAATTTATCAGATGGACCGTTAGCGACAGTCGGCAGTGATTGTTGGATTCAATATGATGCTGAGAGTTCTGATCCTATAAGCATTGCATGTCCACTCTGCATTGCTGTTATCACATTTACATCCCCGATAAGTTTGTCAAATCATATTACAAAGCAGCACTCTTTAAAATGTAATCACAGTTATGTGTGCCGCTTTTGTTTGACGACTTGTGTCTCCTATCAAGAATTCATGAAGCATGTGGAGTCAGAAAAAGAGTGCTTTCAAAGTCTTTACGTTTGTCAGTTTTGTAATAAAGAATTTAGTACAAGGGAGTCAGTGCGTAAGCATCTTACAGAACACGAAGATGATGTGAAAAGTAAAGAATGTACAAGCCCTCAGTTGGGCTTGAAGTGTAGATTCTGTCCTCAATTATTTTGGGAAGAATGGAGCAGAGAGAAACATCATTGTGAAGATCATTATAAGATGAATAATGAATATTTCTACAGGTGCTGTTTGTGCGATAGGATATTTAGCGATAAGATTTGGTGGGCTCATCATGATTTATATGAGCATAGTAATCTCTCAGACAAGAAATCAGCACTGACATGGATTGCGTTTCGTTGTCTTATATGTTACGACGTCCATCCACAAATAGATGATCTGAGGGTACATTTTAAAGAGAAGCATCCAGATTGTAAGAGGTTCTACTGCAATGTCCCTGGTTGTATATCACATCCGTTCAGAATACCCAGATACTTAAAAAGGCATTACGAGGTCAACCACAAACCAGGAGTTGCATCTCATACAAACAATCCATCAAACTTACGTTGCAACGAGTGTGGCAAGCAGATGAGTACGGTTAGAGCTGCTAACACACACAGAACTGTGGCGCACGGTGACAAGTCCACTTCAAGGTTCAAGTGTAGGATCTGTGGACTTGGATTGCCTTCTATGCAAGACAGGAAGCTTCATTATCTAGTGGTACATCCCGACATTCCGGCCTTCACATGTTCCGTATGTGGCAAGGGATATAATAACAAATCAGCTCTGTATTCTCACCGGACACAGAGTCACTCTGTCAGCCTCATAACATTCACATGCTCTTATTGTAATAAAGTTTTCAATAAACGTGATTCATACAAGGAACATCTGTTGATCCACATTGGACCCAGACACGTGTGTCCACACTGCTCTAGAGTATTTGTACAGCGCTCTAACATGCTGAGGCATGTGCGCCTTCACACAGGGGAAAAGCCTTATCCGTGTCTGCACTGCGACAAGACTTTCTCAGACAAGGGTGCATGCAATTCTCATATGAGGACTCATTCCCGTCAGGATGCATATCCATGCACTTTTTGTGGACAGAAGTTCTTACAGAAACAGAAACTCAAATACCACATGAGAAAGCACACAGGAGAAGATCTCGAGACATGTCCTGTTTGCAACAAGAAGTTCACAAATAATACAAACCTTCGGGAGCATCTCAAAACACACGATGATTCTTGTCCAGTCAACTGTCCTCATTGCGGCAAAATATTTACATCTAAGCGCTATATGGAGCGTCATGTTAGAGATACCCACAGCCATACTGCTGAAGTCCATCCATGTCCAATCTGTGCTAGACCTTGTCCTAGACTAATAGCATTGAGGAATCATTTACTGACTCATGCAACCATCAAGCATATCTCTTGTTTACTCTGCGGAAAAAGTTATAATGGAAAAAAGAGCATCAACAGACACTTAAACAAACGTCATAGCATACAACCAAGTGACAACAATTACCGAGCCAGCTATTATCAACTAGATCCTAGGCACTGCGGATTGGGACTGGACGAAGAAACTATTGAAAGAGTTTTTGGACCTGAAAAAGACATCAAACCCATGATACCAATTCCTGTTCCAATTGAAGAGCATAAACCAAATAATAATAAAAAAGGGGCACCAAAAACACCAAATAATGATTCTTCTGATTCTTCAGATGGAGACTACAAACCTACATCAACATTGAATAAAAATGTTATGAAAAAGAGAAATAAAATGGAAGATAAAAATAACAGTGATACTGATGTACCAGTATCTGGCTTAGAACTGGCTTCAATGAAATCAAGAGCGCGAAGGGAGACATCAAAATCGGTTAATTATGTCCTTGATTCTGACGACGATACGCCCAAACCTAAAACTGCAAAGAAAAAAGGTAAAGTGAAATATAAGAAAAAAAATAAATCTAAAGAAGTTGTTCTTCCCATTGAATATGCAGGTGAGAATGAAAAAGATGAATTTCCATATGTGGAAATCAAACAGGAACCAATAGATTATGATTAA
Protein Sequence: MSAGVRPLQEEDSDNEPLSTLTEEKNSPIEKDKCAEFVLTSRPLFSKIYEKKKLWRKTDIIHEKIETEQIKSVSNDINYTDNGIQGEHRESEVDQAPAATEIEGSFENNGGFTNMFISYILPPLKYETPLTDVWLDAKSINQTGPISCVLCYECFLNKNKLLLHYVLNHNKPFCGTCRYFVSDKESWQKHWEYHLPLRCSHCPIKFMDEASLRAHFTSYHQLAHCRMCNLMLPIGEPYTKHLYTKHCVIVDQNREAEEVWVVKNHKTWTFSCLLCGKDNLPSIDFLKHFLYHHKFSLKSLTNLINGKDLKFSVLGANISTFTQMAEPDSTESVADNTQGNNNSEEVNDEPICSIKKEVVSDEESMEVNENGDDHHNDGKTDPEPVDANAEMSDVVSESFLVKCSGREDFDATLVEFVNVTKNELDYVNTNLSDGPLATVGSDCWIQYDAESSDPISIACPLCIAVITFTSPISLSNHITKQHSLKCNHSYVCRFCLTTCVSYQEFMKHVESEKECFQSLYVCQFCNKEFSTRESVRKHLTEHEDDVKSKECTSPQLGLKCRFCPQLFWEEWSREKHHCEDHYKMNNEYFYRCCLCDRIFSDKIWWAHHDLYEHSNLSDKKSALTWIAFRCLICYDVHPQIDDLRVHFKEKHPDCKRFYCNVPGCISHPFRIPRYLKRHYEVNHKPGVASHTNNPSNLRCNECGKQMSTVRAANTHRTVAHGDKSTSRFKCRICGLGLPSMQDRKLHYLVVHPDIPAFTCSVCGKGYNNKSALYSHRTQSHSVSLITFTCSYCNKVFNKRDSYKEHLLIHIGPRHVCPHCSRVFVQRSNMLRHVRLHTGEKPYPCLHCDKTFSDKGACNSHMRTHSRQDAYPCTFCGQKFLQKQKLKYHMRKHTGEDLETCPVCNKKFTNNTNLREHLKTHDDSCPVNCPHCGKIFTSKRYMERHVRDTHSHTAEVHPCPICARPCPRLIALRNHLLTHATIKHISCLLCGKSYNGKKSINRHLNKRHSIQPSDNNYRASYYQLDPRHCGLGLDEETIERVFGPEKDIKPMIPIPVPIEEHKPNNNKKGAPKTPNNDSSDSSDGDYKPTSTLNKNVMKKRNKMEDKNNSDTDVPVSGLELASMKSRARRETSKSVNYVLDSDDDTPKPKTAKKKGKVKYKKKNKSKEVVLPIEYAGENEKDEFPYVEIKQEPIDYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -