Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388306.1:26101512-26124609[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0019 0.21 13.5 2.2 2 23 212 233 211 233 0.96

2 11 0.00029 0.031 16.1 0.2 3 23 241 261 240 261 0.98

3 11 0.0005 0.055 15.4 1.5 1 23 266 288 266 288 0.93

4 11 0.00028 0.031 16.2 1.5 1 23 294 316 294 316 0.98

5 11 5.4e-05 0.006 18.4 0.5 1 23 322 345 322 345 0.97

6 11 3.9 4.3e+02 3.1 0.1 1 20 632 652 632 654 0.77

7 11 2.3e-05 0.0025 19.6 1.8 1 23 657 679 657 679 0.99

8 11 0.0096 1.1 11.3 0.8 3 23 687 707 685 707 0.96

9 11 0.0011 0.12 14.3 5.4 1 23 713 735 713 735 0.98

10 11 0.0001 0.011 17.5 1.3 1 23 741 763 741 763 0.99

11 11 2.5e-05 0.0027 19.5 1.0 1 23 769 792 769 792 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0019	0.21	13.5	2.2	2	23	212	233	211	233	0.96
2	11	0.00029	0.031	16.1	0.2	3	23	241	261	240	261	0.98
3	11	0.0005	0.055	15.4	1.5	1	23	266	288	266	288	0.93
4	11	0.00028	0.031	16.2	1.5	1	23	294	316	294	316	0.98
5	11	5.4e-05	0.006	18.4	0.5	1	23	322	345	322	345	0.97
6	11	3.9	4.3e+02	3.1	0.1	1	20	632	652	632	654	0.77
7	11	2.3e-05	0.0025	19.6	1.8	1	23	657	679	657	679	0.99
8	11	0.0096	1.1	11.3	0.8	3	23	687	707	685	707	0.96
9	11	0.0011	0.12	14.3	5.4	1	23	713	735	713	735	0.98
10	11	0.0001	0.011	17.5	1.3	1	23	741	763	741	763	0.99
11	11	2.5e-05	0.0027	19.5	1.0	1	23	769	792	769	792	0.95

Sequence Information

Coding Sequence: ATGGAGGCTCAAGTAGATGATGAATTACCTGCACACATATGCAAAGTATGCAAGGATAAGTTAATAACATCATACCTTTTGAAACAACAGGCAGAGAAGTCTGATAGTATTTTCAGAAATACCAACGGCATGACGAAATCAAAAATTATGTTTAAAAATGTAATTGAGTTGAAGTCAGAATTAAAAAATATGGATTTGAAGACTGAGTATCCACCATTTGAACCCTCAGTAGATATAAGTGATATTGTAGAACGAGGTGGAGAAATTGGTAATGTCACTATCAACAAAATACAAAATTACAATGATGACTGGGATAATGATATTGACTATGATGATGAATATTTCCCACCAGGTGAAGAAAAGAAACACAGTAAAAGTATACACTCCTCTAAAAAGCATCATGCAAAAAGAAAAACCTTTAGTAATGATAGCTTCAATTCTAAAACTATCAATGTTCAAGGACTTGGCCAACTGGTTGAGAAGAAATTCAGAAAAAGTTTAGAATACTTCACTGTAAAGATTCCTATTGCTGCAAAGCCTGCAGAGCCAATAAAAGAACTCTGTCCCATATGTGGATTGCTTTGTCTTAAACTTAAGGCTCATATAGCAAAACATGAAGGTAAAGCAACTCTGGAATGTGATCAGTGTTCAAAGAAATTCACATCTAAATGTGCTATACAGGACCACATGGCCAAACATACAGGAATTAAAAACAAAATTTGTAAAATATGTGGTGCCTCATATTATAACATAAAAGGCCTTGCTAGGCATCAGAAAACGCATGAAGAGAAGAAATATAAATGTACACATTGTCCAAAGGCATTCATTGAGAGGTCCATATTGAAACGGCACATGTGGACCCATACTGGATATAAGCCATTTGAGTGTGACCATTGTGCCAGACCATTTAGCTCCAGGGAGATTCTTCGCACTCACATGAGATCACACACTGGAGAGAAGCCATACACCTGCGAGTTATGTAATGTTGCATTTTCATACAAAGTGAATTTGAATAATCACACGCTGAAAGTACATGGAGTGAACATCAGATATAAACAAATCCACACAGTGACAGCACAAATAGTAAATGGAGAATATGATATGAGTGATGTCCCACAATACCAATTTCTGAAAGTATGTTTAGAAGGAGAAAACGCTACGATACCATTATTTGACGCATCTGCGACAGAGAAAAGTTTTGTATCATTCGCTGATATGTTAAACCAATGCTCCAATGTCCAGGCTATAGATGGTGACGAGTTACCCGCCTTTATATGTTTACCATGCAAAGAATCTTTAACTAATGCATATAAATTCAAGAGTCTGGCTGAAGAATCTGACAATATTTTACGTCAAAAGAAAGAAGTCAAGCCCAAAATAACTTTCCAAAATTTGAATGAATTGAAGCTGAAGATAGAAGAAAAAAGTCTTATAGAGCATATTCCTGCAGTGGAGTGCAATAAAAATATATATAACATTGTGGAGAAGGGGGGAGCTATTGGAAATACTCTCATACAGAAAGTAAAGAAAGAAGAACATTCAGATAATGATATGGAAGTGGAATATTTGGATGAGGATTTTGTTGTGGATTCACCTCCGAAAAAGAAACGCCCAGTACGTGTGAGGCAATCAACGAAAGCTTATACTGTGATAGCAACCATTAAGGGACTAGACAATGTTGTAGACTTGACTGATGATGATGCTAAATACTGCACATTAAAAGAACCCATTCCTATTGTATCCAGTAACATGACAAAAGAAAAATTGCAAAAAGCTCGGAAACTTCCAAAGAGGTCTGGATTTATTGCTCCACTTGGAAAAAAAATCAAAATCAAATCTAATAAGTCTGGTACTAAACGAGAAAAAAAAGTAGTTCCAAAAGAAAAAGTAAAACATGTTTGTTCAATATGTGGCCTCCAAACAGTTGGAATAAAGTCACACTTACTCACTCATCTTGAATCTAAACCTTTTAAATGTGAACAGTGCTCTAAATCTTTTGCACAACGAGGGAATTATGTTATGCATCTCAAGAAGCACAACGGTGTCAAAGATCAAATCTGTGAAATATGTGGAGCAGCTTTTTACTTTCATAAATCAGTTAAGCGACACAAAATGATTCACACCAAAGACAGAAAATTTAATTGCCATTTATGTCCTAAAAAGTTTTATGCGAAATGTGATTTGAACCGCCATTTAAAAGTTCACTCCGGTTACAAACCATTCAAGTGTGAGACGTGTTCTGTAATGTTTAATGCTAAACACCAATTGGAAGCACACATACGAATGCATACGGGGGAAAAGCCTTATACTTGCGAGATCTGTAATGTATCATTTACTTACAAAGTAAACCTCAACAACCATGTGTATAAGAATCATGGAGTAAACTTGAAATATAAATCTATTTACAAAATTACACCAGATGTATTGAGTGAACTATATCAACAAGAATCTGAAAATGCGCACAAAGAAAAATCTTTACCAGCTGCTGAGTAG
Protein Sequence: MEAQVDDELPAHICKVCKDKLITSYLLKQQAEKSDSIFRNTNGMTKSKIMFKNVIELKSELKNMDLKTEYPPFEPSVDISDIVERGGEIGNVTINKIQNYNDDWDNDIDYDDEYFPPGEEKKHSKSIHSSKKHHAKRKTFSNDSFNSKTINVQGLGQLVEKKFRKSLEYFTVKIPIAAKPAEPIKELCPICGLLCLKLKAHIAKHEGKATLECDQCSKKFTSKCAIQDHMAKHTGIKNKICKICGASYYNIKGLARHQKTHEEKKYKCTHCPKAFIERSILKRHMWTHTGYKPFECDHCARPFSSREILRTHMRSHTGEKPYTCELCNVAFSYKVNLNNHTLKVHGVNIRYKQIHTVTAQIVNGEYDMSDVPQYQFLKVCLEGENATIPLFDASATEKSFVSFADMLNQCSNVQAIDGDELPAFICLPCKESLTNAYKFKSLAEESDNILRQKKEVKPKITFQNLNELKLKIEEKSLIEHIPAVECNKNIYNIVEKGGAIGNTLIQKVKKEEHSDNDMEVEYLDEDFVVDSPPKKKRPVRVRQSTKAYTVIATIKGLDNVVDLTDDDAKYCTLKEPIPIVSSNMTKEKLQKARKLPKRSGFIAPLGKKIKIKSNKSGTKREKKVVPKEKVKHVCSICGLQTVGIKSHLLTHLESKPFKCEQCSKSFAQRGNYVMHLKKHNGVKDQICEICGAAFYFHKSVKRHKMIHTKDRKFNCHLCPKKFYAKCDLNRHLKVHSGYKPFKCETCSVMFNAKHQLEAHIRMHTGEKPYTCEICNVSFTYKVNLNNHVYKNHGVNLKYKSIYKITPDVLSELYQQESENAHKEKSLPAAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -