Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388311.1:28732243-28745808[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.036 3.9 9.5 0.8 3 23 197 217 195 217 0.94

2 18 1.7 1.8e+02 4.3 3.3 1 21 231 251 231 253 0.90

3 18 0.0021 0.23 13.4 6.1 2 23 267 288 266 288 0.96

4 18 0.0099 1.1 11.3 0.3 3 23 301 321 299 321 0.95

5 18 1.8e-05 0.002 19.9 3.7 1 23 340 362 340 362 0.98

6 18 2.5 2.8e+02 3.7 0.1 1 23 369 393 369 393 0.87

7 18 0.00016 0.018 16.9 1.5 2 23 399 420 398 420 0.96

8 18 0.0066 0.72 11.8 0.9 1 23 426 448 426 448 0.98

9 18 9.1e-07 0.0001 24.0 1.0 1 23 454 476 454 476 0.96

10 18 0.032 3.5 9.7 2.1 1 23 718 740 718 740 0.97

11 18 1.8 1.9e+02 4.2 3.6 1 21 754 774 754 776 0.91

12 18 0.00011 0.012 17.4 5.0 2 23 790 811 789 811 0.96

13 18 8.8 9.7e+02 2.0 0.2 2 9 822 829 821 833 0.85

14 18 5.1e-05 0.0056 18.5 1.6 1 23 849 871 849 871 0.98

15 18 0.057 6.3 8.9 0.2 1 23 878 903 878 903 0.93

16 18 0.0016 0.17 13.8 1.5 2 23 909 930 908 930 0.96

17 18 0.0059 0.65 12.0 2.5 1 23 936 958 936 958 0.97

18 18 1.8e-06 0.0002 23.1 1.2 1 23 964 986 964 986 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.036	3.9	9.5	0.8	3	23	197	217	195	217	0.94
2	18	1.7	1.8e+02	4.3	3.3	1	21	231	251	231	253	0.90
3	18	0.0021	0.23	13.4	6.1	2	23	267	288	266	288	0.96
4	18	0.0099	1.1	11.3	0.3	3	23	301	321	299	321	0.95
5	18	1.8e-05	0.002	19.9	3.7	1	23	340	362	340	362	0.98
6	18	2.5	2.8e+02	3.7	0.1	1	23	369	393	369	393	0.87
7	18	0.00016	0.018	16.9	1.5	2	23	399	420	398	420	0.96
8	18	0.0066	0.72	11.8	0.9	1	23	426	448	426	448	0.98
9	18	9.1e-07	0.0001	24.0	1.0	1	23	454	476	454	476	0.96
10	18	0.032	3.5	9.7	2.1	1	23	718	740	718	740	0.97
11	18	1.8	1.9e+02	4.2	3.6	1	21	754	774	754	776	0.91
12	18	0.00011	0.012	17.4	5.0	2	23	790	811	789	811	0.96
13	18	8.8	9.7e+02	2.0	0.2	2	9	822	829	821	833	0.85
14	18	5.1e-05	0.0056	18.5	1.6	1	23	849	871	849	871	0.98
15	18	0.057	6.3	8.9	0.2	1	23	878	903	878	903	0.93
16	18	0.0016	0.17	13.8	1.5	2	23	909	930	908	930	0.96
17	18	0.0059	0.65	12.0	2.5	1	23	936	958	936	958	0.97
18	18	1.8e-06	0.0002	23.1	1.2	1	23	964	986	964	986	0.97

Sequence Information

Coding Sequence: ATGAAGTTCGATCTAATATGCAGAGTGTGCCTAAAGGAAGGCGAAATGAAATCCATATTTGACAGCTATAAGATAGAGAAAGATCGACCTGTTTACTGCTCAGAAATGCTCAACGTTTGTACAGCTACTAAGGTGTCCCCATCAGATGGTTTTCCCACACAGATATGCAGGCATTGTTTCGCCAAGTTGTGGTCAGCCTATAAGTTACGCCGTCTCTGTGAGACGTCGTATGAATATCTTGCAAATTATATCCTAGAAAACAAACACTCAGTGGAGAATATTAAAACAGAGGCCAATGATGATTGTCCATTGATTGATTTCGTGACTGGAGCTATCGAAAATGTTGATGATAAAAAAGAATCTTTTATTAAACTTGAAGCGCTACAAGATAATGATGATAAAGAAGATTTAGATCTCCAAGATACTTATGTTGTAGATCAGTTTGATGGGGATGATGCCAATGATGACTTTTATAATGAAACAAATAACTATGATGAGCAAACTGAAAATGAAAACAACAAGGAAAAACGAAAGAGGAATTTAAAGAATGAATCTTATATCAAAGATAAGAGTGTAAAAAGAATTGCCTGTTTAAGATGTCCAAAAAAATTTAGAAATCAATTATCCTATTTGAAGCATGAAGATAAACATTTGCTTTCTGATAATCCTGAATTGGAAAAACGTAAAAGTTTTGCCTGCCCACATTGTCCTGTCAAATTTAATTTTAAAGAAATATTATCAAAACATGAAAGATGTCATGTCGTCAGGAAAAAACATAATGCGATTCGTAAAGAAATGCCTTGCACGCACTGTTCTAAAACATTTAAAAATAAACTATGTCTTATGAAACATATCGATAAGCATTTAGGAATACAAACTAGTACTGAAGAAACGTTAGCTTGCACTTATTGCTCCAAGATTCTTAAAGATAGAACACTGCTTATGAAACATGAGGCTTCACATTTAGCATATCGTTCCGAGGTTGATCATAAAGCATACTGCGGCTTAGGATTGAGTTTCAAATGTGATGAGTGTTCCAAATGTTTTAAAACTAAGTCTAGACTGATAAGCCATATAGGGACGCATAATACCAATAGGAAAAAGTACATTTGTGATTATGAAGGGTGTGGAAAAATTTTCTTGTCTGCCCCTGGAATTTCGAAGCATAAAAAATTACACACTGGAGTCAAAATTATGTGCCATTTGTGTAGTAAGGAGTTTACTGATAAATATTTACTGGAAATGCATGTCAACAGGCATAATAACGAGAGGAAATATCCTTGCTCCTATTGTGAGAAGAGATTCTTCTCCTCAGGAGCTAAATTGGAACACGAAAGAAGACATACAAACACAAGAAACTTTGCTTGTTCTCAGTGTGACAAACGTTTTGTGTCCTCTACAAACCTCAAGAGACACATGCTGTGGCATGAAAAGAAGTTTGATGAACAGTGTCGATTCTGCGAAAAGAGATTCTTAGTTCGAGGAAACAGAAAGACTCACGAGGCCATCATGCACGGAGTGACTAAGACTGTAGACGAAAGTAAATATTTTTGTCAGCAAAGAATGAAAGCCACACGTCTTCCAAAAGTATCACTGTCAGATGGCTACCCTGCACATATTTGCAAACTTTGTATCACCAAACTATGCACAGCCTATAATTTCTGTCGTCTCTGTCAGACATCCTATGAATATCTATCTGATTATATACAGGAGAATAAGGGCACTATACGGGATGTAAAATTAGAAGATGAACGTCATATAATAGATTTCATGACTGTAGTTATTGAAGATGTGAAAGAAGTTATTGATGAATCTGAAGATAATAGGGATTTCAAAGTTGAACCACCACAAAGCAATAATGAAAAGGAAGACTTGAGTTTTAAAGATAGCTATCTCGATGGTCAGTTTTATAGTGATAAGGTTCAAAATGACAATGATAATGAAACTAAAGAACAAAGTATGCTCATAAACAAAGATAATGAAAATACAACACAAGAAGAAGAAGAAGATATGAACTTTTATAGTGACAATGAAAGCATAAAGAATGAAGAACATATTGATAATGAAAGCAGGAAACAGGAGAAAGAAAAATCAAAGAAAAAGAATGCCAAAGATAAATCCAAGTACAAGAAAAAAGATGAAAAAGAAAAATACTCGTGTAGACGATGCAATAAAAAATTTATAACTCAATTACCTTATTTGAGACACTTGGACAAACATTTGCTAACTGATAACCCAGATTTAGAGGAACGCGAAAAATTTACCTGTTCCGACTGCCCAGTTAAGTTTAATTTTAAAAAGATACTTTTAAAACATGTGAAGTGTCATGTTAGCAGGAAAAAACATTCTGTGAGTCGGGAAATAATGCCTTGCCCGCATTGTCCCAAGAAATTCAAAAGTAAAATGTGTCTTAAGAAACATATTGATAAACATCTAGGAATACAAGTGAATGAAGAAAAAATGGTATGTCCGTATTGCAATAAAAATGTTAAAGCTTATCGTTCTGAAGAGGATCACAAACCTGTCTGTAGCTTGACGTTTAGTTTTCAATGTAACGACTGCTCCAAATGGTTTAAAAGGAAAGACTCCTTAACTAGTCATGTCAAAATACACGATCCTAAGAGGAAGACTTACATATGTGATTATGAAGGATGTGGACAATCTTTCTTTACTGCATCTGGGATTTCGCAACATAAACAAAATCAACATTCTGGTGTGAAAAAAATGTGCCATTTGTGTAGCAAGGAGTTTTCAGATGGAGCGTATTTAAAAAATCATATTGACAGGCACAATAATATAAGAAGACATCCTTGCTCCTACTGTGATAGAAAATTTTTCACATCTGGCGCTCGACAGGAACATGAAAGAAGACACACAAACACAAAACCCTTTGCGTGCACCAAATGTGAAAAATCTTTTGTATCGTCTACGTCTCTCAAGAGGCACATGATGTGGCATGAAAAGAAGTTTGATGAACAGTGTCGATTCTGCGAAAAGAAGTTTTTAGTCCGAGGAAACAGAATAACTCACGAAGTTCTCATGCACGGTGTCACAAGAACAGTGGATGAAATCGTCTTGAAATTACCAAAGAATCACAAGAAACCATATATTACCTTCTCCAACACAACATCCCTCCAGGCAGGGCTTGGCTCTTGTCGTAACACATCATCCTTGAAGGGCAGTGTAAATGAATCACTGGGAGAattttgtgaagaggaAACCGAGACTCTTCAGCATTTCTTAGCAGATTGCAGTGCTGTGGGATTAGCTAGAATCAAAACCCTAGGCAGACACTGGGTAAAAGTGGAATCTCTTCACACCTTGGATTCTCTCAAGATCCTAGATTTCATAAGATATTTGAGACTAGAGGGCTAG
Protein Sequence: MKFDLICRVCLKEGEMKSIFDSYKIEKDRPVYCSEMLNVCTATKVSPSDGFPTQICRHCFAKLWSAYKLRRLCETSYEYLANYILENKHSVENIKTEANDDCPLIDFVTGAIENVDDKKESFIKLEALQDNDDKEDLDLQDTYVVDQFDGDDANDDFYNETNNYDEQTENENNKEKRKRNLKNESYIKDKSVKRIACLRCPKKFRNQLSYLKHEDKHLLSDNPELEKRKSFACPHCPVKFNFKEILSKHERCHVVRKKHNAIRKEMPCTHCSKTFKNKLCLMKHIDKHLGIQTSTEETLACTYCSKILKDRTLLMKHEASHLAYRSEVDHKAYCGLGLSFKCDECSKCFKTKSRLISHIGTHNTNRKKYICDYEGCGKIFLSAPGISKHKKLHTGVKIMCHLCSKEFTDKYLLEMHVNRHNNERKYPCSYCEKRFFSSGAKLEHERRHTNTRNFACSQCDKRFVSSTNLKRHMLWHEKKFDEQCRFCEKRFLVRGNRKTHEAIMHGVTKTVDESKYFCQQRMKATRLPKVSLSDGYPAHICKLCITKLCTAYNFCRLCQTSYEYLSDYIQENKGTIRDVKLEDERHIIDFMTVVIEDVKEVIDESEDNRDFKVEPPQSNNEKEDLSFKDSYLDGQFYSDKVQNDNDNETKEQSMLINKDNENTTQEEEEDMNFYSDNESIKNEEHIDNESRKQEKEKSKKKNAKDKSKYKKKDEKEKYSCRRCNKKFITQLPYLRHLDKHLLTDNPDLEEREKFTCSDCPVKFNFKKILLKHVKCHVSRKKHSVSREIMPCPHCPKKFKSKMCLKKHIDKHLGIQVNEEKMVCPYCNKNVKAYRSEEDHKPVCSLTFSFQCNDCSKWFKRKDSLTSHVKIHDPKRKTYICDYEGCGQSFFTASGISQHKQNQHSGVKKMCHLCSKEFSDGAYLKNHIDRHNNIRRHPCSYCDRKFFTSGARQEHERRHTNTKPFACTKCEKSFVSSTSLKRHMMWHEKKFDEQCRFCEKKFLVRGNRITHEVLMHGVTRTVDEIVLKLPKNHKKPYITFSNTTSLQAGLGSCRNTSSLKGSVNESLGEFCEEETETLQHFLADCSAVGLARIKTLGRHWVKVESLHTLDSLKILDFIRYLRLEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -