Acin007536.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- ZFX_2
- Assembly
- GCA_947579605.1
- Location
- OX388307.1:918546-938053[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.48 53 6.0 0.5 1 23 540 562 540 562 0.87 2 19 0.008 0.88 11.6 0.3 1 23 570 593 570 593 0.97 3 19 0.013 1.4 10.9 1.8 2 21 809 828 809 829 0.92 4 19 0.45 49 6.1 5.6 1 23 858 880 858 880 0.97 5 19 0.0022 0.24 13.3 0.1 1 23 917 941 917 941 0.91 6 19 0.27 29 6.8 0.8 2 23 947 968 946 968 0.97 7 19 0.24 26 7.0 2.5 1 23 974 996 974 996 0.97 8 19 0.87 96 5.2 0.7 2 20 1007 1025 1006 1027 0.91 9 19 1.4e-05 0.0015 20.3 3.2 1 23 1384 1406 1384 1406 0.98 10 19 0.36 40 6.4 1.0 1 23 1413 1435 1413 1435 0.93 11 19 3.7 4.1e+02 3.2 7.2 1 23 1477 1499 1477 1500 0.93 12 19 1.7e-05 0.0019 20.0 2.2 2 23 1509 1531 1508 1531 0.96 13 19 7.1e-05 0.0078 18.0 3.2 1 23 1558 1581 1558 1581 0.98 14 19 4.3e-05 0.0047 18.7 0.8 1 23 1598 1620 1598 1620 0.99 15 19 0.062 6.8 8.8 0.7 1 23 1625 1648 1625 1648 0.94 16 19 0.00046 0.051 15.5 3.6 1 23 1654 1676 1654 1676 0.98 17 19 0.0025 0.28 13.2 1.6 1 23 1682 1704 1682 1704 0.98 18 19 0.00023 0.025 16.4 0.1 1 23 1710 1732 1710 1732 0.97 19 19 0.0011 0.12 14.3 5.9 1 23 1738 1761 1738 1761 0.97
Sequence Information
- Coding Sequence
- ATGTCTCTAATAATCAGTTTAGAGAATCCTGATGGGGTTCAGGTGAACCTGGAAGTTTTCGCTCAGGACACGTTCCAGGAGTTTCTTACACGTGCCAGTGAAATCCTGGGTTATACTGTTACCCAATCCTGCATCTCGGGAGACAATCCAGTCTCTCTTACCGACAATGTGTACGATTATCTTCTCAAGATGGCGGGATTACAGCAGGAGGAGGAACAGGAATCGGACTCTATCCTTCCGGAATTGATGGAGGACGAATCGCAAGAGGTTCATCTCGATACCGCTATTGAGGTGAGCGATTTAAATGGAATGCCCTGTGAAGATGATCTTAGCAATTCAGGAATTAATGAAGCATATATTGAATCCAGCCAAACACAGGTGGAAGAAAATGATTCTTCACTCGATCCTCCAGAAAATGAACAACTTACAAATAATACTGATAATCAACAAGGTTTTGTGGAAGGAAACGAAGTCGGTTCTACTCAAAATACTGATAAAACTAAAGTAGAAAATGTAAATTTAGTTGAAAAGAGAAAGATTGAATGTGAATTGTTGAGTATTATAAATAAATCCGCTGGCGTTGTGAGGACGTTGAAGTTGAACGACTGTAACAGTGATAGTAGTGATCGCCCTGCTACAACAGATGCGGAAGAAAATTATGAAGAAGAATGTGAATATTTAGAAGAGCATTTGGATGAACCCGCTGATGATGAAAGTGATAACATGGAAGAAGGAGAAGTCATTAACGACAGTAATGTGGATAGTCTGAGTTATACCGGAAGCATGAGTAGTGCCAGTAACTTTAAAAGTGGAGGTTCCTTGAACACGGCAAGTATCGGAAGTATTGCAAGTAATAATAATAAAAAAAAGTTCATAAACGTACAAAATGTCGAAATACAAGATGATTCAGATCAAAATCTCCCGGTTTATGATTCAGACGATAATTATACTGATGTAGAGTTCCTAGACGAAGATATCTTGCAGGAGGATATGCCGAAACCTGCACTTTTGATAAAGGAAGAGATCAAAGAACCTGATTTAGAAGATGATATTGATTCGTATACGATTGTTAAACCTTCGCAAAGTGAAAAAGCGAAAATGAAAGCTGCGAAAGGAGAGAAAGGTAAAGATGCGGATATGGACAGGGAGCTGAACGAAATTCTCAAAGCTTCTGAAACTGAGACGACAGAGAAAATAGATCTCAAACCGAAACAGAAACCTGTGTACACTAGACAAGAACTGCTGGATTTGTTAGAAGGCTCTTCTGATTCTGAAGCGGATAATAAAAAACAAAGTAAGAAAAGGAAACTTGCCGCCGAGGAGAAATCAAAGAGCAGTGCGTACATAAAACAAGAGAAACTCAACAAAAATGATTTCTCAAAGGAGTTTGAGAAGATTGCTAAGATGGGCTCGGCAGCTTATGATATCAAGTCAATTAAGGATGAGCCACGTACAAATATCGATAGCCGTAAAAGGAAACCTCATAGAAGCGTTTCTGCGGTTGAAAATAAAATTTCTAAGAGCGATAAACCGAGAGCTTCCCCACTGAGGCCACAAGCGGTTCAAAAGGAAGAACCGTTTGATAGTCTATACACTGATGAAACAATTGTTGGAGGGTACCCTTGTAGGTTGTGCAACAAGACTTTTGACAAACTACTGTTTGCCATCACCCACACTATGGTGCACAAGTTACCTGACAGATCAGTCTATCCGTGCGTACTGTGTCAGTATGGTTTCACATCATATCCCCAAGTAAGGGATCATATGAAACGGGACCACATTAGAGGAGCCAACATTTTAACATTCGTCAGCAAAAAGGAAAACAAGAAAAAGTCAGTAGACAGTAGTAAGGTCATGGCAACGTCACCTGTTGCACCTGTGCAAGAACCTGCGGTAAAGGAGGTAAAACAGGATGTTATCAAGCAAGAAGTAGAATTACAAGAAGAAATGGACGAAGAGGAATGGTTGGAGGATGAAATAGAGATGTTGGAAGAGTGGTTGGAAGAAGATGATACACAACGGGCACCACTACCAATGAAAGATCAATCTAGCAGCTGCATTAAATACAGACTGCAGACGATTCTGTTGACTTGCTGGCAAACCAATGTACACCCCATTACAATAATCAAGTCTGGAAAGTACAAAGGCTCCGACAAGAGTCTTGTCCTCCTCAACAGGCAGACACCTCCCGACACTCCTTATTGCCTGAGATGGAAAAATCACGAACTTACCGTCCTAGATACATGGGTATCAAGAGAGAAAGAACCGGAGACACAAGAATCCGTTACCTCGTCATCCAGTAACGTGGGAGACTTTGACAGTCTCTTGGAGGAGCAGTATCAAGATGAGGTGTGGGAGCCGCCGGTGAAGCATGCCAAACAGAAAGTCAGCAAAGTGGAAAAGAGTTCAAAGATGACACTAAATTACTGTCCACGGTGCAAGAGAAAGTTCCGAGACGCATCAGCATTGTTCATGCACACCTGTTCTATTAATTCAAATCAAGAGAATGATGCTACAGTTCTGATTGTTGGTGGCCAAGCGAAGAAGGAGGATCTAACAAACTTGGAGATACATCGCTGTGCCCTCTGCGGACAGTGCTTCCATACACCCAGAAGACTAGTCTATCACAGGAGTGTCCATCAAGCGGAGTTGATAGCCATGGACCTCTGCTGTCAGGAGTGTGACAGAACTGATTTCCAAAGTGAGATATCTCTGTATGATCACATCAACGAGGAGCATAATCATCTCTTCATGTGTGTCGAGCCAGATTGCGGCAAGGAGTTTCAACTCAGATCTTCCCTCAAGATTCACATGGGGGTCCATGGAAGGAAGAGACTCAAGTGTGATGTTTGCTTGAAGCAGTTCCTTGACTCGCAGACTCTTAAGGATCATAAGATTACTCACCTTAAGGTGAAGCCATTCCAATGCCACATTTGCTTGAAGTTCATTAATAGACGCAATCGTCTCCGCATGCATCTATTGGCTCACGAGGCACGTCCAAGTAAGAATTCAGTGTTGAATTGCCGACACTGCCACATGGCTTTTAGGACTGTGGATGATGCAAAGTACCATATATTTGAAAGTGAAGTCTGTCGCTTAAATTTGGATCCAAAATTAGAAGTGAACTTAGCGCAATTTATATCAAAAGATCACGATGATCAAGTGGAGATAGATCTAGAAAGGTTACTGGGGGAAGGCAGTACTGATGATATAAGTATGTTGAGAGACAACCAGACTAAGCCCAATACTTTGCAAGGCATCACCGATGATCTGCAGAGAGATCTTCACGAGTTGAGCAATCACGCTGACGAGATCACCGAAGAAGAAAATCAAGATAGCAATGTTTTAATCAATGAACTTATTGAAAAATCAACAAGTGAATTTACCAATGATATGAATAGTTCGGATACCATATCTAATAGTGTTGAAAAGACTGGTGAAATCGGGAATACCAAATCTCGTGACGGTGAAAGTGGTAGTACCGAATCTTATGACGGTTTAAGTGGGAATACCGATACTTCCGATGGTGTTAAAACTGGGAATGCCGAATCTATGGATGTAAGTGAATGTGTTCAAAATGAATCTGTAAATAATAGTAGTAGTGCGATATCAGGGAGTGATGTGAATACCGAATCTATGGAAGTGAATGAAATTGGGGAAATTGATTCTGTCAATATTGGTAACACCGTTGCTGGGGATTTTGGCAACTTAGGAAATTCTGTTTCTGAAGAATTAAGTAGTAAAGAAAAGTCAAGTCATTTGAAGAATACCGATTCTAAAAGTATAGGTATTGCGGGGCATACCGATTCTAATGTAAATAGCATCGGGAATACCGAGTCTAGAGATGCTGGCATAGGAGGGAATACCGAATCTAATGTAAGCGGTGCTGGGAATACCGAAAGTGATGAAAATCTCAAAATTGTAAAAATGAGTAACAATACAATTGAAAATGGAGAAATTATTTCTAAAGATGCTATTAAGGATATTAGGAAGCGAGAGAAAAATTCTAAAGCCTTGTTACCCGGAGAGGATGAGATACAAGAAGAGGAAGAGAATCTTGCAGAGAACTTTAAGAGAGTCGACGAACTGCTGGCCGAGCTGCCTGAAACTTTGAAAGTGTTTATTGGAGCTGAACAACTGTTGATGGTCTTTAGATGTGAATACTGTGAAAAGGTGTTCTGCACAAAGGACTCTTTGAATCAGCACAGAGAGATTCATAAGAACAAGGTGCTGCCCTTTGAGTGTAATGTCTGCAAATTGACTTTCGAGACATTTGCCAGGGTAACTTCCCACAAAGTTCGTCACGGCTTCTTCAAGCTGAAGACCACAGCCGAGGGGGATATTGAGGCGCTGGAAGAGGACGGACAGGTGAGGGAAAAGAGTGCCTCTCAGGTCAGCGGGTACAATCCATTCCCTGTCGTCAAATACTTTTTATGCCAGTTGTGCGGACGCACATTCCTCCACCACACATATTATTCTGTGCACGTGCGTAAGCATCACGCAGCACCTGGGGAGAGCTCCATACCTTGCCCCACGTGCGACAAGAGTTTCCCCACCAAACATCTGTTGCACACGCATCTCAGGAGGGCACATATCGGAAGACAGAAACTGCTAGTCCAACAACAGCAGCATAATTCATATCAAAGGAACACTAAACCAATAAATACAAACTACAGATGTATGGATTGCCACGAGAACTTCACAACTCGCAAGAGCCTCTTGAGACATCAGAAGGTGGTACACAGTGAAATGGCAATGTGGAGCGACTCATTCTTCAAGACACAAGGGCCTTACACATGTAACGTTTGCCATAAAGTTTACCAGACCAAAGCCGGACTGCAGGGACATATTAGAGTACACAATGGCATGCTGTTTTTGTGCGCGCTTTGTGGAAGTGGATTTGCACATCAAGCGGGGCTTGCTACGCATCACAAGCGTGTACATTTGCGTGACTACAGTCACAAGTGTAATGAGTGCGGTTGCAGTTTCTTTTCATCTGCAGAGTTACTGACGCACGTGCGCAACCACACTGGAGAGAAGCCGTACCCCTGTCTATATTGTAACATGTCATTCCGTACCAACAGTCGTAGGAGCGAACATCAGAGGATCCACACTGGCGAACGTCCCTTCCCGTGTGACATCTGCGGGCTGGCGTTCCGTCGCTCCATCGCAATGAAGAACCACCGTCTCATCCATACGGGACACAGGCCTCACGTCTGTCAGTTTTGTGGCAAGCAGTTCCATATTAAGTCTAACCTCAGGACTCATATTAAAACAAAGCATTCCACAAAGTACATCGTCATGAAGGTGAAAGGTGGTCCTCTGGAGCGTGCTGCTTTCGAGGAATCCCTCAATTCTCTTTTGGGAGTAGCGGAGGAGGACGAAGGTGACACCACAGATGCGAAAGAAAACTTTAATACTGTTGAAATTGAGGTGCCTTTAATAGAAGAGACGACTCCACAAGACTCTCAGATGATTCTTTCAACACTGAATTCTGTCGTTGAAGGATCACAGTATATTGTTTATCAGACTGAAACTGTCGAAGATGTAGGTGAAGGTCAGAATGTTCAGGAATATGAAATGGAGGAGTTAAAAAGGGAAGATGGAGGGCTTAAATATCATGTTAAAATTTTGCCCTCGTAA
- Protein Sequence
- MSLIISLENPDGVQVNLEVFAQDTFQEFLTRASEILGYTVTQSCISGDNPVSLTDNVYDYLLKMAGLQQEEEQESDSILPELMEDESQEVHLDTAIEVSDLNGMPCEDDLSNSGINEAYIESSQTQVEENDSSLDPPENEQLTNNTDNQQGFVEGNEVGSTQNTDKTKVENVNLVEKRKIECELLSIINKSAGVVRTLKLNDCNSDSSDRPATTDAEENYEEECEYLEEHLDEPADDESDNMEEGEVINDSNVDSLSYTGSMSSASNFKSGGSLNTASIGSIASNNNKKKFINVQNVEIQDDSDQNLPVYDSDDNYTDVEFLDEDILQEDMPKPALLIKEEIKEPDLEDDIDSYTIVKPSQSEKAKMKAAKGEKGKDADMDRELNEILKASETETTEKIDLKPKQKPVYTRQELLDLLEGSSDSEADNKKQSKKRKLAAEEKSKSSAYIKQEKLNKNDFSKEFEKIAKMGSAAYDIKSIKDEPRTNIDSRKRKPHRSVSAVENKISKSDKPRASPLRPQAVQKEEPFDSLYTDETIVGGYPCRLCNKTFDKLLFAITHTMVHKLPDRSVYPCVLCQYGFTSYPQVRDHMKRDHIRGANILTFVSKKENKKKSVDSSKVMATSPVAPVQEPAVKEVKQDVIKQEVELQEEMDEEEWLEDEIEMLEEWLEEDDTQRAPLPMKDQSSSCIKYRLQTILLTCWQTNVHPITIIKSGKYKGSDKSLVLLNRQTPPDTPYCLRWKNHELTVLDTWVSREKEPETQESVTSSSSNVGDFDSLLEEQYQDEVWEPPVKHAKQKVSKVEKSSKMTLNYCPRCKRKFRDASALFMHTCSINSNQENDATVLIVGGQAKKEDLTNLEIHRCALCGQCFHTPRRLVYHRSVHQAELIAMDLCCQECDRTDFQSEISLYDHINEEHNHLFMCVEPDCGKEFQLRSSLKIHMGVHGRKRLKCDVCLKQFLDSQTLKDHKITHLKVKPFQCHICLKFINRRNRLRMHLLAHEARPSKNSVLNCRHCHMAFRTVDDAKYHIFESEVCRLNLDPKLEVNLAQFISKDHDDQVEIDLERLLGEGSTDDISMLRDNQTKPNTLQGITDDLQRDLHELSNHADEITEEENQDSNVLINELIEKSTSEFTNDMNSSDTISNSVEKTGEIGNTKSRDGESGSTESYDGLSGNTDTSDGVKTGNAESMDVSECVQNESVNNSSSAISGSDVNTESMEVNEIGEIDSVNIGNTVAGDFGNLGNSVSEELSSKEKSSHLKNTDSKSIGIAGHTDSNVNSIGNTESRDAGIGGNTESNVSGAGNTESDENLKIVKMSNNTIENGEIISKDAIKDIRKREKNSKALLPGEDEIQEEEENLAENFKRVDELLAELPETLKVFIGAEQLLMVFRCEYCEKVFCTKDSLNQHREIHKNKVLPFECNVCKLTFETFARVTSHKVRHGFFKLKTTAEGDIEALEEDGQVREKSASQVSGYNPFPVVKYFLCQLCGRTFLHHTYYSVHVRKHHAAPGESSIPCPTCDKSFPTKHLLHTHLRRAHIGRQKLLVQQQQHNSYQRNTKPINTNYRCMDCHENFTTRKSLLRHQKVVHSEMAMWSDSFFKTQGPYTCNVCHKVYQTKAGLQGHIRVHNGMLFLCALCGSGFAHQAGLATHHKRVHLRDYSHKCNECGCSFFSSAELLTHVRNHTGEKPYPCLYCNMSFRTNSRRSEHQRIHTGERPFPCDICGLAFRRSIAMKNHRLIHTGHRPHVCQFCGKQFHIKSNLRTHIKTKHSTKYIVMKVKGGPLERAAFEESLNSLLGVAEEDEGDTTDAKENFNTVEIEVPLIEETTPQDSQMILSTLNSVVEGSQYIVYQTETVEDVGEGQNVQEYEMEELKREDGGLKYHVKILPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -