Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388326.1:14461031-14471658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 2.5 2.7e+02 3.7 3.5 1 20 183 202 183 204 0.93

2 31 0.012 1.3 11.1 0.3 2 19 244 261 243 264 0.92

3 31 0.011 1.2 11.2 0.6 2 22 291 311 290 311 0.94

4 31 0.61 67 5.7 0.9 2 20 352 370 352 372 0.92

5 31 0.015 1.7 10.7 0.5 2 23 383 405 382 405 0.95

6 31 0.00076 0.084 14.8 0.1 2 23 438 459 437 459 0.94

7 31 0.0015 0.16 13.9 5.9 1 23 494 516 494 517 0.95

8 31 0.0012 0.13 14.2 0.3 1 23 535 558 535 558 0.91

9 31 2.1 2.4e+02 3.9 0.1 1 23 613 635 613 635 0.96

10 31 0.064 7.1 8.7 0.2 1 23 767 789 767 789 0.98

11 31 0.15 16 7.6 0.2 2 23 800 821 799 821 0.97

12 31 4.2 4.6e+02 3.0 0.4 3 23 834 854 832 854 0.90

13 31 1.7 1.9e+02 4.2 1.8 2 23 861 883 860 883 0.92

14 31 3.6 3.9e+02 3.2 3.3 1 23 905 927 905 927 0.87

15 31 5.7e-06 0.00062 21.5 2.5 1 23 938 960 938 960 0.99

16 31 0.0016 0.18 13.8 1.4 1 23 967 989 967 989 0.98

17 31 0.1 11 8.1 0.1 1 23 1001 1024 1001 1024 0.97

18 31 0.00053 0.058 15.3 0.4 1 23 1045 1067 1045 1067 0.96

19 31 0.0014 0.15 14.0 2.0 2 23 1107 1129 1106 1129 0.93

20 31 0.023 2.6 10.1 3.1 1 23 1151 1173 1151 1173 0.97

21 31 1.9 2.1e+02 4.1 0.2 2 19 1177 1194 1176 1197 0.87

22 31 0.16 18 7.5 2.8 2 23 1216 1238 1215 1238 0.96

23 31 0.12 13 7.9 0.6 2 23 1254 1275 1254 1275 0.95

24 31 0.0013 0.14 14.1 2.3 3 23 1284 1304 1284 1304 0.99

25 31 0.034 3.7 9.6 0.2 2 23 1315 1337 1314 1337 0.94

26 31 0.071 7.9 8.6 0.9 2 15 1354 1367 1354 1372 0.84

27 31 0.16 17 7.5 0.3 2 23 1431 1452 1430 1452 0.96

28 31 0.1 11 8.1 0.7 3 19 1460 1476 1458 1480 0.94

29 31 0.0029 0.32 13.0 0.3 3 23 1492 1513 1491 1513 0.97

30 31 1.4 1.6e+02 4.5 0.7 3 12 1530 1539 1529 1545 0.90

31 31 5.9 6.5e+02 2.6 2.2 1 20 1550 1569 1550 1571 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	2.5	2.7e+02	3.7	3.5	1	20	183	202	183	204	0.93
2	31	0.012	1.3	11.1	0.3	2	19	244	261	243	264	0.92
3	31	0.011	1.2	11.2	0.6	2	22	291	311	290	311	0.94
4	31	0.61	67	5.7	0.9	2	20	352	370	352	372	0.92
5	31	0.015	1.7	10.7	0.5	2	23	383	405	382	405	0.95
6	31	0.00076	0.084	14.8	0.1	2	23	438	459	437	459	0.94
7	31	0.0015	0.16	13.9	5.9	1	23	494	516	494	517	0.95
8	31	0.0012	0.13	14.2	0.3	1	23	535	558	535	558	0.91
9	31	2.1	2.4e+02	3.9	0.1	1	23	613	635	613	635	0.96
10	31	0.064	7.1	8.7	0.2	1	23	767	789	767	789	0.98
11	31	0.15	16	7.6	0.2	2	23	800	821	799	821	0.97
12	31	4.2	4.6e+02	3.0	0.4	3	23	834	854	832	854	0.90
13	31	1.7	1.9e+02	4.2	1.8	2	23	861	883	860	883	0.92
14	31	3.6	3.9e+02	3.2	3.3	1	23	905	927	905	927	0.87
15	31	5.7e-06	0.00062	21.5	2.5	1	23	938	960	938	960	0.99
16	31	0.0016	0.18	13.8	1.4	1	23	967	989	967	989	0.98
17	31	0.1	11	8.1	0.1	1	23	1001	1024	1001	1024	0.97
18	31	0.00053	0.058	15.3	0.4	1	23	1045	1067	1045	1067	0.96
19	31	0.0014	0.15	14.0	2.0	2	23	1107	1129	1106	1129	0.93
20	31	0.023	2.6	10.1	3.1	1	23	1151	1173	1151	1173	0.97
21	31	1.9	2.1e+02	4.1	0.2	2	19	1177	1194	1176	1197	0.87
22	31	0.16	18	7.5	2.8	2	23	1216	1238	1215	1238	0.96
23	31	0.12	13	7.9	0.6	2	23	1254	1275	1254	1275	0.95
24	31	0.0013	0.14	14.1	2.3	3	23	1284	1304	1284	1304	0.99
25	31	0.034	3.7	9.6	0.2	2	23	1315	1337	1314	1337	0.94
26	31	0.071	7.9	8.6	0.9	2	15	1354	1367	1354	1372	0.84
27	31	0.16	17	7.5	0.3	2	23	1431	1452	1430	1452	0.96
28	31	0.1	11	8.1	0.7	3	19	1460	1476	1458	1480	0.94
29	31	0.0029	0.32	13.0	0.3	3	23	1492	1513	1491	1513	0.97
30	31	1.4	1.6e+02	4.5	0.7	3	12	1530	1539	1529	1545	0.90
31	31	5.9	6.5e+02	2.6	2.2	1	20	1550	1569	1550	1571	0.89

Sequence Information

Coding Sequence: ATGTCCCTAGTACTTAAGCTTAGCAAGTGCCGCTTGTGTCTCAAGCTTGGCGATTTTTACTCGATTTTCGCTTCGGATAGTTCAATACAGCTTGCTAATATGGCCATGGCTTGTTCGGATATAAAGATATATGAAGGAGATGGCCTACCAGACAAGATATGTAGCGAGTGTATTGAGAAGCTTAGTTCTGCGTATATATTTAAACAACAGTGTGAAAGATCTGATACCGAACTGAGGAAAACATTGCTGAACAATTCAGGTTCTGCAGAAATATCACCATTTGGACGCAGAAATTCTGACTCTGGTTTTTCCAACCGCACAGATGGTTCTACTTCCAAGAAAGATGTTCCGCAACGACCAAGTCGCGGAAAAAACACGGATGTGTCTCTAGACAAGTCTTATTCTGAAATAACACTGTTAAAAGAAAGTTACAGTGTGGATGTCCAAGATCCGCTGAGCTACGAAGGAATACAGACCCAAAGGCACAGCAAAGCAAAGTCTTCAGATTCGAGAAGCAACAGTCCAGCCGTTAGCGAGTTGGCGAGATTTCAATGTCAACGCTGCAATAGAACATATCTAAGTGCCAAATCATTACGTACGCATTCATGTAAAAATATATTGAACGAAGATGTACGTGATGAAACTTCGTCACAGGATTCAGTAAAAATTATTAAGACGGAAAGTATCAGCAAGTCCGAGAATGCAAACAGTAATAGTAACAGCGAACTGTCTTGCGAGAAATGTGGGCAACAGTTTAAATTCAACATCATGTTGAAAAGACATAGTTTGGTATGTCAGGCGAGTAAACCTGTCGCAGTTAAGAGAAAACGGTCAAGTCCTAGTTTACCAGTCATACCTCCCGGCAGTCTTCGATGTCCCATTTGTAATAAGCTGTTTAAGAAACGTATTTACGCCACCAGACATCTTCGTCGGTCGGGTTGCAGTCTGATTGCGAAGAATCTCGCAGGCGGTGCTACTCTAGTCGCAAACAAACCTAAGATAGTCGTAAATAAACCTAAATCTTGGGAAGATGCCTCTACAGCGTTTCAAGCGGAGTGTTCAATATGTACGGCGAGATTCTCATCTCATATGTCAATGTTTAAACACTTCCAGTTGTGTTACAAGCGGCGGGGGCCGGCTCCTATCGTGTGTAAGGCCTGTAACACGACGTACACGAGAGTCACGGGACTCTATAAGCATATTAGACTGCGACATCTTGATGGGAAGAAAGGAAAGACAATCACGCCACTTCTGCAACCAAAGAAAGAACCCATTTCTGGTGACGAGCAGCGCATTACTGGTGGTAAATTGAAGTGTCGGGAGTGCGAGAAGACCTTTGAGGACCAGGGTCAGCTGGTGATGCACCTGGCCGCTCATATGGCCAATATAAATGAACCAACCAAGAAAACTTTACAACATCCTGCTGTACAATCTCTCGGAGGCAAGGCAGCCAGGCCTGCCAGCCCAAAGTATCCAGAATTTGAGTGCAAAGAGTGCTACAAGAAATTCAGGTACAAGGCTAGCTTTCGCTCTCATCTCCAAAACCACCACGACTATAGTATTGAAGATCTCAATCAGATGGATAAAGACGAACCTTCAGTTTACCAGTGCGACATGTGCGAACGGGCCTACAAATCGGCAAAGTCACTTAAAATTCACAAAGCAGCCTCACATAGTGTTAGAAAGTTGCCGTACGTCGAGATGCGAGAGCCCATCTCACTAGCAGAGTCCCCTATGAAGTGTCTCTTATGCAATGTGATTGTGGAAGGGAGTTTACGTGATAAGAAGGATCATAATATTATGCATATAAACAAGAATGAAAAGCCAAAGAATGAATACGAGTGTCCTGCGTGTCGGGATATCTTCGTCAATAGAAAGGATTTTGGGACTCACATAGCCCAACACAACAGTGACTTCAACAAAAGCAAGAGAGACTTGTTGGAGCAAGGACAAGACGCAGAAGGTGGCGAAGAAGCAGAAGAGCAGCAGGAGGATTCGTACATCACGGGAGACATGGATCATCAGTACGAGGACGAGGCCGCAGCGGAAGAAAACCCAGACAGTGGAGAAGGAGAGATTGACAGCGAAAGAGAGGAGATAAACGCAATGGATTTTTGTGAATCAGTCGTTGCTAATATAAAACAAGAGGAAGACGAGGACATCATCACGGATAGTGGCAAGATAACATCAATGGTAAATCTATCTACTACATCACCTAGTCGTAGCGGACGCGGTGTCGTTTCTACGATGCCAACTTCTACTCCCACGCATCAGAAACTAGTTGTCGCTTTGGGGGGGTTCACGTGTGCCTTGTGCAACGCATCGGTTGACACATACATGGCATATCAGGAGCACATGAAGATGCATCAGGAGACTGGGAAAGTTGAGACCAACAATAAATGTGCCATCTGTGAGCAGGAATTCCCATCTGGGAGGCAGATGAGGATGCACATCAAGGAACACACGGATGCAGCCGAGAAAGATCCCTCTGTCCTAGCCTGTAAGGAGTGCGGCAGGTACAACAAGAATCTAAGAGCGTTCACCGCTCACAATAACTGGCACATCTCAATGAAGGAACTCAGGTGTCATATCTGTCTTAAACAGTTTGCAAAAAGAGGGATTCTTCTAACTCATTTCAAAATAAGACACGCAAATAAAAATCAAATATTAGATCCGTTTGAGGATATGGATCAATCTAATGAAGTCACTCCTTTCCAGTGCCATATTTGTAATAAGTATATGAAGACAGCAGTCTCTCTGTCGTGCCACGTTCAGTGGCACAGCTCCAAGTCCGCAGGTGCCCTTAAACGATACCAGTGCACTCATTGCCCATACGCTTTCACCAATAAATCCCGTTTAGCGTTACATCTCAGAACTCACCAGACTGCAGTCACACCATTTAAGTGTACCAAGTGTGGACTATATTTCATCAATGAGCGAAAACTTAACTATCATGTTAGAGGTCATGCCATAGGTGGCGTTAATAAGAGAAAGAGAAAATATAGATGTCCTGTATGTGAGCTCCTCTTTCCAGATATGCTCAAAGTGCAGAGACACATAATGAGATCACATCCCGAAAGTAAAATGGTCAAGAAACGAGATCCGGGAGCTGACGATCTGCCTAAGATTAAATACATTTGTAAAGTGTGTGGAAAAGAATTTGGTACTCAGCAGAAATTAGATAGACACGGCGAACGTCACACAAGAAAACCAACATTCCTCATTTGTAGCTTGTGTGGAAAGCGAAATATATCTAGAAAGTTGCATATGCTTCATTTGAAAGGTCATATGTGTCAGAAGTTTAAAGACGATCCTCTTCAGTGCGCACATTGCGATAAGAAGTATGTTCGCAGGCAAGATTTACATGTGCATATGTACGAAGCACATGACATTTTGGAGACATACACCCTTACGACGGACGATAGAAAGAAGCTAGACAGCTCTAAAGAATACCAATGCCATGTTTGTTTTAAGACACTCGCAAAAGAAAGCACATTCCTCAGACATTTAGACTATCATAATTCAATGAGATGCAATTATTGTTTGAAATATTTTAATTCAAAAGTATTTATGGATGCTCATGTTGCTTATGATTGCGACAGGAAGAAAGTTCTCAATGGGGGAGATCCATTTGAAAAGAAATTAAAGTGCTCCGATTGTTACAAAGCTTTTTCTTTGCCAATAAAACTTAGATGCCACCTTAAAACTAAACATAATAAAGATTTAGAAGAGAAATGTTTTAAGGAAGAGCAGATGGCGACGTGTGATTTTTGTTTCACGTCATTTAACACTGAAGCTGACGTAGAAAAACATAAATATGTACATTCGCGCACGGGCAGTTATTGGGGATGTAAGAAATGTCCGAAGAAATTTGTAAACCTACAATATTTCTATAGACACATAAAGAGTCATATCAATCGCCACCACATAGAAGAACCATTGCAGTGCGATGATTGCGAGGAGAAATTTGTTTATTATAATGATTACTCAAGTCATTTGAAAGACGCACACAATAAAGAAGTAGATTGGACCATACCACCGCAGGACTCTCCCAAAGAGGAGTGTCATATTTGTAAGAAAGTCTTCTCACGTCTTCACAATCATTTAATGTACCACGAAAGGTGCAGATGTAAAAAATGTAAAGAATATTTCACTGCTGACTATTTGTTAGAATCTCATTGCTGCCTTGTCGAGAGTGATGACGAACCTACAACTTCTGTACCTAGTGGAGATATCAGAAGATTGTCTGCGAACGAATTGTCGTACAATGCACCCCTAGAACCTTACCAAGAATGCGAGTTTTGTTTTAAACCATACACAGTAAATTACACGGCACAGAGACACGTCATTTCGCACACAAAGTTACTGCAATTTGGTTGTCTTTACTGCGATAAGACATTCACTGGATTAACTCTATTCAAAGCACACTCACCATCACATCGTTTTCGTCATTACAAAGATAATCCATTGCTTTGCAAGTTTTGCGGAGAAACATTTATCAAATATGGTTTGTATATAAGACATTTGCGACAAGCCCATAACGAGAAAGAGAGCATGATATTGAGACCGTCTTTTCCCATAGAGGACTGCAAGATATGTAAGCGATCTTTCAAAAATATACATTACCATTATAGATTTCATAAACAGTTTCAATGTCAGGACTGTAAGAAATATATTATGTCGGAAAAGCTGTTTAATTCTCACGTCTGTAATGATCCTAATGAAGATAAAAAATTGGTGATTGAATACAACGAAGATATAACGGAATTAATGGAAGGAAAGTTTGACTATGCAAAATTAAGACATAGACAAATTGATAAACCAGCAGCGGCAACAATAGACAATAATAAAACTTTGAATAGTGTAAAAGAGTTGTCAAATCTCGAAATAAGCGAAACTGAATTGAGCAATTCTGCATTAAGTACGATTGATATGACAAACATATCTCTTTCCCCCGATATAACTGAATCTAATCAAGACATGATCGTCTCGATCCCTGATCAAGTCGTCAACAAAATGTTCAATCCGAGCAATAGCACTTTTGGTAATTTTACACCAGTCATATCGTCCACAATTTCTCTCTGCAATCCTCCCGAGACGAGTAGCAGTAATATTGACGATATCACAATCGAAAGCATCAATAGCGATTCACAAAACGCTCGTTGCAATATGGACACAACTATGACACCGGAATCTTCGGAGGAGATACAGAAAATCGTTGACGATTTAGAAAATAGTTTTCCTATTATGATAGACAGTACAAACTCAAGTAGTGAATTGCCTGACTGCACTGATATGGAGTGA
Protein Sequence: MSLVLKLSKCRLCLKLGDFYSIFASDSSIQLANMAMACSDIKIYEGDGLPDKICSECIEKLSSAYIFKQQCERSDTELRKTLLNNSGSAEISPFGRRNSDSGFSNRTDGSTSKKDVPQRPSRGKNTDVSLDKSYSEITLLKESYSVDVQDPLSYEGIQTQRHSKAKSSDSRSNSPAVSELARFQCQRCNRTYLSAKSLRTHSCKNILNEDVRDETSSQDSVKIIKTESISKSENANSNSNSELSCEKCGQQFKFNIMLKRHSLVCQASKPVAVKRKRSSPSLPVIPPGSLRCPICNKLFKKRIYATRHLRRSGCSLIAKNLAGGATLVANKPKIVVNKPKSWEDASTAFQAECSICTARFSSHMSMFKHFQLCYKRRGPAPIVCKACNTTYTRVTGLYKHIRLRHLDGKKGKTITPLLQPKKEPISGDEQRITGGKLKCRECEKTFEDQGQLVMHLAAHMANINEPTKKTLQHPAVQSLGGKAARPASPKYPEFECKECYKKFRYKASFRSHLQNHHDYSIEDLNQMDKDEPSVYQCDMCERAYKSAKSLKIHKAASHSVRKLPYVEMREPISLAESPMKCLLCNVIVEGSLRDKKDHNIMHINKNEKPKNEYECPACRDIFVNRKDFGTHIAQHNSDFNKSKRDLLEQGQDAEGGEEAEEQQEDSYITGDMDHQYEDEAAAEENPDSGEGEIDSEREEINAMDFCESVVANIKQEEDEDIITDSGKITSMVNLSTTSPSRSGRGVVSTMPTSTPTHQKLVVALGGFTCALCNASVDTYMAYQEHMKMHQETGKVETNNKCAICEQEFPSGRQMRMHIKEHTDAAEKDPSVLACKECGRYNKNLRAFTAHNNWHISMKELRCHICLKQFAKRGILLTHFKIRHANKNQILDPFEDMDQSNEVTPFQCHICNKYMKTAVSLSCHVQWHSSKSAGALKRYQCTHCPYAFTNKSRLALHLRTHQTAVTPFKCTKCGLYFINERKLNYHVRGHAIGGVNKRKRKYRCPVCELLFPDMLKVQRHIMRSHPESKMVKKRDPGADDLPKIKYICKVCGKEFGTQQKLDRHGERHTRKPTFLICSLCGKRNISRKLHMLHLKGHMCQKFKDDPLQCAHCDKKYVRRQDLHVHMYEAHDILETYTLTTDDRKKLDSSKEYQCHVCFKTLAKESTFLRHLDYHNSMRCNYCLKYFNSKVFMDAHVAYDCDRKKVLNGGDPFEKKLKCSDCYKAFSLPIKLRCHLKTKHNKDLEEKCFKEEQMATCDFCFTSFNTEADVEKHKYVHSRTGSYWGCKKCPKKFVNLQYFYRHIKSHINRHHIEEPLQCDDCEEKFVYYNDYSSHLKDAHNKEVDWTIPPQDSPKEECHICKKVFSRLHNHLMYHERCRCKKCKEYFTADYLLESHCCLVESDDEPTTSVPSGDIRRLSANELSYNAPLEPYQECEFCFKPYTVNYTAQRHVISHTKLLQFGCLYCDKTFTGLTLFKAHSPSHRFRHYKDNPLLCKFCGETFIKYGLYIRHLRQAHNEKESMILRPSFPIEDCKICKRSFKNIHYHYRFHKQFQCQDCKKYIMSEKLFNSHVCNDPNEDKKLVIEYNEDITELMEGKFDYAKLRHRQIDKPAAATIDNNKTLNSVKELSNLEISETELSNSALSTIDMTNISLSPDITESNQDMIVSIPDQVVNKMFNPSNSTFGNFTPVISSTISLCNPPETSSSNIDDITIESINSDSQNARCNMDTTMTPESSEEIQKIVDDLENSFPIMIDSTNSSSELPDCTDME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -