Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388316.1:16642525-16644546[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.15 17 7.6 2.4 1 20 191 210 191 212 0.82

2 12 0.25 27 6.9 0.3 1 23 296 318 296 318 0.96

3 12 0.0042 0.46 12.5 1.8 2 23 358 379 357 379 0.97

4 12 2.7e-05 0.0029 19.4 4.8 1 23 387 409 387 409 0.98

5 12 5.3e-06 0.00058 21.6 0.2 1 23 415 437 415 437 0.97

6 12 7e-06 0.00077 21.2 3.3 1 23 443 465 443 465 0.98

7 12 1.6e-07 1.7e-05 26.4 1.0 1 23 471 493 471 493 0.96

8 12 4e-06 0.00044 22.0 0.8 1 23 499 521 499 521 0.99

9 12 6.1e-06 0.00068 21.4 0.2 1 23 527 549 527 549 0.98

10 12 0.0005 0.055 15.4 1.5 1 23 555 577 555 577 0.99

11 12 1.2e-06 0.00014 23.6 1.5 1 23 583 605 583 605 0.99

12 12 6.5e-07 7.1e-05 24.5 1.0 1 23 611 633 611 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.15	17	7.6	2.4	1	20	191	210	191	212	0.82
2	12	0.25	27	6.9	0.3	1	23	296	318	296	318	0.96
3	12	0.0042	0.46	12.5	1.8	2	23	358	379	357	379	0.97
4	12	2.7e-05	0.0029	19.4	4.8	1	23	387	409	387	409	0.98
5	12	5.3e-06	0.00058	21.6	0.2	1	23	415	437	415	437	0.97
6	12	7e-06	0.00077	21.2	3.3	1	23	443	465	443	465	0.98
7	12	1.6e-07	1.7e-05	26.4	1.0	1	23	471	493	471	493	0.96
8	12	4e-06	0.00044	22.0	0.8	1	23	499	521	499	521	0.99
9	12	6.1e-06	0.00068	21.4	0.2	1	23	527	549	527	549	0.98
10	12	0.0005	0.055	15.4	1.5	1	23	555	577	555	577	0.99
11	12	1.2e-06	0.00014	23.6	1.5	1	23	583	605	583	605	0.99
12	12	6.5e-07	7.1e-05	24.5	1.0	1	23	611	633	611	633	0.98

Sequence Information

Coding Sequence: ATGGAGGTACATCATATAAACATAGCTCCCTCAGCACCTCCTGAGGTGTGCCGGGCGTGCATGAGCAAAGAAAATGATTTGAAGCCTTTATTTTTAGATTACAAAGACTCACTTCCAACATTGCCTGATATTTTATTACAAGTTACCGGATTAAATGTAATGGAAAATGACGGCCTCCCCAATCATATTTGCACCACGTGCATATCTTTAGCACAAAGTGCTCTGCACTTCAAAGAAATGTGCTATCATTCTGACATGAACTTCAGAAAAGGATTTAGTGGTGAACCTGTCATTCTTAAACCTTACATTAAAAAAGAATGTGAATCTTTTCTTAGTTCAGAAGTAAATTTAATGAACTTTGAGAAAAATGACAAAGAAAATGTTGAACATATTTTTGAAGTGCCTGATGATAAATATGTGGACTCTACTAAGAACAGTGCAGCCACCGTAGCACCTTACCAGTGTGGTTTGTGTTGTAATAGCTTCCAGTTATGTAGTAAATTAAAAGAACATGTTAAAGCTTTTCATGGAAATCATTTTAATATAAATAAATTAGGTGACAACTCTAAGTATTCATGTTCAATATGTTCAAAAGGATTTAGATCGAAAAAAGGGCATTCTTCACATTATAAAAGATGTCAAAATCGTAATGAAAAGAATGTGAAAGTAAAAAAAGAAGCAGCCAGTGATAGTGACAGTGACACCCCTTTGTCTGAGAAGATTCAGTCACATGCCACCCTGGACTCCTTACCTGGACTCGACCTGGAGATAGAATCGCATAGACAAGATGATTATTATGATGCTGATGATACAGAAGTACCATTTGACTTTGGTGAAGTTAAAATTGAAATAAATGAAGAAGAGAAGTATACAGAAGAAAAAAAGTATTCTTGTGAGGAATGTAATCTTACATTAACAAAAACCATGTACGATGCTCACGTAAAAACTGTTCACCCTGAAAAGAAAAAAGTATCTCGTAAACGTAAAATTATTACATTCAACGGAGATATTCAGGATGCAGGAAGTCTTGAAAATAATAAGGTAGATTCTATCCCTCCTGTGCCGTTGCTGAAGTGCACACAGTGTGAGAGAAAGTTTTTGAAAGAATCATCTCTGAATGCACATTTAAAGAAGCATGAGAAAGAACTGAATGAAGTACATAAATGTGGCACTTGCAGTAGGGAATTCAAAAGAAGAGCTCATTTAGAAAACCATATGTTAACTCATTCCATAGACAAAGGCTTTAAATGTAGTTTGTGTCCTAAATCATTTACTGTGCAAGAAAGTCTAAATATCCACATAGCAAATCATAAAGGAGCAAAGAAACATCAATGTCCACActgtgaaaagggcttcaatatgttgtccactttaaaggatcacatcagaacacatacgggtgagaagcctttcctttgttccatttgcgggagagggttcagtcagagcaccaatcttaaggagcacatgcgtaggcatcaaggatacaaaccattcaagtgtgacttttgcagtcaaacctttgtgtccaagggagaattagaggctcatttaagaaaacatagtggagcacatccctttgtatgtgacgaatgtggcggaggctttaccacctcgagttccctggtaaagcataaaaggatccacagtggggagcgtccttataaatgtgacttctgcccaatgagattcacagccctggggaccatgaagaatcacaggaggactcatacaggggagaaaccatacaagtgccagtattgcgagaaggcgtttgtacagaaaaatgatctggtcactcatacccgcactcacactggagaacgaccttacgtctgtacagtttgtggacacgcctttagacagagttctgcccttaaaacacacttaaagattcatggggGACATACTGATCTGGTGGCTGTAGCTGTGGCTGCTCCTTTACAGGATAGGTCTGCAATCGAAGAAAGCTCCTCTTCCATCAACACCATGACGCCAAAAAGTGAAAACAGTAATCTTTAA
Protein Sequence: MEVHHINIAPSAPPEVCRACMSKENDLKPLFLDYKDSLPTLPDILLQVTGLNVMENDGLPNHICTTCISLAQSALHFKEMCYHSDMNFRKGFSGEPVILKPYIKKECESFLSSEVNLMNFEKNDKENVEHIFEVPDDKYVDSTKNSAATVAPYQCGLCCNSFQLCSKLKEHVKAFHGNHFNINKLGDNSKYSCSICSKGFRSKKGHSSHYKRCQNRNEKNVKVKKEAASDSDSDTPLSEKIQSHATLDSLPGLDLEIESHRQDDYYDADDTEVPFDFGEVKIEINEEEKYTEEKKYSCEECNLTLTKTMYDAHVKTVHPEKKKVSRKRKIITFNGDIQDAGSLENNKVDSIPPVPLLKCTQCERKFLKESSLNAHLKKHEKELNEVHKCGTCSREFKRRAHLENHMLTHSIDKGFKCSLCPKSFTVQESLNIHIANHKGAKKHQCPHCEKGFNMLSTLKDHIRTHTGEKPFLCSICGRGFSQSTNLKEHMRRHQGYKPFKCDFCSQTFVSKGELEAHLRKHSGAHPFVCDECGGGFTTSSSLVKHKRIHSGERPYKCDFCPMRFTALGTMKNHRRTHTGEKPYKCQYCEKAFVQKNDLVTHTRTHTGERPYVCTVCGHAFRQSSALKTHLKIHGGHTDLVAVAVAAPLQDRSAIEESSSSINTMTPKSENSNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -