Acin026018.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- -
- Assembly
- GCA_947579605.1
- Location
- OX388322.1:1933714-1949271[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 39 0.017 1.8 10.6 1.1 2 23 53 75 52 75 0.95 2 39 0.0002 0.022 16.6 2.8 1 23 85 108 85 108 0.93 3 39 0.016 1.7 10.7 0.5 1 23 130 153 130 153 0.93 4 39 0.018 1.9 10.5 0.1 1 23 161 184 161 184 0.97 5 39 0.0056 0.61 12.1 1.0 3 23 388 410 386 410 0.89 6 39 0.0089 0.98 11.4 0.1 3 23 443 464 441 464 0.95 7 39 0.11 12 8.0 1.6 2 23 508 530 508 530 0.94 8 39 0.021 2.4 10.2 1.6 2 23 677 699 676 699 0.96 9 39 0.0023 0.25 13.3 0.8 1 23 708 730 708 731 0.94 10 39 7.6 8.3e+02 2.2 3.3 3 23 766 787 766 787 0.98 11 39 0.00099 0.11 14.4 1.0 1 23 796 819 796 819 0.97 12 39 0.045 5 9.2 1.4 3 23 849 870 849 870 0.98 13 39 0.014 1.5 10.8 8.0 1 23 879 902 879 902 0.97 14 39 0.012 1.3 11.1 0.5 3 23 941 962 940 962 0.98 15 39 0.017 1.9 10.5 1.8 1 23 971 994 971 994 0.96 16 39 0.037 4.1 9.5 1.2 2 23 1029 1051 1028 1051 0.96 17 39 1.4 1.6e+02 4.5 1.2 1 23 1060 1083 1060 1083 0.93 18 39 0.18 20 7.3 1.4 2 23 1119 1141 1118 1141 0.95 19 39 7.4 8.1e+02 2.2 2.8 1 23 1150 1173 1150 1173 0.90 20 39 3.3 3.6e+02 3.3 0.4 3 23 1277 1298 1277 1298 0.95 21 39 0.00012 0.013 17.3 0.5 1 23 1307 1330 1307 1330 0.98 22 39 0.00037 0.04 15.8 0.2 1 23 1401 1424 1401 1424 0.98 23 39 0.0038 0.42 12.6 0.5 2 23 1443 1465 1442 1465 0.92 24 39 0.033 3.6 9.6 0.1 1 22 1474 1495 1474 1497 0.91 25 39 0.22 24 7.1 1.0 2 23 1559 1581 1558 1581 0.95 26 39 0.19 21 7.2 0.6 3 23 1603 1624 1602 1624 0.94 27 39 0.28 31 6.7 0.3 2 20 1668 1686 1667 1688 0.92 28 39 0.092 10 8.2 0.9 1 23 1700 1723 1700 1723 0.91 29 39 0.00071 0.078 14.9 1.0 1 23 1784 1807 1784 1807 0.95 30 39 0.048 5.2 9.1 0.0 1 23 1839 1862 1839 1862 0.93 31 39 3.3e-05 0.0036 19.1 1.0 2 23 1874 1896 1874 1896 0.96 32 39 0.043 4.7 9.3 0.2 2 23 1911 1933 1910 1933 0.95 33 39 0.18 20 7.3 0.8 1 23 1965 1988 1965 1988 0.94 34 39 0.045 5 9.2 0.9 2 23 1996 2018 1995 2018 0.95 35 39 0.0018 0.19 13.6 3.0 3 23 2031 2051 2029 2051 0.96 36 39 0.14 15 7.7 4.1 1 23 2084 2108 2084 2108 0.97 37 39 0.4 44 6.2 0.6 2 23 2116 2137 2115 2137 0.96 38 39 0.49 53 6.0 6.2 1 23 2144 2166 2144 2166 0.95 39 39 0.36 40 6.4 4.5 2 23 2171 2193 2170 2193 0.96
Sequence Information
- Coding Sequence
- ATGAGTGAGATAGAACATAAAGGAAAACAGGAGAAAGATATAAAACAAACAAATAAAAGTAATAAGATAAAAATAAGTACACAACAAAAGAACAATGAATTAGAATTATTTTTGAAATCATTTGGGTCTAGAAATAATGATGATGAAAACAAATGGACGTGTAACAAATGTGGTTTAAAATTTATTCGTTCTACTTCAGCATTACATCATTTAGAAAGAGTTCACAGTATTCAATATGAAACACTTTGCAGATATAATTGTGAACATTGTGATTTGGTTTTTACGAATAAAGATTCGTTAAAACAGCATTTCTACAGAGTACACAAGCAAAATGATGTTGATATCTATGAGAACGCTCCACAGTATACTTACGATGAAAATAGAAACTATATTTGTAACGTTTGTGAAGTAAAATTTAAGAAAAGAGCTACTCTATTATCACATTTAAGTGATAGACATGGTATTGTAATAGAATATTTGTATGTATGTGGAATATGTCAACGAAATATTACGTCTAGAGCTGGATTAATAGCACACGTGAAAAGTAAACATGGAGATATTAAGCATGATAGATCTGATACTGTAAATGTTCAAAAGAATGTTTCGTTAGACGCACGTGATTGGCAAACAGCTCCGGTTAAAGTTACAGTAGTTTGCTTTCCAAAAGGTGTTACAGCAAAAAATTACTCGACTAATAGTGATGTTATTTTGAAAATTGAAGAAAATGAAAAAACAGATGTTTATCATAATACTGACGTCACTCATTTTGACGGTGATGATGAAGCTTGCGATAATGTTTTGCCGACAGAAAACGATCAAGACTATGATAAAAATGATGAAATTAATGAGATGAAAAATAAAAGCCTATTTAAAAAAAGAACTGAATTAAATTTGAAAGAAGAGCCTGAATTAAATTTTGATACTAATGTAGAAAAGAAAAGTTTCAAGTCCAAAAGATCCTATGAAAGTTTTTTAAATCAGGAGCAACAAGAAGAAATGAGACAATGTGCCGCATGTGGTAACATTCTTTCCAGCGGTGATAAATTACTTTTACATATCAAAAATGTTCATTCAGTGGAATATGCAAGAATCAAGGAAGAATTCAGTAATTTTGGGTCTACAAGTAGCGATTCCGAAGAAGACAATGACGATCTATTAGACTGTGATATTTGTAATAAAAAATTTAGTAACTTAAAACAATATAGCTTACATGTGAAATCATCAAATCATAGGCAAAATTTATCCCCAAGTTGTTCGATATTGTCTGATGGTGATTCTTTTGTCGATGAAGATTGCTTTAATTTGAATAGTGAAAAAATTATTATCTGTGATATTTGTGCTTTAACATTTGAGACTAGTGATGAATTAGAATCTCATAAAAATATTTTTCATTCTAATAGTACTTTAACTATAGAAAATGTAAAACAAGAAAAATTAGTTTTAGGAAATGAAGTTAGTGGGAAAGTATTAGCAACAAATTCCGGTTGTGATAAACCTGTAAGTATTGATGTAATAAAACGAAGATGCCATTTATGTAAAATTATTTTTGATACAAAGGAACTTTTATCTCTTCACAAGGAAGTCAAACATTGCACAGAACGTAAAGTATTGAACGAAGCTAAGAATATTGAGTGTTTAGTTTGTCCCATGGATATCGAAAGTGCTGATGGTGCTAGCGGCGTACTGAACCTGCTACAAGATCCTCTACTTGATGTTAAATTAATAGATGCCAACAATATTAAGTTAGAAGTATTGGACGAGGATGAGGCTGAATTGCTTGTGGACGAAGAAGTGGCCGAGTCGAGTAAATCTTACAAAACAAAATCAAAAAAGATTAAAAAGGAGAGCAAAAGTAAAAGTAAGGTTAAAAAGAAATCAAAATCAAAGACAAAAACAAAAACGAAGACGAAGAATGGAAATAGTACTACTAGTAGTAATAAATTTAAACAGAAGCAAGAGATGTCCACTAAAGAAGTAGAACAAATGATCAGGGAGAGCGAAGGAACTCAGGATGCTAATGGAGTTTGGAGTTGCAAAAGATGCCCAAGGATCTACAGCAAAGGTTCATCATTTATCCACCATCTTCGTAGAGCACATAAAATCGAGTCGGATATCTTTCAACATCAGTGTAACGATTGTGGGATGGATTTTATCAGTGTTGCCGGACTCAGACGTCATGCGAGTCTTCATCATCCTTCCTCGGCGAAAGCTATAGGAAAGCTTAAGAAAGAACAAGAGGAAGAAGAATTCCTGCTTAAGGATTATGGTAAAAAAGATGAGGAGGGTTTCTGGTGGTGTACCAAGTGTGGGACGAGATGCGTTGCTAGAGTAAAGTTTATCTATCATTTGAAAAGGTTTCATAACATTAACATCGGAGGATTTGATTACAACTGTCCTCATTGTAAACTGGAATTTAGGAATTCAAAGGCCGTCACCGTGCATATTCTCAGACTACATCCTGATCTTGCTCCACAGCAGACAAGCTACATGCCACAAAAAATGATGAACGAGAATGGTTATCAAGACGAGGACGGAGTGTGGTGGTGTGACAAATGTGGGTTGCGCTACACCAAACAGAATCTCTTTGTCATCCATCTGAAGAAGTTCCATCAGGTTGGGGCTCCCATGTTGATACATCAGTGTGACCATTGCCATTTCCAATTTACACGGAGGGACGTGCTTCAGAGGCACGTTAAGAAGATGCACCCAGAAAAGTATGTCGCTAGTTCTGAGGAGTCCAGTGAATCTTCAAATTTATTAGTGGAAGAGTTGAACAAATTGCAGGAGCACGGAAAGAAAGACAAACACGGCACTTGGCTGTGCAACAATTGCAGCGCTATGTACGGGAGAAAGTCGGCCTTTATTAAACACTTGAAAACCGTGCACAAAGTGGACGTTACAGACAACAAGTTCAATTGTCCGACTTGTGATGAATTTTTCCTTACACAGAGGGCACTTAATGATCATATGAATCATAGACATCTCTCTACTGATGCAGATACCAGCGATTGCACAGAGTCGTCCAAAAAAGAAGATTACGAAAAGCTATTGCAGCACGGCAAGAAACTGGATGACGGTCTCTGGGAGTGCAACGAGTGCAGTTCTACCTTCACGAGGCAGGTCCGCTTCATCTATCACCTCAAGAGACAACACAATATCGCCGTAAAGGATTTCAACTATCCCTGCGTGCAGTGCAATCTGAGTTTCTTGTCTCTGAAGGCTTTGCGTGCGCACAACAATAATTGTCACGTGGAAGATGGTTTCATGGGATCTCAGGCGAGCAGTACAGCTACCGTATCTACTCGAGACCTGGAAAAGATCAGAACTGAAGGTACCAAGTGCGAGGATGGCTGGGAGTGTAATCGCTGCGGTACAAAGTTCTTCCGAGACAGCGTATTCATGTACCACCTTAAGAGATATCACGGAGTAGAGATGGGAAGCTTCCAGCACAAATGTCCACATTGCTCATTGGATTTCATGGCTTTCACGGGACTTCGATACCACGTTCTCAACAAGCATCCTAAACAATACGATAACTTTCTTTCTAAACTATCACCACCCATAAGGGCCGAGTTAGAAAACGCATCAGACAAACCTATCAAacgaaaagttggtgcagatgacgacgatgatgatagtgatgatgacgacgtaacattgGCCTCATTGAAAGGGAGCGGTCCTAGTACATCGGGGAGACCCGCGGGACGACCGAAGCGGAGCAGGGCTGAAATGGACAAAGAACGAGAAGCGAGAGAGAAACAACAGAATTTAGAACGGGAGGTCATGGAGAAAGAGGGGAAAAAAGATTTAGAAGGCTCTTGGTGGTGTAATCAGTGCGGTCTGAGGTACTCCAAAGATGGAGTCTTCCTTTACCATTTAAAGCGTGCCCACAATATCGATATTGGAAGTTTTGAATTCAAATGCTCATACTGTCAAGTTGAATTCATCAGCAAAGCCGCTTTGAGGACACATATCAACAGATTACACCCGGAAGTTAATGAAAACTTGCTTAGGAATTCATCAGACCTGTTGCAAGCCAGCATTCTCGAGAGTCAAAACCGGATCTTGGAAGCCAACTGCAAAAGAGACACTAACAATCGTTTGGTCTGTAAGATGTGCGGATCCAAATTCATCAAGGACTCCATGTGCTTATATCATTTGAAACGTGATCACGGAATACTCGTGCAAGGCTTCGATTACAAGTGTAACTTGTGCGATATGGACTACAGCAATCCTCAAGCATTGAGAATCCACGTCAAACGTGTGCACGGGGTCGACGAAGATAAAATATTAGACAAGTGCATCTTTAAAAACGATAAATGGGAGTGTAAGGATTGTAATAAAGTTTTCGCTAAGCGAGCTAGTTTTGCGTATCACTACGGCAAGTATCACGAAACTGAAGATGCTAGATTCAAATACCAATGTAAGATTTGTCAATCAAAATATATTTCGCCGAAAGGTTTACGACTGCATTTAGTTGCAATTCATGGAGAAATGGATAATACGGGGGATAACGTACAAGTTATCAAACAAGAGTACAAACCGCAAGTTAGTGGTGTTAAATTGAATATATCTGTGAATAAAAATAAACCTAAAACCGAGTTTGTAGATCTTAAAAAAGATTTACAACTAACTGGTGATATAATCGGTGTCAATCAAGACGGTATTCAACAATGTCAAGCTTGCGGTTATTTATTATCGAGCAGAAAGAATTTGATGGAACATATTCATAAAGTACACCCAATTGAATATGATGCGATACAGACAATATTAGACGCTTCCGAATTAGAAGAAGAATCATTCTGCAAAGTTTGCGGTCATATTTTCTTTAGCGTCATTGAATTTGAAAGACACGTTAAGGCAGAACATAAACGTGAAGAATGCGTTGGTAAATTGTTTGAATGTAAACTGTGTGTATTCTTTACAATGTCTCAGTATATATTTAGAATGCATTTGAAGACCATACACGGTATGTATGATGAAAACACTCCTCAATGGCCTTGCAGAAAATGCGGTACGTTATTTGACTCCAGGCAACATTTACTCGAACATGTCACTAGAAGTTCTTGTTATATTGGTAAGTTACTCGCGGATTTTGAATGCACTGAGTGTCTATTATGTTTCCGTACAATGAGTGATATAGCCAAACACGTTGAGGATAATCATATGAGTATAATAGTTAAACCTAACAGCATTGATTTAAGTAATTACGCCAATTCTAATAACCTCTCAACTCAATGTACACAGTGTCCTTACTGTCGTGTAAATATACCGTATTCAGAACTGTATCCTCATTTAACTAAATATCATTCTACGGCAGAAAGAGAAACAGCAGCTAATAAACATCACGAATGTCTCATTTGTAAGAAAAACTTCTCAGAATTGTCCCTACTCAAGAGTCATATTCAAGAAGAACATAAATATCGAGACGATAATTCATTGATTCTCAGTGAATATGCGGCATCGATGAAAGAAAGAACCGATAGAAGAGATTCAGAAGATTTCAACGAATTCAAATGTGTACAATGTGGTCTTGTTTTACCTGATAATGCAGCTTTATTAGCACACATTGCCGGTGAACACGGCATTAAAAAATATTCACAAACTAATAACCCGACGTGTTCATTATGTAATCAGAAGTTTATCAATAATTCTTCTCTCAGGAGGCATATTAAAGTGATTCACGTTTCTAAAAGTAAGATGTCGAGTACGGAACGTAAACCTTCAGTGTGCGTTGTATGTTCTGAAACATTCCGCTCGTACGTCGCAATGATTAAACATTTCAGAAGTGATCATATAGACGATCCTTACGTGAGTGGTAATGATTGTTACGATGTTGTAGCTCGTGGCGGTGTTTTAAAACCTGGTTCTAAAAAGAGTATGTTAATATTTAAATGTAAACTTTGTTCGTACGCGACAAAGAGGCAATATGGTATGGACATTCATCTCATCAACCAACATTGGAATGGCGTTAAGCCTGTGTCATGTTCGTATTGTGATTTTAAAACTGCAACGTTTAAAGAATTAGAGAAACACACATACACAGAACATCCAGAATCGAAACAAGCGAAAGAAACTGTTTGCTTATGTGACGAATGTGGCAAAACTTTTAATAATAAAGTAACATTCTATCAACATAGAGAATCGCATCTGCCTCCTAAATACAAGTGTGATTTTTGTAATTATACTACACACTTAAGAACGTCAATCGATAATCATAAACGAGTTCACACTCAAGAAAAACCTTTTCAATGTACAATTGAAGGATGTAATTATTCTTGTTCGAGTCATACTGGGTTAAAAGTACACAGGTTTTCGCATTTCCCCGAAAAGTATATGCAAACTTGCGATACGTGCGGATTTAGAACAGTTAATAAATATATAATGAACGCTCATATGAAAGAACATAAAAAAGGTATTGTTAATTTCTCTTGCGAGCATTGTTCTTACACATCGAATGATAAATCGCAGTTGTCTGTTCATTGTAAACGTCATATGGCGGCGAAGTCTTGTCAATTATGTGATTTTACAACGAAATATAAGCAAACTATGAAAAAACATTTGAAGAAACGACACGGGGTTGTTGTGACAAAGGAAGACAATGTCAAATGGTTTTAA
- Protein Sequence
- MSEIEHKGKQEKDIKQTNKSNKIKISTQQKNNELELFLKSFGSRNNDDENKWTCNKCGLKFIRSTSALHHLERVHSIQYETLCRYNCEHCDLVFTNKDSLKQHFYRVHKQNDVDIYENAPQYTYDENRNYICNVCEVKFKKRATLLSHLSDRHGIVIEYLYVCGICQRNITSRAGLIAHVKSKHGDIKHDRSDTVNVQKNVSLDARDWQTAPVKVTVVCFPKGVTAKNYSTNSDVILKIEENEKTDVYHNTDVTHFDGDDEACDNVLPTENDQDYDKNDEINEMKNKSLFKKRTELNLKEEPELNFDTNVEKKSFKSKRSYESFLNQEQQEEMRQCAACGNILSSGDKLLLHIKNVHSVEYARIKEEFSNFGSTSSDSEEDNDDLLDCDICNKKFSNLKQYSLHVKSSNHRQNLSPSCSILSDGDSFVDEDCFNLNSEKIIICDICALTFETSDELESHKNIFHSNSTLTIENVKQEKLVLGNEVSGKVLATNSGCDKPVSIDVIKRRCHLCKIIFDTKELLSLHKEVKHCTERKVLNEAKNIECLVCPMDIESADGASGVLNLLQDPLLDVKLIDANNIKLEVLDEDEAELLVDEEVAESSKSYKTKSKKIKKESKSKSKVKKKSKSKTKTKTKTKNGNSTTSSNKFKQKQEMSTKEVEQMIRESEGTQDANGVWSCKRCPRIYSKGSSFIHHLRRAHKIESDIFQHQCNDCGMDFISVAGLRRHASLHHPSSAKAIGKLKKEQEEEEFLLKDYGKKDEEGFWWCTKCGTRCVARVKFIYHLKRFHNINIGGFDYNCPHCKLEFRNSKAVTVHILRLHPDLAPQQTSYMPQKMMNENGYQDEDGVWWCDKCGLRYTKQNLFVIHLKKFHQVGAPMLIHQCDHCHFQFTRRDVLQRHVKKMHPEKYVASSEESSESSNLLVEELNKLQEHGKKDKHGTWLCNNCSAMYGRKSAFIKHLKTVHKVDVTDNKFNCPTCDEFFLTQRALNDHMNHRHLSTDADTSDCTESSKKEDYEKLLQHGKKLDDGLWECNECSSTFTRQVRFIYHLKRQHNIAVKDFNYPCVQCNLSFLSLKALRAHNNNCHVEDGFMGSQASSTATVSTRDLEKIRTEGTKCEDGWECNRCGTKFFRDSVFMYHLKRYHGVEMGSFQHKCPHCSLDFMAFTGLRYHVLNKHPKQYDNFLSKLSPPIRAELENASDKPIKRKVGADDDDDDSDDDDVTLASLKGSGPSTSGRPAGRPKRSRAEMDKEREAREKQQNLEREVMEKEGKKDLEGSWWCNQCGLRYSKDGVFLYHLKRAHNIDIGSFEFKCSYCQVEFISKAALRTHINRLHPEVNENLLRNSSDLLQASILESQNRILEANCKRDTNNRLVCKMCGSKFIKDSMCLYHLKRDHGILVQGFDYKCNLCDMDYSNPQALRIHVKRVHGVDEDKILDKCIFKNDKWECKDCNKVFAKRASFAYHYGKYHETEDARFKYQCKICQSKYISPKGLRLHLVAIHGEMDNTGDNVQVIKQEYKPQVSGVKLNISVNKNKPKTEFVDLKKDLQLTGDIIGVNQDGIQQCQACGYLLSSRKNLMEHIHKVHPIEYDAIQTILDASELEEESFCKVCGHIFFSVIEFERHVKAEHKREECVGKLFECKLCVFFTMSQYIFRMHLKTIHGMYDENTPQWPCRKCGTLFDSRQHLLEHVTRSSCYIGKLLADFECTECLLCFRTMSDIAKHVEDNHMSIIVKPNSIDLSNYANSNNLSTQCTQCPYCRVNIPYSELYPHLTKYHSTAERETAANKHHECLICKKNFSELSLLKSHIQEEHKYRDDNSLILSEYAASMKERTDRRDSEDFNEFKCVQCGLVLPDNAALLAHIAGEHGIKKYSQTNNPTCSLCNQKFINNSSLRRHIKVIHVSKSKMSSTERKPSVCVVCSETFRSYVAMIKHFRSDHIDDPYVSGNDCYDVVARGGVLKPGSKKSMLIFKCKLCSYATKRQYGMDIHLINQHWNGVKPVSCSYCDFKTATFKELEKHTYTEHPESKQAKETVCLCDECGKTFNNKVTFYQHRESHLPPKYKCDFCNYTTHLRTSIDNHKRVHTQEKPFQCTIEGCNYSCSSHTGLKVHRFSHFPEKYMQTCDTCGFRTVNKYIMNAHMKEHKKGIVNFSCEHCSYTSNDKSQLSVHCKRHMAAKSCQLCDFTTKYKQTMKKHLKKRHGVVVTKEDNVKWF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -