Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388312.1:29661479-29678608[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.04 4.4 9.4 0.3 1 23 167 189 167 189 0.98

2 17 6.6e-05 0.0073 18.1 6.0 1 23 195 217 195 217 0.98

3 17 0.00025 0.027 16.3 7.1 2 23 224 245 223 245 0.97

4 17 1e-07 1.1e-05 27.0 0.7 1 23 253 275 253 275 0.98

5 17 0.00017 0.019 16.8 1.1 1 23 281 303 281 303 0.98

6 17 9.8e-06 0.0011 20.7 1.2 1 23 309 331 309 331 0.98

7 17 8.6e-07 9.5e-05 24.1 4.0 1 23 337 359 337 359 0.98

8 17 0.93 1e+02 5.1 1.1 1 23 365 389 365 389 0.90

9 17 0.0079 0.87 11.6 1.2 2 23 400 421 399 421 0.97

10 17 2.3e-05 0.0025 19.6 3.7 1 23 426 448 426 448 0.99

11 17 0.0025 0.27 13.2 0.5 1 23 697 719 697 719 0.98

12 17 5.9e-05 0.0065 18.3 2.6 2 23 727 748 726 748 0.97

13 17 0.00012 0.013 17.3 3.0 1 23 754 777 754 777 0.96

14 17 6.3e-05 0.0069 18.2 0.4 1 23 945 967 945 967 0.99

15 17 0.02 2.2 10.4 0.6 1 23 977 999 977 999 0.98

16 17 0.18 20 7.3 3.8 1 21 1007 1027 1007 1030 0.93

17 17 7.8e-05 0.0086 17.9 2.5 3 23 1040 1060 1039 1060 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.04	4.4	9.4	0.3	1	23	167	189	167	189	0.98
2	17	6.6e-05	0.0073	18.1	6.0	1	23	195	217	195	217	0.98
3	17	0.00025	0.027	16.3	7.1	2	23	224	245	223	245	0.97
4	17	1e-07	1.1e-05	27.0	0.7	1	23	253	275	253	275	0.98
5	17	0.00017	0.019	16.8	1.1	1	23	281	303	281	303	0.98
6	17	9.8e-06	0.0011	20.7	1.2	1	23	309	331	309	331	0.98
7	17	8.6e-07	9.5e-05	24.1	4.0	1	23	337	359	337	359	0.98
8	17	0.93	1e+02	5.1	1.1	1	23	365	389	365	389	0.90
9	17	0.0079	0.87	11.6	1.2	2	23	400	421	399	421	0.97
10	17	2.3e-05	0.0025	19.6	3.7	1	23	426	448	426	448	0.99
11	17	0.0025	0.27	13.2	0.5	1	23	697	719	697	719	0.98
12	17	5.9e-05	0.0065	18.3	2.6	2	23	727	748	726	748	0.97
13	17	0.00012	0.013	17.3	3.0	1	23	754	777	754	777	0.96
14	17	6.3e-05	0.0069	18.2	0.4	1	23	945	967	945	967	0.99
15	17	0.02	2.2	10.4	0.6	1	23	977	999	977	999	0.98
16	17	0.18	20	7.3	3.8	1	21	1007	1027	1007	1030	0.93
17	17	7.8e-05	0.0086	17.9	2.5	3	23	1040	1060	1039	1060	0.99

Sequence Information

Coding Sequence: ATGGCAAAGGACACATCCGAAACTGTGAATGATATGTGGAATGGTTTCGAGGAAACATGTATTGGTCTTGCAAAAAGATGTTTAGGAGTGTCAAAAGGTCCTATCTCGAACAACAGAGAAACTCACTGGTGGAATGAGGAAGATCTGACAGTGGAAGATGTGACACAGAACCAAATATTGGACACTTTGGAGGATCCCACACTCACCTCTACATCACTCATACCAAATGAACCTTTGGTGGAGTCATTCTATGAAGAGGATCCTGCGGACACAGATAACTTAATTCCATTGGCAATATGCTTACCCCAGTATGGAGACAATTCATTATTTGGGCACGAAGTAGATTTGGAATCTGAGCGCAGTCTGTACATCCTGAGAGATGATGACTTTGTCGACAGCTACTTTGATGTCACCAGCAACTCCTGGACAGACAGCACAGATATACTCTTGGATAAGGACATCATTCCTATTATAGGTGTTTCAGAAGAACAGCAGAGCTTTCCGTGTGAGGAATGTAAGGAGGTACTGACCTGCAGTGAGGACCTCTCTGTACACATGTCCATGCACACACCTGGAGGAGTACATAAGTGTAATGTCTGCGTTAAAGTCTTTCATAGGAAGGAATCTTTAAAGCGTCATATCAAGAGGCACATGAAGGACAAACCCATGAGCTGCCATTTGTGTGAGAAGAAATTCTCAGACAAATGCGATCTCAAGAGACATCTCAAACGCCACGCTGATTGGGTGGAGAAACCGCATGTGTGTACTGAATGTGGCAAAACTTACACTGATGCCCAAAATCTTACCGTGCACATGCGTGTACACTCTGGTCTGAAGCCATATGCCTGCCAGCTGTGTCCATCTACTTTCAGTGACAAGAGACTGCTTAGATCGCACTACAACACTCATTCAGACGAGAAGAAATATCACTGCAACGAGTGTGGAAAGTCATTTAAATCCCCTTCAGTTTTGTCGGAACACTCCAGGATACATACGGGTATTAAACCTCACAAGTGTGATACTTGCGGAAAAGAATTCACTCAGGCATCCAACTTACAACATCACCTCAACTCTCACAGTTCGGAGCGGACGTTTGCATGTCTTCTGTGCAATGATCACATTTACAAGAGGATCTCTTCTCTTAAGGAACACATGGCCAAGTCACATCCAGAGACAGCTGAAGCCACCAGAACGAAAAAGTGCAACGTCTGTAATCAGGAGTTCCAGAAATTCAGTGAATTGGTCGCCCATAGAAATCAGCATAAGACACTTCCATACAAATGTCATGTTTGTGGTAAAGCCTTCCCACAGAAATATagaagGAAAAGGCACATGCTGTCTCACATGAAGAAAGGTGAAATAAAAGAAGTGAACGGTAACTATATTCTGGAAGAGGAAGATTCTGGTGAGAAGCAAAACAATGAGGAGGCCAACCAACAACAATCGATTGAGGCCGAAGATGATGTGCAGAATAATACGACAGAACCAGATGTTGTTACTGTGAAGGTGGATGATGCAAAACCAGTGGAGCAACTGAAGGAACTGAATATAGAGGGGAATGGAGACAGCGGTGTCGAGTATACAGCACTGAGAAATATGGACGGACCAAAGGCTGTTAGAACTCAAGTTACCGATGATGTTGTTTTGGACTTGATTGAGCCAATCACTCGCTCAACATCGCCCTCCGTTACCAGAGAGAATTCAAAAGATGGTACGTTAGCGGGACCAGAAGCGTGCATCTCATGTAGAGTTGCAGTCCGCACGGCAGTATCGAGCGTGAAAGGGGTGTTCATAGAATGTCCTCACACTTTGGAGCCAGAGTGTACTATTGAAGAGAACATCCTGAGTCCTATAGATGAGGCAATATTGAATAAGTCTTATCAGAATGGCAGTACAAACGTGCTGGCCACACCGCAGTACACGGATATCTCACACAGCAGTCAAAGCACCTGGGTACAGCAAGAGACAGGGGAGGTGGTGGTTACCCCAAATCCTGTTATACAGTTTGATGGATTTTCTGAGGATGCGTTGCCTGTTATACAACTTACAGATATTCATGCAAATGGGCTGAAGGACAAAGATGGCAACTACGAGTGCAAAATATGCAAAATCAAAGTTACAAAGTACAAAGATCTCTGGATCCACATGTCCCTGCACCCCATCAACACGTCCACGTGGGAGTGCAACTACTGCCGGAAACGTTTCTCTAAGAAGACCTTCCTCAGCCGCCACATCAAGATTCACATGACTCGTGAGATGTATCCCTGCGCTCACTGTGATAAAAAGTTCTATGAGAAGAGCAAACTTAGAAAACATGTCATCAAGTCTCATCCAGAAGTCAGTGAAACACCACCAGCAAGTAGCGAAGAGGAAAAATCCCAAACATCAATAATAGACAATACACAAATCTCTAACAACCTACCTCAAACACCAACAAGTTATACACAATTGTCATTAGACAACAGTTGTAGATCAATAATACCTTTAAAACAGACACAAGTCTCTTTAGATTTATCACCAAATCAATCTCAGACATCTTTATTGAATATGTCACCAATGTCATTAGAACCGATAAGGAGTTCAATAGATATTTCACAGACAAATAATTTAGAGATGAGATTTAATAATGACAATATTAGAATGTTGAATTTAAATTCACAACAAATTGTTAACTGTACTCCAACTAGAATAATGAGCCACGGACCTCAGTTGATTGTTAATCCTGTACAGTCTATATCAACATTTACTTCACCTCTTACTACAGTAGACCTGACACAATCAGTAGAAGACCCACAACAAAGATTGGAGAATTCTCAGGATTCAGAAATGGAATACAGCTGTGATGTGTGTGGGAAAAAATATGGCAAGGCTATCAAACTGTCTCTACACATGAGAACTCACAACCAGAGCCAAGAGTCGGAGACATCCTACACGTGTCAGGTGTGTCAGCAGACATTCCTCAACATGTCGGCACTGGTGCAGCACTCACAGACACATATAGATACCAATACATTCACACATTCTTGCGACGCCTGTCAACAACAGTTCACCACATTGTCAGACTTGAATTCCCATAAGAAATGTGTTCATAGCACTCCTAGTAAGCCAGTGCCATTGTGTAAGATATGCGGGAAGTCCTTTACTAGTATGTACAAAAGGAGAAAACACATGCAGATGCACAAACTGGAAGCGGAAAATAGCAATAATACTACAAATTCTGAAGTAGTGGTCAGTTAA
Protein Sequence: MAKDTSETVNDMWNGFEETCIGLAKRCLGVSKGPISNNRETHWWNEEDLTVEDVTQNQILDTLEDPTLTSTSLIPNEPLVESFYEEDPADTDNLIPLAICLPQYGDNSLFGHEVDLESERSLYILRDDDFVDSYFDVTSNSWTDSTDILLDKDIIPIIGVSEEQQSFPCEECKEVLTCSEDLSVHMSMHTPGGVHKCNVCVKVFHRKESLKRHIKRHMKDKPMSCHLCEKKFSDKCDLKRHLKRHADWVEKPHVCTECGKTYTDAQNLTVHMRVHSGLKPYACQLCPSTFSDKRLLRSHYNTHSDEKKYHCNECGKSFKSPSVLSEHSRIHTGIKPHKCDTCGKEFTQASNLQHHLNSHSSERTFACLLCNDHIYKRISSLKEHMAKSHPETAEATRTKKCNVCNQEFQKFSELVAHRNQHKTLPYKCHVCGKAFPQKYRRKRHMLSHMKKGEIKEVNGNYILEEEDSGEKQNNEEANQQQSIEAEDDVQNNTTEPDVVTVKVDDAKPVEQLKELNIEGNGDSGVEYTALRNMDGPKAVRTQVTDDVVLDLIEPITRSTSPSVTRENSKDGTLAGPEACISCRVAVRTAVSSVKGVFIECPHTLEPECTIEENILSPIDEAILNKSYQNGSTNVLATPQYTDISHSSQSTWVQQETGEVVVTPNPVIQFDGFSEDALPVIQLTDIHANGLKDKDGNYECKICKIKVTKYKDLWIHMSLHPINTSTWECNYCRKRFSKKTFLSRHIKIHMTREMYPCAHCDKKFYEKSKLRKHVIKSHPEVSETPPASSEEEKSQTSIIDNTQISNNLPQTPTSYTQLSLDNSCRSIIPLKQTQVSLDLSPNQSQTSLLNMSPMSLEPIRSSIDISQTNNLEMRFNNDNIRMLNLNSQQIVNCTPTRIMSHGPQLIVNPVQSISTFTSPLTTVDLTQSVEDPQQRLENSQDSEMEYSCDVCGKKYGKAIKLSLHMRTHNQSQESETSYTCQVCQQTFLNMSALVQHSQTHIDTNTFTHSCDACQQQFTTLSDLNSHKKCVHSTPSKPVPLCKICGKSFTSMYKRRKHMQMHKLEAENSNNTTNSEVVVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -