Basic Information

Insect: Athripsodes cinereus
Gene Symbol: CysRS
Assembly: GCA_947579605.1
Location: OX388310.1:14200337-14213803[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.4e-07 0.00013 23.1 0.0 1 42 258 300 258 301 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.4e-07	0.00013	23.1	0.0	1	42	258	300	258	301	0.92

Sequence Information

Coding Sequence: ATGACATCAGCGGTGGAAGCACTCAAGGAAGCTGTTCAGTCTAATGTTGATGGTAAAATTAAGGGAGGTAAAATGAACTTTTTGAATACAGCCAGGGACCCGTTATCACAGTGGCTGGATAAAAAGAAAGGCTCTACAGTCAAGGATAACCATATTTTTACCTCTCTACCAAGATATTGGGAAAATGAGTTTCAGAAAGATATGAAATCGCTCAATGTTCTCCCTCCAGATGTATTGACACGAGTAAGTGAGTTTATCCCTCAAATCATAAAATTCATAGAGAAAATAATAAATAATGGTCTGGGATATGAAGCTAATGGTTCTGTTTACTTCAGTGTCAATGAGTTTGATAAGAAGGAGAAACATCATTATGCTAAACTTGTTCCTGAGGCTTATGGAGATACGGCATCTTTACAGGAAGGAGAAGGTGATCTGTCAGAAGAAACGGGTGAGAAACGTTCCCCGAACGATTTTGCACTTTGGAAGAAGTCAAAGAGTGGTGAGCCGGCATGGGAAAGTCCCTGGGGCATGGGCCGCCCTGGCTGGCATATAGAGTGCTCTGCTATGGCCTCTGAGATCTGTGGCAATTCCTTGGATATACACACTGGAGGAGTGGATCTCAAGTTCCCTCATCATGACAATGAAATTGCACAAAGTGAAGTAAGTATCCCTGTCAAATATATACAAATTGATAAAACTGCTATTTGGAGACTCTTGACTCTAATGCCTAGGAAGTATGTGAGAAAAGGAAATTCTGGCAGAGGGGAATGGTCAGAAGACAACTTAAGATGTGCGGTAGAACTAGTGACCTCGGGAAAAATTTCGAAACGAGAGGCCGAACGTCTATACAAAGTCCCAGCTAGAACCATTTCAAGGCGAATATTGTCAGGAAAAATCATGAAACCTTGTCTTGGACCACAAGCATCTCTTGGTGTGGAAAATGAAAGACGACTTGCGCAATACATTAAACGACTTGGTGCTGCTGGATTTGCACCAAATAGAGAAACAGTTCGATCACTGGCCTATGATTTTGCAGAAAATCTGGGAATATCACATCGGTTTTCGAAGGAAAACAAAAAAGCTGGCTATCATTGGTTGACTTCGTTTTTGGAACGTAATAAAGATATTTCCATCAGGCAAGCTGAGGGACTTTCTGTGGCGAGGGCACAGGGAATGAACAGAAAGGAGGCCCTACAACCATTAGATAGAAGTTTTTTTAGGTCCCTCAAAATATATTTCAACGCAGAAGCCAATTCTTGGATGTTAAGAAATAAGTCCAGAACATTAACTAGATATCAAGTTGGTGATCTGATAGGTCGAGCATGGGGAAAGGCTGCCACAAACGGTAATGCTTTGTCTGGTTTTACAGCCTGTGGAATTTATCCACTAAACCCCAATGCCATTCCTGATCATTTTTTTACAATATCGGAAAATACAGATATTGAGCCAATAGCATCAACACCGTCCACTCAATTAATAGCACCAGCACCGTCCACTCAGTCAACACCAACACAATCAGAGCCATTGTTATCTGACTTGCCTACAACTTCTACAACATCCCAAAAAGAAACACCCACCAAAGTTCTGGAAGCAATAAGTCCAATACCAAAAATACCAATTTCAAAAGTCAAAAGAAAACAGGCATACTTTGATAGTCCTAACTGGGTGAACTACTTCCTCCACACTGGCCATCTGACCATAGCAGGATGCAAGATGTCTAAATCCCTGAAGAACTTCATCACCATCCAAGATGCTTTGCAGAAGAATACAGCCACACAGCTGCGCTTTGCCTTCTTGCTACATTCCTGGAAGGACACTTTAGACTATTCACCTAATACAATGGAAATGGCTGTTCAGTATGAGAAAATGCTTAATGAATTCTTCCTCAGTGTAAAGGATGCCATACGTTGTGGTACAGGCGCTGGACAGGGAGGATATTGGTTGGAAGCAGATGCTCAGCTTTATGCTAAATTGAAAATTACCAAAGATTTAGTACACAAGGCCTTGTGTGATAATGTTGACACCCGCTCCACACTAGACTGTATTAGGGATCTGGTATCTGCTACTAATATTTATTTGAAGTCAAAGAACGGAACTCCTAACACTCCCCAAGCACCTAATGCTCCTCTCCTGGAGAAAGTTGGATTATATGTGACTGACTTGCTTCACATATTTGGTGCTATTCCAGGACCTAAAGGAGGCATTGGATTTCCAATTGGATCTGGTGATACTGGCAATTTTGAAGCTATGGTGATGCCATACTTGGAAGCCACAGCCTCCTTCAGACAAAATGTGAGAGATGCAGCCAGATCATTAAAGGCTACTGAAATTCTTTCCTTGTGTGATGCTTTGAGAGATGATATCTTGCCTAATCTTGGTGTTAGATTAGAAGATAAAGAAGATCGCAGTGTAGTGAAGTTAGTATGCCGCGAACAATTAATGAAAGAGAGGGAAGAAAAGAAGAGATTAGAAACTGAGAAAGCAGCTGAGAAGGAGAGAAAGAAACAAGAACAATTAGCTCAGCAACAAGCTAAAGATGAACAAAGGAAAATACCCCCAACAGAAATGTTCAAAAAAGAGATGGACAAGTATTCTCAGTTTGATGAAAAGGGTCTCCCCACACACGATAATTTGGGTCAAGAATTGAGCAAAGGACTAATCAAAAAGTTACAGAAGCTTCAAATTGCTCAAGAGAAAAAATATAATGAATATTTGACCTCTGCAAGTGAACAGTAA
Protein Sequence: MTSAVEALKEAVQSNVDGKIKGGKMNFLNTARDPLSQWLDKKKGSTVKDNHIFTSLPRYWENEFQKDMKSLNVLPPDVLTRVSEFIPQIIKFIEKIINNGLGYEANGSVYFSVNEFDKKEKHHYAKLVPEAYGDTASLQEGEGDLSEETGEKRSPNDFALWKKSKSGEPAWESPWGMGRPGWHIECSAMASEICGNSLDIHTGGVDLKFPHHDNEIAQSEVSIPVKYIQIDKTAIWRLLTLMPRKYVRKGNSGRGEWSEDNLRCAVELVTSGKISKREAERLYKVPARTISRRILSGKIMKPCLGPQASLGVENERRLAQYIKRLGAAGFAPNRETVRSLAYDFAENLGISHRFSKENKKAGYHWLTSFLERNKDISIRQAEGLSVARAQGMNRKEALQPLDRSFFRSLKIYFNAEANSWMLRNKSRTLTRYQVGDLIGRAWGKAATNGNALSGFTACGIYPLNPNAIPDHFFTISENTDIEPIASTPSTQLIAPAPSTQSTPTQSEPLLSDLPTTSTTSQKETPTKVLEAISPIPKIPISKVKRKQAYFDSPNWVNYFLHTGHLTIAGCKMSKSLKNFITIQDALQKNTATQLRFAFLLHSWKDTLDYSPNTMEMAVQYEKMLNEFFLSVKDAIRCGTGAGQGGYWLEADAQLYAKLKITKDLVHKALCDNVDTRSTLDCIRDLVSATNIYLKSKNGTPNTPQAPNAPLLEKVGLYVTDLLHIFGAIPGPKGGIGFPIGSGDTGNFEAMVMPYLEATASFRQNVRDAARSLKATEILSLCDALRDDILPNLGVRLEDKEDRSVVKLVCREQLMKEREEKKRLETEKAAEKERKKQEQLAQQQAKDEQRKIPPTEMFKKEMDKYSQFDEKGLPTHDNLGQELSKGLIKKLQKLQIAQEKKYNEYLTSASEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -