Basic Information

Insect: Athripsodes cinereus
Gene Symbol: -
Assembly: GCA_947579605.1
Location: OX388323.1:12215745-12218468[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-07 3.4e-05 24.9 0.0 3 35 32 65 30 72 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-07	3.4e-05	24.9	0.0	3	35	32	65	30	72	0.91

Sequence Information

Coding Sequence: ATGGGGAAAGATAGAACTACAGCTTTTGAGAGGACTGGAAGTGGAGTTGAAAAACTATCAAAAAAAACTTACAATAGGTTCATGTACAGCCAAGAGATGCTTGAACTAGCTTTGAACGAAATTAGCTCTAAAAGAGAATCCTTAAATTCAGCCAGCAAGAAATATGGTATTCCAAAATCTACATTACACAACAAAATTCATTTTAAAGTTCCACTGGCTAGaaagatgggtccttctacttttttgacgcatgaagaggaagaaaaaatagaaagatacataatagaccttgcaaaattgggttttccgcttaacacagaaaatgtcaaagatactgtgcaggaatttttgaaaagatcagaaaggaaaacttcttttattaacaatcgcccgggagaaaaatggatgaaattatatttaaagagacatccaaaaataacgaaacgcaatgccgagttgatttctcgagctcgtgcagcggtagaagaaggagctatcagaaaatggtttgatgaattaaaaaaatatttggaagaagagaacgcactggatatattcaatgatggcagaagactatttaatgcagatgagactggtgtacagacctgtccaaaatcggggaaaatacttggaccgaaaaactataaaaatttgtacgaaattgcagttggaaaagaaaaggagtcaattacagtattatgtaattattcggcggatggagaagccgctccaccaatcattgtatatccatacaaacgagttcctcgagatatagtagcttcggtacctaaggaatggggcataggcagatcagatagtgggtggatggtttcagaaacatttaatgcttacataatcaacgtattttatccatggttacttgcaaaaaatatacaatttccaatattgatgctgttagatggtcataaatcgcacattaacaagcctttaattgacttttgtgttgagaaaagaattttgttatttgctctataccctaatgcaacacacatattacaaccatgtgacgttgcaatatttagatctttaaaacaaaattggaaatcggtggtaaaacaacataagcaaacaacaatgaaacaagtcactaaattgaacttcgctcccctatttgaAAAGGCATTTAATGCTACCAAAGATGTTGAAATGATCAAGAATGGATTTAAGCGTTGTGGTCTCTTTCCGTTTGACCCAAATGCAGTCGATTATTCAAAATGCATTCCTACCAGAAGAGAACAAGTTATGCATAACTCAGAATTGAACAATTCTGTACTTATTACAACTGAAGATATGCAATCCACAGTAAAAGTGATCGAATTCGCCATAGGGATCAATATGAAAAATGAGTTTTTAAAATGTGAAATTTCCAAATTAAGTCACACCCATCCATACTTTGCTTTGTGGTATCAGTGCAAAAGAGGCGAGATAAATTTCACTCCAACTCCAGTGCTAGATTCCTTTGGGATTAGTTATTCTACACCAAAGTCAGGCAAAGGATTGACATCGGAACCATTCAGTCCTTGCACAAATGATACCGCTCAATTAATCGATTTCTTGCTTGAAGAGGATGATAACACATTTATTCATGCACAAAATACTGCTTTTGAAATTCAGGAAATCAACATTTTAGATATAGAAAATGCAGAACAAATACGTACACAGGGAATTGAGCCTCAAAATACTGGTGGTTTAGAGCAAACATCAATACAATCAGTTGATTCGAATACAGAAAAAAGTACTTACATTGAAATTTCAGAAATTCAGATTTTAGATACAGAACAAACATTAATACCAGGAAATGAGCTTAAAAATGTTGGTGCTTTTGAACGCACGTTAATAGAACCAAAATCCAATGCTGAAAACAATTCTCTGAATTTACCAAAAATCATTCCATTACCTTGGTATACACAAGATGATACAAAAATTATCAGTAGCTCAATAGAAAATGAACCAAACGAGGGTAAAAATAATAGCATTATGGTATCAAACGACATTGCAACAACTTCTTCTTCATCAAAAATCAATTATTCATTGGACGAAATTTTGAAATTACCCGAAAAGCCAATTAAAACCAAACGAAAATTGCACTTTGCGCCTTACGGTCTGACATCCAAAAAATATGACGAATATTACAAACGTATAGAAAACGAGAAAAATGAAAAAGAGAATTTAATAAAACTTAGAAAGGAAAAAAGGGAACAACAAAGAAAGATCAAGGAGGAAAATCAAAAAATACGAAAAAACAATAAATCTCTGAAAACTAAACCACAACTAAACAGGCATGCTCTTAAGCAAAGGCTCTCAAATATTTCTACCTCTACTAACGGGGACACTAAAGCCAAAAATATACTAAACGCTGTTGAAAACGTATGTATAGAGGTTTCGTATTCCGATAAACATAAAGAAACACTAGACATTACGTATGGAAGCTTCGTTTTAACTTTGTTTCAGACGAAAAAAAGTAGCCGGTATTTTGTAGGTAAAATTCTAATGATCGATCACGAAAATGGAAAATATAAAGTTGATTTCTTACGAAAAAAAATGTCAAAGAAAATAGATGAAGGTCGTTATTACTTTTATTACCCTAACGAGAAGGATATCAGTGAAATGATAAGTAAAGACATAATTAAGGTTCTGGAGCCGCCAACACTGAATAGACGAGGACAATTATTTTTTAAGGAAGATCTATCCATGGCTGAGTAA
Protein Sequence: MGKDRTTAFERTGSGVEKLSKKTYNRFMYSQEMLELALNEISSKRESLNSASKKYGIPKSTLHNKIHFKVPLARKMGPSTFLTHEEEEKIERYIIDLAKLGFPLNTENVKDTVQEFLKRSERKTSFINNRPGEKWMKLYLKRHPKITKRNAELISRARAAVEEGAIRKWFDELKKYLEEENALDIFNDGRRLFNADETGVQTCPKSGKILGPKNYKNLYEIAVGKEKESITVLCNYSADGEAAPPIIVYPYKRVPRDIVASVPKEWGIGRSDSGWMVSETFNAYIINVFYPWLLAKNIQFPILMLLDGHKSHINKPLIDFCVEKRILLFALYPNATHILQPCDVAIFRSLKQNWKSVVKQHKQTTMKQVTKLNFAPLFEKAFNATKDVEMIKNGFKRCGLFPFDPNAVDYSKCIPTRREQVMHNSELNNSVLITTEDMQSTVKVIEFAIGINMKNEFLKCEISKLSHTHPYFALWYQCKRGEINFTPTPVLDSFGISYSTPKSGKGLTSEPFSPCTNDTAQLIDFLLEEDDNTFIHAQNTAFEIQEINILDIENAEQIRTQGIEPQNTGGLEQTSIQSVDSNTEKSTYIEISEIQILDTEQTLIPGNELKNVGAFERTLIEPKSNAENNSLNLPKIIPLPWYTQDDTKIISSSIENEPNEGKNNSIMVSNDIATTSSSSKINYSLDEILKLPEKPIKTKRKLHFAPYGLTSKKYDEYYKRIENEKNEKENLIKLRKEKREQQRKIKEENQKIRKNNKSLKTKPQLNRHALKQRLSNISTSTNGDTKAKNILNAVENVCIEVSYSDKHKETLDITYGSFVLTLFQTKKSSRYFVGKILMIDHENGKYKVDFLRKKMSKKIDEGRYYFYYPNEKDISEMISKDIIKVLEPPTLNRRGQLFFKEDLSMAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00179236;
90% Identity: iTF_00179236;
80% Identity: iTF_00179236;