Acin025159.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- -
- Assembly
- GCA_947579605.1
- Location
- OX388311.1:23696572-23704337[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-05 0.0097 17.0 0.0 3 36 18 51 16 56 0.88 2 2 0.00093 0.19 12.9 0.0 4 40 232 269 230 271 0.90
Sequence Information
- Coding Sequence
- ATGCCAAAGGTCACATCTAGCTGCGTAAAATACAGCAAAAGGTACACAGATCAGGATATTCAAAACGCGTTACAAGCGGTTAAAAATGGAATGCCAAAGAAAACAGCCTCCAAAAAATTCAATGTTCCCCGAGCTACCATACAAtttagattaaAATTTAAAACTATAGTTGGTGAAGATAAAATTAAAGAATTCGAAAGCCAAACACCTCCTTTTGCATCTGCCGAATATCAGGCTCTGCTTCAGATTTATGAAAAACTTAAACCACAAAATTCCATTGGTATTAGAGAAAATCCAGACTCGATATTTATGGATGATATGTGGTACCCAATAGACAATATACCAATTTCGTTATCACAAACTGATAACAACGATCAAAATACATCTTTAAACCTAAATACAAACAATAAGAATGAAATAACCAACGAATCAACTCCTCAATCAAACCCCATTATTGAGTACACTGAATTCCTGGAAGATGTAGAAAATTTGCAACTACCTTCAAATACGAAAATACAAGCACAAATAGTCGAAAAAACTCCAAAAAAAAAATACTGTTCTACGAGATACCCTTCAATGGCCAACAACCCCCGTACGAAAAGAATGAACAATAATACAGCTGAGCCTAGAATAACAAAAAGAAAAAGCAGAAGACTTATTGGCTCTAGGTCATACAAAAATTATTTTGCAGAAATGCTGAATTTAGCAGTTCAGTTGGTAAAGGAAAATAATGTTTCATCCAGGGATGCTGAAAAACAGTTTGGTATACCTCGACGGACAATTTTGAATAAAGTAAACAATCTCCATGTTAAAGATGTCGGCTCCCCAATCCGATTGTCGAGTGAAGAGGAATCAAAAATCGTGAAGGTTTTGATTGCTGCATCGGATTTTGGATGTCCATTGACAAAAATTGATTTACAAATGAGACATTCTCATCATTTGACATCCAGAGCTACACAAAACATTAAACAAGTTAGAGCTCAAAAAGGAGTTACAGAAATGATGTCTTTCTTTGAAAATTTACAGGAATGTTTAAAAGATGTGCCTTCCACAAATATACTTAATTTTGACGAGACTAATTTTACCGATAATCCGGGAAGTTCCAAGTGTATATTTCGAAGAGGTATAAAATATCCTGAACGGATCATGAATTCTACAAAAAGTTCAATATCAGTGATGTTTACGGCAACAGCCAGTGGTAACTGGTTGCCAATATATGTTGTTTATAAGGCAGAAAACATGTACTCTGGCTGGATTTCTGGTGGACCGCCTGGGACAAGGTATAATTGCAGTAAATCTGGGTGGTTTGACGCTAGAATATTTGAAGAATATCTTGAGACTGTAATTGTCAAATGGGCTGAATCCCTTTCAGGAATATATCCACTCAACCCGAAAGCTGTTCTCAAACGTATCCCAGAATATCATGAAGAGATAGGTACGTATGGGATAGATCAAACATTGCTAAACTTCCTAAAAGACTCTAGATCTCCGAAACCACTAGAAAGGGTACGAAATAAAAAAATCACTGTCGAACCAGGAAAATCTTTGACAGTGAATGATTTTAATAAACCTGCAGAAAAGTGTTTACAGAGGAATACAAAAAGTAATCCAAGAAAAAATAAATCTAAAAAAAATACCATTCAGCAACCTAATGAAAATGAAACTTGTATTCGTAATGAAGAATCTATCACAGGTAGTATGAAAGAATGTTTTTTTAATGAAGAAGAATTTGATGAAACTGAGCAAATCAATGTTATTCTTGATGAGAAAACTGGTCTTCTGGAAGAATGTTTTGTTCACAAAGAGGAATTTCATGAGAAAAGAAATGAAACTGTGCCAAATAATATATTTCTTGACGAGAAATCTGGTCTTGTGGAAGAGTGCTTTGTTCGTGAAGAGATATTTTATGAAAAAATAATTGAATCCGAACAAATTTGTAAATTTCTTGATAAGAAATCTGATCTTATGATAAACGACATTGAGAAAGAAAACAAAAAACCTAAAATAAATATTATATCAAATATATTGTTAAAATCTGCTAATACTGATGATTTCAAAAGTGTGCCGTCAACGTCTAAGCGAATACTATTTCCAAAGATGGTCGAAAGTGATTCTGACAGTAATTCTTCCATTCAATTTTCAATCAATGATTCAACGGACACGGAAGAATTTTTATCTTCAGATGAAGACACAATAGATGAAAAAATATGTAATAAAGAATACCAAAGTACATGTGATATTGAAAATAATCTTGAAATAAACACTTACACTTTGGTAAAATTTAAGGGCAAAAAGAAAATAAAATATTATGTGGGAAAAGTTACTGAAATCGAAGGGAGTTACGTGACAATAAATTTTATGCGTAAAAATGATCAAAACCTTTTTTACTGGCCACAAATAGAAGATAAAAGCCAAATGCTAGTTTCTGATATAGAAAAAAAATTGTCAACTCCTATAAGTGAGAGACGTGGTTTGTTGAAATTCAAAGAAGACTTACAAAAATTTGATGTTCTCTAA
- Protein Sequence
- MPKVTSSCVKYSKRYTDQDIQNALQAVKNGMPKKTASKKFNVPRATIQFRLKFKTIVGEDKIKEFESQTPPFASAEYQALLQIYEKLKPQNSIGIRENPDSIFMDDMWYPIDNIPISLSQTDNNDQNTSLNLNTNNKNEITNESTPQSNPIIEYTEFLEDVENLQLPSNTKIQAQIVEKTPKKKYCSTRYPSMANNPRTKRMNNNTAEPRITKRKSRRLIGSRSYKNYFAEMLNLAVQLVKENNVSSRDAEKQFGIPRRTILNKVNNLHVKDVGSPIRLSSEEESKIVKVLIAASDFGCPLTKIDLQMRHSHHLTSRATQNIKQVRAQKGVTEMMSFFENLQECLKDVPSTNILNFDETNFTDNPGSSKCIFRRGIKYPERIMNSTKSSISVMFTATASGNWLPIYVVYKAENMYSGWISGGPPGTRYNCSKSGWFDARIFEEYLETVIVKWAESLSGIYPLNPKAVLKRIPEYHEEIGTYGIDQTLLNFLKDSRSPKPLERVRNKKITVEPGKSLTVNDFNKPAEKCLQRNTKSNPRKNKSKKNTIQQPNENETCIRNEESITGSMKECFFNEEEFDETEQINVILDEKTGLLEECFVHKEEFHEKRNETVPNNIFLDEKSGLVEECFVREEIFYEKIIESEQICKFLDKKSDLMINDIEKENKKPKINIISNILLKSANTDDFKSVPSTSKRILFPKMVESDSDSNSSIQFSINDSTDTEEFLSSDEDTIDEKICNKEYQSTCDIENNLEINTYTLVKFKGKKKIKYYVGKVTEIEGSYVTINFMRKNDQNLFYWPQIEDKSQMLVSDIEKKLSTPISERRGLLKFKEDLQKFDVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -