Acin013444.1
Basic Information
- Insect
- Athripsodes cinereus
- Gene Symbol
- -
- Assembly
- GCA_947579605.1
- Location
- OX388319.1:5197193-5199064[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-10 9.3e-08 33.1 0.0 2 40 19 56 18 60 0.88
Sequence Information
- Coding Sequence
- ATGCCAAGAATATACAAACCCAGGATTGATGGCCCAAATTACTGTAAATATACACAAGAAAAAGTGAATGCTGCCTTCGAAGACATAAAAAAGGGAAAAACAATAAGGCAAGCTTCGAAGGAATATGGTATTCCAAGAACAACACTACAGCGACGGCTAAAAGGGACCCATGTAAAGAAATATGGTGGACAGACTATCTTGTCTGATGAGGAAGAGGCCAATCTGGTAAAGGGTTTACTTGCCTGTGCCGAGTGGGGCTTTCCTTTAACTACTAAAGACATTCGAATGCTTGTCAAAGGATACATAGATAGGAAAGGAATCACTGTGGCAAAAtttaaaaacaacttgccaggtattgaatgggtaggctcttttttgaaacgccacaaaaatttaacagtgcgttttggtgaaaacataaaacgtgttcgggctgaagtaaatacggaaaccatccaaaattattttgataacttgggcagtgttctcttggatgtagaatccgaatcaatcgtcaattatgatgaaacaaatttctctgatgatcccggaaaaaccaaatttattgtgaagaggggtgctaagcatccagaaaatataatagattccagtaagaccagcatttcagtgatgattgcagctagtgcctcagggaaagtattaccaccatatgtggtatacaaagctgagcacttatatccaacatggatagaaaatggaccagcaggggctcgatacaatcgcaataaaagtgggtggtttgacggtcctatttttgaagactggttcaataatttagccttaccgtatttgaaaagttgcccatcaccacgggtattaataggtgataatttatcatgtcacctatcacaatctgtgattgaagcatgcacatcaaatgacataagatttgtcttattaccaccaaattctaCACATATTTGCCAGCCCCTTGACGTGGCTTTCTTCGGTCCATTAAAGAAGAAATGGAGGGAAACTCTTCTGGTATGGAAAAAAAACAACAGGGGCGTTTTTCCAAAGTCTGATTTTCCAAAACTTCTGGATGATACTTTTACAGCCTTGGATTTACAGAGTACTGCAAACATTAAAGCTGGGTTTGCAGCATGTGGAATTGTACCTTTGGACAGATACAGAGTTTTGAAGAAGCTACCAAATTTTGAAGCAATATCAACCACCACTGATTGCAATCCATCAGTATTGACTGATTCATTTATAGATTTATTGAAGAGCGTAAGAGAGAATAAAAAATCTGAACCAAAAAAGAGAGGCAAGCGTATGCAAGTGGAAGCTGGAAAAAGCGTAAGCTTTATTTATGGAGATACTACCGAATATTTAGACAATGATGAATTAACTGAAGAGATGATAACAGATCCCCTAGAATCATTTAATGATGAATTTACTGAAGAGATGATAACGGATCCCCTAGAATCACTTAATATTGATAAAGGAGATACAAATTTACTAATTATGGTGAATGAAGATGTTGGCTTAGACGACTTTGACAATGAGACAAGCTCAGACCCAATTCAATCTACATCAGTTGACACAACTAAAAAAACCGATTCTCTTCCACCAGGTAAAGGAGATTATGTTCTCGTAAATTATGGAACAATAAAAAATCGCAAACAATATATTGGCAATATTATTGAAATTACGAATGATAATTATAAAGTAAATTTTCTGCGAAAATCTGTTGGGAAAAAAATTATTTATTTTTCTTACCCAAAAATTGAAGATGTAGATGAAATAACCAAAGACCAAATTATTTTAAAATTAAAACCACCAGTCGCATTAAGAAGGGATAGACTTGTTTTTCGTGAATTGGAAAAATCAAACTTCAATATACATTAA
- Protein Sequence
- MPRIYKPRIDGPNYCKYTQEKVNAAFEDIKKGKTIRQASKEYGIPRTTLQRRLKGTHVKKYGGQTILSDEEEANLVKGLLACAEWGFPLTTKDIRMLVKGYIDRKGITVAKFKNNLPGIEWVGSFLKRHKNLTVRFGENIKRVRAEVNTETIQNYFDNLGSVLLDVESESIVNYDETNFSDDPGKTKFIVKRGAKHPENIIDSSKTSISVMIAASASGKVLPPYVVYKAEHLYPTWIENGPAGARYNRNKSGWFDGPIFEDWFNNLALPYLKSCPSPRVLIGDNLSCHLSQSVIEACTSNDIRFVLLPPNSTHICQPLDVAFFGPLKKKWRETLLVWKKNNRGVFPKSDFPKLLDDTFTALDLQSTANIKAGFAACGIVPLDRYRVLKKLPNFEAISTTTDCNPSVLTDSFIDLLKSVRENKKSEPKKRGKRMQVEAGKSVSFIYGDTTEYLDNDELTEEMITDPLESFNDEFTEEMITDPLESLNIDKGDTNLLIMVNEDVGLDDFDNETSSDPIQSTSVDTTKKTDSLPPGKGDYVLVNYGTIKNRKQYIGNIIEITNDNYKVNFLRKSVGKKIIYFSYPKIEDVDEITKDQIILKLKPPVALRRDRLVFRELEKSNFNIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00179148; iTF_00179149; iTF_00179150; iTF_00179166;
- 90% Identity
- iTF_00179148; iTF_00179149; iTF_00179150; iTF_00179166;
- 80% Identity
- -