Basic Information

Insect: Athripsodes cinereus
Gene Symbol: bab1
Assembly: GCA_947579605.1
Location: OX388307.1:6473882-6485106[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.00032 0.064 14.4 0.0 1 38 469 506 469 512 0.86

2 2 1.3e-07 2.6e-05 25.3 0.0 4 35 799 829 799 836 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.00032	0.064	14.4	0.0	1	38	469	506	469	512	0.86
2	2	1.3e-07	2.6e-05	25.3	0.0	4	35	799	829	799	836	0.92

Sequence Information

Coding Sequence: ATGTCAATGCCTCCGCAACAGTTTTGTGTGAGATGGAATTCTTACCATACAAATCTACAGACTGTGTTTCCAAAATTGCTGACGACAGAGAATTTTGTTGATGTTACGTTAGCGTGTGAGAACAGGCAGATAAAATGTCATAAAGTGGTGCTGAGTGCTTGTTCTACGTACTTTGAAAGACTTCTCATACAGAACCCCTGCAAACATCCTATCATATTCATGAAAGACATGAGGTTTTCAGAGATGCAGTCCCTGGTGGACTTCATGTACAAAGGAGAAGTAAATGTATCACAAGATGACCTGCCTAGTTTATTAAAATCTGCCGAGGCCTTGCAAATTAGAGGTCTCTGCGGTACAGAGAATTCCAACAGCAATCAAGAGAGCCCACCAGCCTCTGCTCCTGCTCCCCCCGCCCCACACCCTACTAGTTGTAATGCCTCTGTTAACACATCACCCTCACCTAGACACCAACAGGATGCCTCAACAAATTCAAAATCCTGCCTTCAGCCTCAATCACCTAACCCGTACTCCAATCAGTCAGCATCGCCGTCTAGTAATGGAACCCAACGCTCAGAGAAGAGGAGACGAGAAGACAGTCCCGACACTTGTAAACTCAAACAAGAGACTGTGGAAGAAGACGGCCTATATTATGGAGATATGGAATGTGGACAGCAGGATGAAGAAGACTTACTACAAACAGGGAATGTATCGGGACAGCAGGTTTCTGGAAACAAAAAACAACAACCCAGCCTCAGAGTCAAATCTCAATCAGAATTGTTCAAAAGGGAAAATGATCTATTAGCTAACAAATATCAAACTAAAGAGAATAAAAAATCTATTCTAGCTGAGAAACTAAACCAAAGGATTAGAAACAAACAAATGTCAGATTATGATCCATTCAGTAATCATTTTTTGGGCAATTTCTTACAAACGGGAAATCAAGAGAGTAGTAGTGAATTTTTAGATGAAAAGATTTTTGAAAATGAAGATTATTTGAAAATGTGGTTGGAACATAATCAGGAGTTAGAAGTCTCAATGTCTCACGCAACCACAGAACCTGATTTAAAAATCAAAAAGAACTTAAAGAAACAACCATTGATTACTACAAACAAAGAAACAAAAATAACCAAAACTTGGGGGGCGAACCCTTTCACAAACAACTTTTTGAATATTGATCAAAAAACACAACCAAATGAATTAAAACCAAAGAACAAGAAGAAAGGTGATAAATATATGGGAGTTAAGAAAGTCCCCAAAGGTGTGGATGGAGTAGATCTGTTAGATTTTGTTGAGCCAGGAGATTTAGATCAATTCTTAGCAGGGAAGGAAGTGAGCTCATCGGGACTTTCTAGAACTGCTGTTGAACAAGCAATGCTCGGGAAATATAATCCTAACAGAAGATATTCCAATGAAGCCATGTGGGCAGCTCTCATGGATGTCAAAAAAGGAGGAAGTATTTACCGAGCTGCTCAAACTCATAAAGTGCCTAGAAAGTCACTACGTAACTGGATGAAAAGATGGCACATCAAATCATCATTCCCGATGCCACAACAGTTAAAACAGTTTGTAGAAAATAATCGTAAAACCAAAGAGGAACTAAGAAGGGAGCTCACCAACAGTTTGCTCAATGCCATAAATAAGGACAAAGTCAACATTGCAAAAGATGAAAACAACATGGATACCAACCAAACTGGCAATATTGATGAAGTTGAGAAGAATATAAACTTTGAAAATGAAGATGTCATTCTTAATTTGAAAATGGACATTGATAGAGATTGTGATGAATCCCAAGATGAAGCTGTAGACTTGCGTCAAGAAAAACAAACTCATTCCATAGACAATGAAGATAATATTCTAAATTCAAACAATACAAATGCCAAAGAGATGGAAGAAAAATATGATGACAGGATTATAGATATGTCTGGAAATGTCCTTTATGATGAGAATATGGATGTCCCAATAAAAAATATAGATTACAATGTTGTCAGTAATCCATTTACGCATGTGAATGTCAAACCAAAGAATACAGATAAGAAAATCGTTTCTTTTTCTAATGTTGAGCAGTTGGCCGGAATACAGATTGCCACAACATTTCGTCCATTTGATGCGGAGCGTCCTCAAAGCAGAGAACTGGACGCCGAGTCCTACATAAGACAAGCACTCATTCGACACTTGGGTTTATATGAAAACGGGGACAAAAAATCTACTAGATGTGATCAATCAAAGGGTTCGGATAGCACGCAAGAAAATACACTGACTTCACAAGAAGTTTTCAAACGTTTATTCCTCAATCCATTATCAAATCGAGTTGGCGATATAAATGATTCTACTCTTGCTCAAGATATTACAGTCGATTTACAAAATTCAAAGTCTTATAAACGCTACACATCTTTAAATCTCAAAGAAGCGTTGATTGCCGTGAAGAATGGCACTAGTGTTTATGGTGCGGCCAAAAAGTATGGAATACCAAAGAAAACTTTGAGAAATTGGATGCAGAAGTATAATATTAAGAGTCAATTTTCAAGAGAAAAGAAAGATTTCAGAATTCACGAGCTGATGACTGAAGCAGATATGATGAACTTTTCTCCCACATAA
Protein Sequence: MSMPPQQFCVRWNSYHTNLQTVFPKLLTTENFVDVTLACENRQIKCHKVVLSACSTYFERLLIQNPCKHPIIFMKDMRFSEMQSLVDFMYKGEVNVSQDDLPSLLKSAEALQIRGLCGTENSNSNQESPPASAPAPPAPHPTSCNASVNTSPSPRHQQDASTNSKSCLQPQSPNPYSNQSASPSSNGTQRSEKRRREDSPDTCKLKQETVEEDGLYYGDMECGQQDEEDLLQTGNVSGQQVSGNKKQQPSLRVKSQSELFKRENDLLANKYQTKENKKSILAEKLNQRIRNKQMSDYDPFSNHFLGNFLQTGNQESSSEFLDEKIFENEDYLKMWLEHNQELEVSMSHATTEPDLKIKKNLKKQPLITTNKETKITKTWGANPFTNNFLNIDQKTQPNELKPKNKKKGDKYMGVKKVPKGVDGVDLLDFVEPGDLDQFLAGKEVSSSGLSRTAVEQAMLGKYNPNRRYSNEAMWAALMDVKKGGSIYRAAQTHKVPRKSLRNWMKRWHIKSSFPMPQQLKQFVENNRKTKEELRRELTNSLLNAINKDKVNIAKDENNMDTNQTGNIDEVEKNINFENEDVILNLKMDIDRDCDESQDEAVDLRQEKQTHSIDNEDNILNSNNTNAKEMEEKYDDRIIDMSGNVLYDENMDVPIKNIDYNVVSNPFTHVNVKPKNTDKKIVSFSNVEQLAGIQIATTFRPFDAERPQSRELDAESYIRQALIRHLGLYENGDKKSTRCDQSKGSDSTQENTLTSQEVFKRLFLNPLSNRVGDINDSTLAQDITVDLQNSKSYKRYTSLNLKEALIAVKNGTSVYGAAKKYGIPKKTLRNWMQKYNIKSQFSREKKDFRIHELMTEADMMNFSPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00179552;
90% Identity: iTF_00179552;
80% Identity: iTF_00179552;