Basic Information

Gene Symbol
Arid2
Assembly
GCA_947579605.1
Location
OX388309.1:15765321-15781268[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-22 1.9e-18 68.1 0.0 2 89 17 102 16 102 0.94
2 2 1.2 8.6e+03 -1.3 0.0 43 68 330 357 327 372 0.54

Sequence Information

Coding Sequence
ATGACTAAGTTCCATATCAAAACAACTTCTTCGACTTATTTGCACGATAAAGATGTTTTCTTAACTGAATTGCGCCATTTTCATGATGTCCGAGGATCTACAATTCGCCATGTACCAGTGATTAATGGGAAGGAGATAGATTTATATCATTTGTATATGCTAGTAACTCATCATGGAGGCTGGGTGAAAGTTAACAATCAAGGCTTATGGGACAGTTTGTTAAAACCACTTGGATTACCAGCAGCATGTGTGAATGGAGGCATTGGTGTTCGGCAAGTGTATCTTCGATATCTCGAGAGATGGGAGCGTGCCAGGGGCAGTGGTGTGGGTGGGGGAGGTGGTGCTGGGGGTGGGGCAGGAGGGGGAGATTTGGATGCTGGAGGGGATGATGGAGATGATGATAGACCTCGAAGGGCTGCCTGGGGAACACCTAGACCAAAAAACAATGTCCCACTCACGTATAATCACAACCAGCATAACATCTCAGATCATGTGAGAGAAAGTATTGGTCTGTCTCCACTGCAGAGGTATGGAGGCAGCTCAGAACGTTTGGCTCTTTCACTTCTCAGTTCTTTGCCGAATGAACAAGATTTTGCTTTAAATGTTTGTACTATTTTGGCTGCTGATGTCAATAATAAACTCCCCGTCAACACAACTCCACACATTATCGACTTCCTTCTTGGACATGCAGCTGTCTACAATCACACGAGTCTTAGAGATGTAATTGGAAAATCATATAAAGATGCACGAAAGACAAGTATAGAACTCTATTGGATAGAGCATGCTCATCCAACTGCAACATTGGAACTATTGGATGAGAGGAGGTTTCCTGTACATGGGCTGGCAATGAGAGCCATCATGTCGCAATTACATTTAAATACTTGTCTTGTTAGTGGAGAATTACCACTGGATGATAAGGATCTGCCTATTCCCGAAGAGTTGTCACTATCAATAGATGAAGATGATAGCATAATGGGGAAGAAGTGTCACGGAGGTGCGAGGGATGTGATCTCCAGAAGAATCACCCAAGTGGCTACAATTATGAGGAATCTTTCATTTCATGAGGACAACTTGGCTATGCTCGCTAAGCATCAGACGTACCTCAGATTTCTGTTGCTTTGTGTGAATTCCTCGCAGAGTAATATTAGACAGATGGGGTTGGATGCATTAAGTAATGTTGCTCAAGAGCTGCACATCAAAGATCCAGCTACATGTCTACTGTCTAGACATTTATTTTCTACTCTCACATCTTCCCTCTGTTCAGAAGACAGAGCCAAACTTGTTGCCGCTTTAGAGGTTCTCAATAAATTGTCACAGAATGAAAATAATGAGGATGTTCTTTTGAGGTGTTTGGAACAAAAAATATACCAGCAAGTGTGCACTTATTTAACACTGCATGACATAATGCTGCTGGTGGTGACATTGGAGTGTGTCTACTCCCTCACATCATTGGGTGAGAAGGCTTGCGATTATATTGTTAAAGTTCATGGAGTGGTGGACACACTCGTTTCACTCATCACTGTTGAGGCTCAGAGCTATGGCCCTAAGGCATGTATTCTGATGCGTGTAGTGGAAACGGTTCCAGGAGGAGTTCCTGTTAATACTGGACATGCACCCAGTCCCCCGCCAGCCCTTGTGCATAACAATGTAACCAATCAACAACAGCAAAATACTTTACATCAGATACAGAATCAGAACAGTAACCAGGTGTCTTCACAAATCCAAATGCAAAATGTGATACAAAATACACCTTTGATAGGAAATACTCAACAACAGAGTCAGCAAGTCAAGACAGAGTCACTTCAAGTGGCTGCACAGGTAGCCAACCCCACGCAGCTCTCCATTCAGCAGCAACATGCACATCAGCAAGCCATACAAGAAAATGAACAGTTTGCATTAGCTTGGCTTCGTTCTACATGGGAACCCTGTGCTCCCAATATCAGACTCGACTCTGCTGAACTCTACAAGCAGTACATTGCATGCTGCCAGAAAGTGGGCAGGAAAGGAGTCATCTCTCCGTTACACTTTCCTAGATGTGTCAGGTCTGTATTTGGTGGAATGGTTGGTCCAAATCCAGTGAAAACTGTTAGTGGAGATACGCAGCAATGTTACATGGGAATCAAAATGAGACCTTCagctatgagtaaggcacagtcttcagctgctgctgctgctgctgctgctgctactgctgctgctgctgctactgctgctactgctgctactgctgctgctgGTCCATCATCACCTATATTGAAGGCTCAACTAAGTAAAGCAGAACAAAATAAGTTGGCATCTCATCATCACCTAGCTCAAGTGTTGAGCGAGACTCCATCTTCTCCTCCTCCCCTGGTGCAGTCTCAGAGCATTGGGGCTCAGCAGATCCTTCCTTCAGCAGCAGGAGTACCACAGGGGGCAGCAGGCAACCCCTCAAATACCTCTTTAATAAAACATTTGTTAGCACACAAGGTTAGTGCTGCACCAGGAAATGCAACCGATCGCATGGCAGTGCAGGTGACCCAGAGACAAGCACAGAACCAGCAGCGTATGTTGGGACAGGCCACTGGTAATCCTCCAACCACTATACCACAACAGTCCATTGTACCAGTAAGATATTTTATCAATTCAATGAATGTCATGTTCTTTAAATTTTTAATTTTGTAA
Protein Sequence
MTKFHIKTTSSTYLHDKDVFLTELRHFHDVRGSTIRHVPVINGKEIDLYHLYMLVTHHGGWVKVNNQGLWDSLLKPLGLPAACVNGGIGVRQVYLRYLERWERARGSGVGGGGGAGGGAGGGDLDAGGDDGDDDRPRRAAWGTPRPKNNVPLTYNHNQHNISDHVRESIGLSPLQRYGGSSERLALSLLSSLPNEQDFALNVCTILAADVNNKLPVNTTPHIIDFLLGHAAVYNHTSLRDVIGKSYKDARKTSIELYWIEHAHPTATLELLDERRFPVHGLAMRAIMSQLHLNTCLVSGELPLDDKDLPIPEELSLSIDEDDSIMGKKCHGGARDVISRRITQVATIMRNLSFHEDNLAMLAKHQTYLRFLLLCVNSSQSNIRQMGLDALSNVAQELHIKDPATCLLSRHLFSTLTSSLCSEDRAKLVAALEVLNKLSQNENNEDVLLRCLEQKIYQQVCTYLTLHDIMLLVVTLECVYSLTSLGEKACDYIVKVHGVVDTLVSLITVEAQSYGPKACILMRVVETVPGGVPVNTGHAPSPPPALVHNNVTNQQQQNTLHQIQNQNSNQVSSQIQMQNVIQNTPLIGNTQQQSQQVKTESLQVAAQVANPTQLSIQQQHAHQQAIQENEQFALAWLRSTWEPCAPNIRLDSAELYKQYIACCQKVGRKGVISPLHFPRCVRSVFGGMVGPNPVKTVSGDTQQCYMGIKMRPSAMSKAQSSAAAAAAAAATAAAAATAATAATAAAGPSSPILKAQLSKAEQNKLASHHHLAQVLSETPSSPPPLVQSQSIGAQQILPSAAGVPQGAAGNPSNTSLIKHLLAHKVSAAPGNATDRMAVQVTQRQAQNQQRMLGQATGNPPTTIPQQSIVPVRYFINSMNVMFFKFLIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00298845;
90% Identity
-
80% Identity
-