Basic Information

Gene Symbol
Kdm5
Assembly
GCA_947579605.1
Location
OX388328.1:10809962-10832185[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-24 1.5e-20 74.8 0.0 2 89 101 184 100 184 0.93
2 2 0.77 5.5e+03 -0.7 0.0 38 67 1344 1374 1325 1385 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGCGACGAGGCCAATGTAGAGATGAGTATGGGGGACAGCGCTTCACCTTTGAAGCAAGATATCTTCTCGTTTACGGTGCCCCCTGAGGCTCCTGTTTTCACTCCAACAGCCGAGGAATTCCAGGATCCTTTGGCTTACATCAACAAGATAAGACCCGTGGCTGAGAAGTGTGGAATATGTAAAATCAAACCTCCAAAGAACTGGCAGCCGCCCTTTGCTGTGGATGTGGATAGGCTGAGGTTCACACCCAGAATACAGAGACTCAATGAATTGGAGGCCATCACCCGTGTGAAGCTAAACTTCTTGGACCAGATAGCCAAGTTCTGGGAGCTGCAGGGTTCTCTATTGAAGATACCAACTGTGGAGAGGAAACCGTTGGATCTGTACTCTCTGCACAAGATTGTTAATGAGGCTGGTGGTTTTGACGTGTGCACCGCCGAAAGGAAATGGTCCAAGATAGCCGTGAGGATGGGACACCCGCAGGCCAAGGGTGTGGGCACTATCCTGAAGAATCATTATGAGAGAATCCTGTTTCCATATGATCTGTTCAGGAATGGAGAGGCAATTGATGTTAAGTTGCCAGAAGTGAAGGGAGAGATGACCCCCGAGAAGGCTAACACCCAGGGGGGATGTAAGAGAGGGGGCTCTGCGCAGAAAGGCTCCCCTAACACTGGGGGCCCGGAGACCAAGCCCATGCCGACTAGGAGGTGGAGGAAATTGAACGAGTTGGACGAGCAGGAGGGTACTCAGACGGAGGGCTGTCTGGGGGCCACGGAGACTCCTGGTAGTGACAGGAAGAAGGACCTACGCAGCAAGGCAACACCGACAAAGCAGGACACTACTAACTTGGATGATAAAAAGACCCCTGTGAAAGAGTCACCCAACAAGCGTCGCTGTGGTCAGCAACCCGTCTCTATGGCTTCATGCCCCCACTCTGTGCCTAGCAGTCGTCCTGTGAGATCGGCAGCTACCAGATCCTTACAGGCGCAGAGGCAGGACAGTATGACCGTCAATGTTGTGCCTGCTCAGCCTGATTCTGCAGATCCTTTGGCCAAGTACATCTGCCACAATTGTGGCCGTGGTGATGTTGAGGAGCAAATGTTGTTGTGTGACGGATGCGATGACTCCTATCATACATTCTGTCTGATGCCTCCGCTGGATACCATACCAAAGGGGGATTGGAGATGTCCACCTTGTATAGCGCAAGAGGTCTCCAAGCCCACTGAGGCATTTGGTTTTGAGCAGGCACAGAGGGAATATACCTTGCAACAGTTTGGTGAGATGGCTGACCAGTTCAAGTCGGAGTACTTCAATATGCCAGTACATATGGTGCCCACTCAAACTGTTGAGAAGGAGTTTTGGAGAATCGTGTCTTCCATAGATGAAGATGTCACCGTAGAGTACGGGGCAGACCTGCATTGCATGGATCACGGATCAGGTTTCCCTACCAAGGCTTCGAAGCATCTGTACCCTGGTGATCAGGAGTATGCAGACTCCAGCTGGAACCTCAATAATCTGCCCCTTCTAGAAGGCAGTGTACTGGGTCATATCAATGCCGATATTTCGGGAATGAAGGTTCCGTGGATGTACGTGGGGATGTGCTTCGCTACATTCTGCTGGCACAACGAGGATCACTGGTCTTACTCCATCAACTACATGCATTGGGGTGAGCCCAAGACGTGGTATGGAGTCCCGGGCAGTAAAGCGGAACAGTTTGAGACTACTATGCGTACTGCCGCCCCAGAACTATTCCAGTGGCAGCCTGATCTGCTGCATCAGCTTGTTACCATTATGAATCCAAATACACTCATGCACGCGGGGGTCCCGGTCTTTAGGACTGATCAGAATGCGGGAGAATTTGTCATTACCTTCCCACGAGCTTACCACGCTGGATTCAACCAGGGATATAACTTTGCCGAGGCTGTCAATTTCACACCCGCCGATTGGTTGAAGATTGGCAGGGAGTGCATCGATCACTACTCCAACCTGCGCAGGTATTGTGTGTTCTCACACGACGAGCTGGTCTGCAAGATGGCTCTGGAGGCTGATAAGTTGGAGGCTACAGTAGCCTTGGCTACGTATCAAGATATGAGGGCTATGTTGTCGCAAGAGAGGAAGTTGAGAAAGAGTTTGCTTGATTGGGGAGTCACCGAAGCGGAAAGAGAAGCGTTTGAGCTCCTCCCTGACGACGAGAGGCAGTGTGTATACTGCAAGACAACCTGCTTCCTGTCCGCAGTCACGTGCCCCTGCAGTGAGAATCTGGTCTGTCTGAGGCACTACACGGAGTTGCAGCACAGTAATAACGATCGCAAGTGTCCCAGCACCAAGCATAAACTCAGATATCGCTTCACTCTGGACGAGTTGCCCAGCATGCTGGAGAAGTTGAAACGTCGCTCTGAAGCTGTTAAAGAGTGGGCGGATGCCGTCAGCAATGCTCTGGATCCCAACACTCCCAAAACATGTGATCTCGAGGGGCTGAGAGCACATCTTAAGAAAGGGCAGGAGTTGAAGATGCACAAAGCTGACATAGTGCGTGCACTGGCCACCGCGATCGAAGGTGCTGAGAAGTGTGCCTCTGTGATCCACCAGCTGGACCTGAACAAGATGAGGACTAGAACTAGACACAGTGCAGACCTCAAATATAAACTCACCGTTGAGGAGTTGACGCTCTTCTGTGAGGAGATTGATGGACTTGCATGTGTCCTGCCAGAAGGTTCCGCCGTGAAGGAAGTCCTCCGTCAGACGATAGAGTTGGAGAGGTTGGCCGACTCCCTGTTGGTGGGAGATCCTGGCAGCACCCCCGAGAAGATCAGGGACATGGAACAGTGCGTGGAGAGGGGATCAGCGCTGTGTATTCAGCTGCCAAAGTTGACACTTATATCTAATAGATTGCAGCAGGAGAGATTCCTGGACGAAGTGAAGATGCACCGTGAAGAGTATGACACATTGAATTTGGAAACAATTGGCAGACTGCTGGATCAAGGAATTGCTATACAACCACATTACATACTCGAGACTCACCTGGCAGCACTGCACAAACTTAAACTACAGGTCGAGAAATGGGAAGAGCGAGCCAAGGGTGTTCTGAGCCCCTCTGGAGACCACCAGTCCTTGGAAGAGATAGATGGGCTGCTCAAATCGGCTGACAAGATAGAGGCATATCTACCAACCAGACAACATCTTAATACCACATATAATAATGCTAAGGAGTGGCTTAATATGGTGGAGGAGATGCAGTCTAAAGAATCATACCCCTACTTCAGCACATTGGAGAGTGTCGTAAAGAGGGGCCAGGCCATCAGTATCAGTCTGTACGAGAAGGACATGTTGGGAGAGGCGCTGGACTCTGCTAGAGTCTGGAAGGAGAAGACGTCACGTACGTTCCTCAAGAAGGGATGGCTTCTTAGTCTTATGGAGGCCTTGAGTCCACGCACGGACGTCCTCACTGGAGCTAAACGTTGTGTAATTCAACCTCCGCCTCCTCCTCCAACACCACAAACTGGCCGCGGACGACATCATCACAACACATCATCGGCTGATAGATCAGCGGCCAATAACAATAATAACAGTCTCAACAACGCATCGTCGGGTAGCAATACGACAGGAAATACAGCATCTGGGGCTCGTGCATGGTCTCCCCCGCCTTCCACGCCTGAAGCGGAACAGTTTATGAAGTGCTTTAGCGAAGAGAGGTCTCCCACACAGATAGTCGCCGCTTTCAAAGCTGCTGAAGAACGAGAGATGGCCAATATGAGAGATTTGAGGTCCCGCAATCTCCGCAAAGATATCCGCATGCCCCTACACAGCGTGACATATTGTTACTGCCTCAAGCGTCAGTACGGTGTCATGACACAGTGCGACTTATGCAAAGAGTGGTATCACGCGTCGTGCATCAACGCCCTACCGGCCGGCGAAGCAGAAATGCCACCGGGACGTTTTCTGTGTCCGGGATGTGTCAGGACAAAACGTCCTCGTCTGGAAATTATCCTAGGTCTCCTGGTCGCACTGCAAAAGCTTCCCGTCCGTCTCGCCGAAGGAGAAGCGCTTCAGTGTTTAACCGAGAGAGCTATGGCTTGGCAGGACGTCGCCAGGGCGTTGCTCGCTTCAAAGGAGGCTGCGAAAGGGTTAGCGACTATTGTGCAGACGGAGAATGCTCAGGCTGGTGGTCGTGGGGACAAGTGTGATAAGTTGGGTGGGGATGTACAGCGTGGTAGTGGCAACAAGGCCTCCAGGGGAGGTGCCATGTCACCCACGCACGACACCATTCATAACAGAAATAGCTCAGCGTCAGAACACGCTTACTCCGCATCGCCCCCTGCTAACGTAGGATCATCGCAGGGAGGTTCTGGCGGTATCACAGCGTCCGCAGTACGCACACTGAGACTGTCACCGCAGCTGATGCACAAGCTGGAAGACTTGATGATGGAAGGGGATCTGCTGGAGGTGACGATGGCAGAGACGCAGCAGATGTGGGGACTGTTGAGGGCTGCCAGAGATCAAACCAGTGTCTGGAGTGAACGAGGTGCATTGGGTGCCTTAACTGATATATCTGGCAGCAACAGTTCAGCTCTCAACGACTCCCGAGAGTCCCCCGTAAAGAGAGTTGGTGCAGCCACGCATCAGCAGCAGATGAAACGAGCGCGACGCACCAAGGAACAACAACAACAGCAGATGTTAATGATGATGCAGCAACAAGGAGGCGCGGGGACGCCCGGAAACAATAGCGCCAACAGTGCTAATAATGCTGTTTTGGGTAACACGACGCCCAGCGGTGCTATGAACAAATCACTCACAGGCAAGAAAATGAGGAAAGCTTCGCCAGCTGCTCCGAGACGAGCGTCTGCCCCCGCACCCACAATCACAAATTATCTCAACAGAAAACAACAGGGTGTGGCCGGTGGCAGTGGTCTGATGATGAAGAAGCACTTCCTGGCCAAACAGGAAAGGAGGAGACGCGGGATGACGACCAAACAGTCGACCAGAGGTCGCAGAGCTGGAGTTCACACCAAAATGAAGAGGGGCGGCGGTGCCGGTATGAACAGTGGAGGTCCCGGCAGATTGCTCATGTCCTCTCCGGCAGGAAATGCAGCAGACACTAGGAATAGTAGTGCCGCAGCTGAAGGAGGTCTGCTCGGCAGGTCGGCATCGCCACAAACGGATGATGATGATTCCAGTCGTGACGCTAGTTCAAATGAAGACGATGAGGACTGTGCAGCATCTACGTGTCTCAGACCTACTGGTAAAGAGGTGGACTGGGTACAGTGTGACGGAGGTTGCGAGAAATGGTTCCATCTCCACTGCGTCGGCCTCTCAAAGAATTCTCTCAAAGCCGACGAAGATTACTATTGCAGTATATGTTCAAACGGAGTCAGCGGGAAGAAGGCCAACAAACCGAGAGACACGGGAAACGAGACGGCCAAAACGAGGGGAAACGAACGCGGAACAAAAGAAGAAAGAACAACAAAGAATTCCACCAAGCAAACAAATGCCAATAACAAAACAGAGACCAAACGAGAGAGATTAAGTCTCGAAGCTAAACGTTTGGCGGCCGAATCAGCTAATAATTGTAGTACTACTAATATCGAAGCCGTCGGCAAGAAATCAACATCCGATAATCTCATGTGTGAAGAAAAAATGGATAAAGACGAAGACACTTACGCGAGTGGTGACAGTCGGAGTAAATCAAAATCGTTAAGCAGTAGTAAAGTAGTTAAGGATGAAGAATTTAACGATGGTGGTGATGTTAAAAAAATGGACGTTGACGATGCGCTGACGACGACGACGCAAGCAAAAGTTTTATCGACAGACTCTACGTCCTTGGTTACGTCTTCTGATAGTGTGGAGATGAAAGACGATTCGTAA
Protein Sequence
MGKCDEANVEMSMGDSASPLKQDIFSFTVPPEAPVFTPTAEEFQDPLAYINKIRPVAEKCGICKIKPPKNWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIAKFWELQGSLLKIPTVERKPLDLYSLHKIVNEAGGFDVCTAERKWSKIAVRMGHPQAKGVGTILKNHYERILFPYDLFRNGEAIDVKLPEVKGEMTPEKANTQGGCKRGGSAQKGSPNTGGPETKPMPTRRWRKLNELDEQEGTQTEGCLGATETPGSDRKKDLRSKATPTKQDTTNLDDKKTPVKESPNKRRCGQQPVSMASCPHSVPSSRPVRSAATRSLQAQRQDSMTVNVVPAQPDSADPLAKYICHNCGRGDVEEQMLLCDGCDDSYHTFCLMPPLDTIPKGDWRCPPCIAQEVSKPTEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTQTVEKEFWRIVSSIDEDVTVEYGADLHCMDHGSGFPTKASKHLYPGDQEYADSSWNLNNLPLLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPGSKAEQFETTMRTAAPELFQWQPDLLHQLVTIMNPNTLMHAGVPVFRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKIGRECIDHYSNLRRYCVFSHDELVCKMALEADKLEATVALATYQDMRAMLSQERKLRKSLLDWGVTEAEREAFELLPDDERQCVYCKTTCFLSAVTCPCSENLVCLRHYTELQHSNNDRKCPSTKHKLRYRFTLDELPSMLEKLKRRSEAVKEWADAVSNALDPNTPKTCDLEGLRAHLKKGQELKMHKADIVRALATAIEGAEKCASVIHQLDLNKMRTRTRHSADLKYKLTVEELTLFCEEIDGLACVLPEGSAVKEVLRQTIELERLADSLLVGDPGSTPEKIRDMEQCVERGSALCIQLPKLTLISNRLQQERFLDEVKMHREEYDTLNLETIGRLLDQGIAIQPHYILETHLAALHKLKLQVEKWEERAKGVLSPSGDHQSLEEIDGLLKSADKIEAYLPTRQHLNTTYNNAKEWLNMVEEMQSKESYPYFSTLESVVKRGQAISISLYEKDMLGEALDSARVWKEKTSRTFLKKGWLLSLMEALSPRTDVLTGAKRCVIQPPPPPPTPQTGRGRHHHNTSSADRSAANNNNNSLNNASSGSNTTGNTASGARAWSPPPSTPEAEQFMKCFSEERSPTQIVAAFKAAEEREMANMRDLRSRNLRKDIRMPLHSVTYCYCLKRQYGVMTQCDLCKEWYHASCINALPAGEAEMPPGRFLCPGCVRTKRPRLEIILGLLVALQKLPVRLAEGEALQCLTERAMAWQDVARALLASKEAAKGLATIVQTENAQAGGRGDKCDKLGGDVQRGSGNKASRGGAMSPTHDTIHNRNSSASEHAYSASPPANVGSSQGGSGGITASAVRTLRLSPQLMHKLEDLMMEGDLLEVTMAETQQMWGLLRAARDQTSVWSERGALGALTDISGSNSSALNDSRESPVKRVGAATHQQQMKRARRTKEQQQQQMLMMMQQQGGAGTPGNNSANSANNAVLGNTTPSGAMNKSLTGKKMRKASPAAPRRASAPAPTITNYLNRKQQGVAGGSGLMMKKHFLAKQERRRRGMTTKQSTRGRRAGVHTKMKRGGGAGMNSGGPGRLLMSSPAGNAADTRNSSAAAEGGLLGRSASPQTDDDDSSRDASSNEDDEDCAASTCLRPTGKEVDWVQCDGGCEKWFHLHCVGLSKNSLKADEDYYCSICSNGVSGKKANKPRDTGNETAKTRGNERGTKEERTTKNSTKQTNANNKTETKRERLSLEAKRLAAESANNCSTTNIEAVGKKSTSDNLMCEEKMDKDEDTYASGDSRSKSKSLSSSKVVKDEEFNDGGDVKKMDVDDALTTTTQAKVLSTDSTSLVTSSDSVEMKDDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-