Amou040940.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383979.1:12615764-12645868[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.78 93 5.1 0.3 1 23 180 202 180 202 0.97 2 14 0.026 3.1 9.7 0.9 1 19 258 276 258 278 0.95 3 14 0.13 16 7.5 1.0 2 23 299 321 299 321 0.95 4 14 4.4 5.3e+02 2.7 3.1 2 15 360 373 359 379 0.81 5 14 7.1 8.4e+02 2.1 5.6 2 23 1035 1056 1035 1056 0.95 6 14 0.00044 0.053 15.3 0.9 2 23 1069 1090 1068 1090 0.96 7 14 1.1e-05 0.0013 20.3 5.3 1 23 1096 1118 1096 1118 0.98 8 14 0.022 2.6 10.0 3.9 1 23 1124 1147 1124 1147 0.95 9 14 0.036 4.3 9.3 2.7 2 23 1454 1475 1453 1475 0.95 10 14 0.88 1e+02 4.9 3.9 2 23 1606 1627 1606 1627 0.96 11 14 0.00077 0.092 14.5 0.8 2 23 1640 1661 1639 1661 0.96 12 14 1.5e-05 0.0018 19.9 5.3 1 23 1667 1689 1667 1689 0.98 13 14 0.083 9.9 8.1 1.2 2 23 1701 1723 1700 1723 0.97 14 14 6.6 7.8e+02 2.1 0.1 2 20 1731 1749 1730 1750 0.94
Sequence Information
- Coding Sequence
- ATGGCTGAGCCATGTAAAAAGAAGCCTAGGAAGTCAAAAATCGAGTTGAGGAAATGCAATGAGTTGGAAGATAAAGACGCAGTTGAACAGATGCAGGGCACAAGCCAAGAAGACCCATTGAAGATGTTACCAAAGCTCAAAAGTGCATTAGATGACAATAATGATAATTATACCAATAGTATATCAGGAACATCTAAAGTTGAATTTTCCATCCAAGTTGAAGTTGAAAATTGTGATGATGAAATCAGCCAGGATCGAGAAATGGAAGTAACAGATACAAATGATGATTTGTCACTGGACTTTCTACCAAACTTCGAAGTAATTATATCAAATGATGCAGTATTAGAAGAAGTTGACAAGCTTTATCATTCTAAAAACTATAGTGACCGAAAACTGGCAATTGGAGTGCGCAACATTTGGGGAAGGCACAAGAAGACAAAAAACATTTTGGATTACCATCAATCACTGGTACAAAATGTCTTACACGAGTGGAAGCTTTGGGCTACAAATTCAAAACTCCGGACTTCTATCTTTGCATACAAGTGTTACATTTGCAGTATTGGATTTTGGCACTTAGGTCCTTTTGAAGAACATATAAAGGTACACAGTGAGGTGACACTGAAACTAGAGCCCTTTCACCAAGAGTGCTGCATTGTGGCTGCACAAGGACAGTGGTTTGAGAAAATGTGCTTGTGCAAGGTTGAAGGTCCATGTCCTAAATGTTTGGCATCATTTGAAGAACACAGCACCCGGAGAAAAGGGACTTTGTGGTACCACTGTGATGGATGCAATATTACGTTTTCTACTTGTTGGGCTCTGTTCATGCACGAAGGGAATTGTATCCGTTTCGAGAAGCTGATGTATCAAAAAGTAAAACTGACAGATAACAAGGCGAAATGCAACATTTGTGATGTCGTATGTGTCACTGAAACCCGCTACCAGAACCATATTGACTCGTACCATACGGCAAGATCGGACATGCCACAGCAGTTCCCGACGATGAAGCCGTGCCCGATTTGTGGGTTAATGTATTATGTGCACAACCTGCACGATTGCCCGAGGAAAAAAGACAACCTTAAGTGCCAGCACTGCAAGCGACGCTTCCAGACAAAAGTGCTGTGTAAAATGCACGAACAATTCACTAAGAGTGACTGCTATTGCAAGATCTGCAAGAGGTATTTCAAAAAGCAGTGTATGGAGACGGAACACGTAATGAAACACAGTAAGAACTTCGTGGCGGTGTACAAATGTATGGAGTGCATGGACAACGTGCTATTGGCTGAGCAATCGCTCATGATCAAACACTGTGACGAGTGGCACAGGAAGCTCGACAAGAAGAAGGGATTGTATGACTCTATAATCGTGCCTCGGTCGTGTATGACCGCTGAGTGGTCGGAAGGAGTCACAGTCGAAGATATGATCATCACATCAGAAGCAGATAAGATTTATACGAAAAGCGTACGAGGAACCAACGCTACACCGAAAAAACCTGACGAAACGAACTCGCAAGACAAAGCAGCCAGTCTGCCAGAAATAATCCAAAGAAAAAAAGAAGACATCGAGGAATACTACAAAAACAAAGAAGAAATCAACAAAATATGCGCTGGTTTGAGAAATAAAATGCTCGAGCGAGCTAAGAATATCATAGAACCGGTTGACATCAACGCGGTAAAACAAGAAGACAAAGGCAAACCAGATATCGAAGAGGATAATGATGAAGTTTTTATCGTTGAAGATGTTAAAGAAGAAATTGACGTCGACGATGATGATGCTATCAGTGAAATGCAGAATTCTGTTGACGCGCTTCTCAATATAGGAAAAGTAAAAGAAGGAATTGATATCGAAGAACATTTGGATTATGTAAATAATTCGCGAAATAACCTAAGTAATTCACAAGAGGTTTCACAGGAACGTAATCTGCAAGCCTCTAATATTGACTTGGCACTTGTAAAAACAGAACCTGAATTAGAAATTACACGTGAAGAAAATTTTATTGAAATTGTCGACGACAAAGACGACCTTATTTATGATTATAACACAAATATTGACTTGTCTTTTGTTAAAAAAGAAGATAATTTAACACTTACATATGAGGAAGATGTAATTAAAATTGATGATGACAAAGACGATATTTTTTATGACAAAAATGTCATTATTGATGGCATTGTTAATGTCAAAGATGAAATTATCAGTTTATGTAATCATCAAGATGAAGCAATAAACATTGTTAAAGCAGGACCTGAATTAGAACCACACATTGACGAAGACGTGATTGAAATTGTTGATGAGAAATGTGAAGACGGAATTGAAATCAGTGATGACGAAGATGAAAATGTCAAGGAGAATGATAGTGATGTGAAAAAATTTATTGCTGTCAAACAAGAAAAAAATTATGCTAAAGATGACATTGATATAGTTGATAAAAACTTTGAAAACTCTGAAACAGAAAGCAAGAATGAAATGAACCGAGAAGAATGCTTAGAAGAAATAACCAAAGTTTTGAAAGCGCCAAAGAACACAAAGTCTATAGAACTGACAGGCATCAGGCTCGAAGACGTTAGTATAAAAGAAGAACCAATCGATGACGACTGTGAAAATGACATTATTAGAATTAGTTTGGGAAAAGCACCAGAGTTTCACGTCACAGCTTCTGCGGAAAATGTTAAATCTGAGAAAAGTGACGTATCGATATCAGACATGTCCAGAGAAATCGGTTCGGACGTCGATATGGCGATAATCAGTATTAAACAACAACCAAGCAAAAAAAATGAGAAAGGAAACAAATCTCCACAAAAAACCAAAAAAATTTACCGCTGCAAGAAGAAGATTCAAGTACTGAATGAAACGTCGGATGTTACTTCGAAAACGTCGTGCTGGTATCAGTGTAAGGATTGTTCAGAAAAAGTGGAATTCGGGGATATTTTTTTTCATTGGGAGGCACATTTTGAGTTGCCCGAGGTAAATAATGATGATAAATTGGTGATAGATGAACAGAATTTGGTACATGATAAGAATTTCACTGTTGATGACGTTTTGCCGGATCAAATCAAGAAAGTCTTAGTCCAGATGTTGCAACCTGAAGAGAGCGACAGAAGTTTGAGGAAGTGTGTGATGTGCGATCGCAAATTCATGCGCCGTAACGAATGCAAACATCATCTTATCGAACACCTTCTGCGCGACGCCTCCGTGAGGCACCCTCCGATCAGTTGCCAACTCTGCAAGGAGCGCTTTACTAAGGCGGGCGAATATCGCAGTCACATGCGCAACCATGCTGCCCTGCCTATGTTCCGGTGTGAAATGTGCAACAAATGTTTCTCCAGCTCAAGCAACTTCGCCAAACACAAGAAGATTCACAACGTTTCTGAATTATTTTCATGTGACATCTGCAGTAAGAAGTTCCACAAAAAATTTGGTATCAAAAGACATATGGAGctctatcataaaaatAAAGACGACACTGTTTATAACAAAAATTACACAATTGTAAGCAAGGATTATAACACAAATATTGACTTGTCTATTGTCAAAACAGAAGATGATTTAACACTCACAATTGAGGAAAATGAAATTATAATGGATGATGACAAAGACGACATTGTTTATGACAAAAATGACATTATTGATAGCAAGGATGGCATTGTAAATAATATTGTTAAAGCAGAACCTGAATTAGAACCACACAATGACGAAGACGTGATTGAAATTGTTGATGAGAAATGTGAAGACGGAATTGAAATTAGTGATGACGAAGATGAAAATGTCAAAGAGAATGATAGTGATGTGAACAAAATGTTTGCTGTTAAACAAGAAAAAAAATATGCTAAAGATGTCATTGATATAATTGATAAAAACTTTGACAACTCTGATACAGAAAGCGAAACTGAAGTTGACCATGAAGCATGCTTAGAAGAAATATCCAAAGTTTTCAAAGCGCCAAAGAACACAAAGTCTATAGAACTGACAGGCATCAGGCTCAAAGACGTTAAAATAAAAGAAGAACCAATCGATGACGACGATGAAGATGACATTATTAGGCTTTGTTTGGGAAAAACACCAGAGTTTGACGTCACAGTTTCTGCGGAAAATGTAAAATCTGAAAAAAGTGACGTATCGACATCAGACATGTCCAGAGAAATCGGTTCGGATGTCGATATGGCTCAATTAGAACCTAAAATCAGTATTAAACAACAACCAAGCAAAAAAAATGTGAAGGGAAACAAATCTTCACAAAAAAACAAAAAAATTTACCGCTGCATGAAGTGTCAATTCGTAGGCCTACACAAAGAATATAGAATTCACAAAAGTCACTGCCGGAAACCTAGATCCTATGAGCAGAAGAATTTCGTTTGGACCAATATAAGTTGCACAAAATGCAACAAGTTTTTCGAAGACTTATCATCATATTTCTACCACTTTACCAAACATAACCTAAAACATGGCGTATGCCCGGTTTGCTTCAAACACATACCAACATCCGATATTTTCTTAGTCAAAAGACATTTGGAATGTCATATTAAAAAGATGTTCAGGAAGATGCAAGTACTGAATGAAACGTCGTGTGTTTCTTCGAAAACGTCAGGCTTTTATCAGTGTAATGTTTGTTCGGAAAAAGTGAAACTCGGGGATTTTTTTTGTCATTGGGAGGCACATTTTAAGTTACCCGAGGTAGATAATGATGATGAAGATAAATTGGTGATAGATGAACAGAATTCAGTAGATAATAAGAATTTCACCGTTGACGACGTTTTGCCGAATCAAATCAAGAAAGTCGTAGCCCAGATGTTGCTAACTGAAGGGACCAACAGAGGTTTGAGGAAGTGTGTGATGTGCGATCGCAAGTTCATGCGCCGGAACGACTGCAAGCGTCATCTTATTGAGCATTTACTGCGCGACGCCTCCGTGAGGCACCCTCCGATCAGTTGCCAACTCTGCAAGGAGCGTTTTAGAAAGCCGGACGAATATCGCGGTCACATGCGCAACCATGCTGCCCTGCCTATGTTCCGGTGTGAAATGTGCAAGAAATGTTTCTCCGACTCGAGCAACTTCGCCAAACACAAGAAGGTTCACAACGTTTCTATGCACCTCACGACGGAGCCCATACAGTGTCCACGGTGTGACAAGTTGTTCTACGAGAGGTCTATATACAAGAAACACGTAAAGACGCGTCACGACAAGCCACCCTTTACAAAGCGGTGTAACTTGTGCCGCGCAGTGTTCGACAAAATGAAGACCATGTGGGATCACATGTGGGAGATACATCGAGAGAGGCGGGTGAAGGCAGACTGTCCGTTATGTAGCAAGTACGTTGCCGCAGACTCCTTGGATATTTAA
- Protein Sequence
- MAEPCKKKPRKSKIELRKCNELEDKDAVEQMQGTSQEDPLKMLPKLKSALDDNNDNYTNSISGTSKVEFSIQVEVENCDDEISQDREMEVTDTNDDLSLDFLPNFEVIISNDAVLEEVDKLYHSKNYSDRKLAIGVRNIWGRHKKTKNILDYHQSLVQNVLHEWKLWATNSKLRTSIFAYKCYICSIGFWHLGPFEEHIKVHSEVTLKLEPFHQECCIVAAQGQWFEKMCLCKVEGPCPKCLASFEEHSTRRKGTLWYHCDGCNITFSTCWALFMHEGNCIRFEKLMYQKVKLTDNKAKCNICDVVCVTETRYQNHIDSYHTARSDMPQQFPTMKPCPICGLMYYVHNLHDCPRKKDNLKCQHCKRRFQTKVLCKMHEQFTKSDCYCKICKRYFKKQCMETEHVMKHSKNFVAVYKCMECMDNVLLAEQSLMIKHCDEWHRKLDKKKGLYDSIIVPRSCMTAEWSEGVTVEDMIITSEADKIYTKSVRGTNATPKKPDETNSQDKAASLPEIIQRKKEDIEEYYKNKEEINKICAGLRNKMLERAKNIIEPVDINAVKQEDKGKPDIEEDNDEVFIVEDVKEEIDVDDDDAISEMQNSVDALLNIGKVKEGIDIEEHLDYVNNSRNNLSNSQEVSQERNLQASNIDLALVKTEPELEITREENFIEIVDDKDDLIYDYNTNIDLSFVKKEDNLTLTYEEDVIKIDDDKDDIFYDKNVIIDGIVNVKDEIISLCNHQDEAINIVKAGPELEPHIDEDVIEIVDEKCEDGIEISDDEDENVKENDSDVKKFIAVKQEKNYAKDDIDIVDKNFENSETESKNEMNREECLEEITKVLKAPKNTKSIELTGIRLEDVSIKEEPIDDDCENDIIRISLGKAPEFHVTASAENVKSEKSDVSISDMSREIGSDVDMAIISIKQQPSKKNEKGNKSPQKTKKIYRCKKKIQVLNETSDVTSKTSCWYQCKDCSEKVEFGDIFFHWEAHFELPEVNNDDKLVIDEQNLVHDKNFTVDDVLPDQIKKVLVQMLQPEESDRSLRKCVMCDRKFMRRNECKHHLIEHLLRDASVRHPPISCQLCKERFTKAGEYRSHMRNHAALPMFRCEMCNKCFSSSSNFAKHKKIHNVSELFSCDICSKKFHKKFGIKRHMELYHKNKDDTVYNKNYTIVSKDYNTNIDLSIVKTEDDLTLTIEENEIIMDDDKDDIVYDKNDIIDSKDGIVNNIVKAEPELEPHNDEDVIEIVDEKCEDGIEISDDEDENVKENDSDVNKMFAVKQEKKYAKDVIDIIDKNFDNSDTESETEVDHEACLEEISKVFKAPKNTKSIELTGIRLKDVKIKEEPIDDDDEDDIIRLCLGKTPEFDVTVSAENVKSEKSDVSTSDMSREIGSDVDMAQLEPKISIKQQPSKKNVKGNKSSQKNKKIYRCMKCQFVGLHKEYRIHKSHCRKPRSYEQKNFVWTNISCTKCNKFFEDLSSYFYHFTKHNLKHGVCPVCFKHIPTSDIFLVKRHLECHIKKMFRKMQVLNETSCVSSKTSGFYQCNVCSEKVKLGDFFCHWEAHFKLPEVDNDDEDKLVIDEQNSVDNKNFTVDDVLPNQIKKVVAQMLLTEGTNRGLRKCVMCDRKFMRRNDCKRHLIEHLLRDASVRHPPISCQLCKERFRKPDEYRGHMRNHAALPMFRCEMCKKCFSDSSNFAKHKKVHNVSMHLTTEPIQCPRCDKLFYERSIYKKHVKTRHDKPPFTKRCNLCRAVFDKMKTMWDHMWEIHRERRVKADCPLCSKYVAADSLDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -