Amou040929.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383979.1:12508664-12537172[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.024 2.8 9.8 2.4 1 23 471 493 471 493 0.96 2 14 6 7.2e+02 2.3 0.3 1 12 543 553 543 564 0.70 3 14 2 2.4e+02 3.8 4.9 2 23 618 639 618 639 0.77 4 14 0.0014 0.16 13.7 0.4 2 23 652 673 651 673 0.96 5 14 0.00011 0.013 17.2 8.1 1 23 679 701 679 701 0.98 6 14 0.02 2.4 10.1 5.5 1 23 707 730 707 730 0.95 7 14 0.023 2.7 9.9 2.9 2 23 991 1012 990 1012 0.95 8 14 0.056 6.7 8.7 1.4 2 23 1143 1164 1143 1164 0.95 9 14 0.00097 0.12 14.2 0.6 2 23 1177 1198 1176 1198 0.96 10 14 1e-05 0.0012 20.4 6.5 1 23 1204 1226 1204 1226 0.98 11 14 0.014 1.6 10.6 4.1 1 23 1232 1254 1232 1254 0.98 12 14 0.0012 0.15 13.9 0.5 2 22 1261 1281 1260 1281 0.95 13 14 0.068 8.1 8.4 0.2 2 20 1283 1301 1282 1303 0.97 14 14 0.00056 0.067 15.0 0.9 3 23 1314 1335 1313 1335 0.97
Sequence Information
- Coding Sequence
- ATGTTACAACACTTGTTACAGATAATCGTGCCTCGGTCGTGTATGACCGCTGAGTGGTCGGATGGAGTCACAGTCGAAGATATGATCATCACGTCAGAAGCAGATAAGATTTATACGAAAAGCGTACGAGGAACCAACGCTACACCGAAAAAACCTGACGAAACGAACTCTCTAGACAAAGCCGCCAGTCTGCCAGAAATAATCCAAAGAAAAAAAGAAGACATCGAGGAATATTACAAAAAGAAAGAAGAAATCAACAAAATATGCGCTGGTTTGAGAAACAAAACGCACGAGCGAGCTAAGAATATCATAGAAACGGTTGATAACAACGCAGTAAAACAAGAAGACAAAGGCCAACCAGATATTGAAGACGATAATGATGAAGTTGTTCTCGTTGAAGATGTTAAAGAAGAAATTGGCGTCGATGATGATGCTATCAGTGAAATGCAGAATTCTGTTGACGAGCTTCTCAATATAACAAAAGTAAAAGAAGAAATTAATATTGAAGAACATCTGGATTATGTAAATAATTCGCAAAATAACCTAAGTAATTCACAAGAGGTTTCACAGGAACGTAATCTGCTAGCCACTAATATTGACTTTGTAATTGTAAGGACAGAACCTGAATTAGAAATTACACCTGAAGAAAATTTTATTGAAATTGTCGACGACAAAGACGACATTATTTATGACATACATAACATTATTGAAAGCAAGGTTGATAACAACAATATTAACTTGGATATTGTAAAAACAGAACCTGAATTAGAACCTAGATATGAGGAAGATGCAATTGAAATTGACGATGACACAGACGACATTGTTTATGACAAGCAAGGAAGAGATGAGAAAAACTGTACTCGTAATATGAAAAGCAAGGATGATAACACCAAAATTGACTTGCCTGTAAATACTAAAGATGATTTAACACTTACATATGAGGAAGATGTAATTAAAATTGATGATGACAAAGACGACATTTTTTATGACAAAAATGTCATTATTGATGGCAAGGATGCCATTGTTAATGTCAAAGATGAAATTATCAGTTTATGTAATCATCAAGATGAAGCAATAAACATTGACTTGAATATTGTTAAAGCAGGACCTGAATTAGAACCACACATTGAAAATGACATTATTAGACTTAGTTTGGGAAAAGCACCAGGGTTTCACGTCACAGCTTCTGAGAAAAGTGACGTATCGATATCGGACATGTCCAGAGAAATCGGTTCGGACGTCGATATGGCTCAATTAGAATTTCAAATCAGTATTAAACAACAAAAGAGCAATGTGAAAGAAAAAAAATCACCACAAAAAAACAATAAAATTTACCGCTGCGAGACGTGTCAATTCTTAGGCCTACACAAAGAATATGTAATGCACAAAATGAACTGTGTTCGGAAGAAATTTACTTGCACAAAATGCAACATAGTTTTCGAAGACCTATCATTATATTTCTACCATTTTACCAAACACAACCTAAAATATGGCGTATGCCCGGTTTGTTTCGAACATTTGCAAACATCCTGCAAAAGACATTTTACATGTCATATTCAAATGATGTTCAGGAAGATTCAAGTATTGAATGAATCGTCGGATGTGCCTTCGAAAACATCGTGCTGGTATCAGTGTAACGATTGTTCAGAAAAAGTGGAATTCGGGGATTTATTTTATCATTGGGAGGCACATTTTAAGATACCCGAGGTAAATAATGATGACAAATTGGTGACAGATGAACAGAATTCGGTACATAATAAGAATTTCACTTTTGATGACGTTTTGCCGGATCAAATCAAGAAAGTCTTATCCCAGATGTTGCTAAATGTAGGGACCCTCAGATGTTTTAGGAAGTGTGTGATGTGCGATCGCAAGTTCACGCGCATGAACGCCTGCAAGCATCATCTTATTGAGCATTTACTGCGCGACGCCTCCGTGAGGCACCCTCCGATCAGTTGCCAACTCTGCAAGGAGCGCTTTACTAAGCCTGGTGAATATCGCGGTCACATGCGCGACCATGCTGCCCTGCCTATGTTCCGGTGTGAAATGTGCAAGAAATGTTTCTCCAGCTCGAGCCACTTCGCCAAACACAAGAAGGTTCACAACGTTTCTGCATTGTTTTCATGTGACATCTGCAGTAAGAAGTTCCACAAAAAACATGGTATCAAAAGACATATGGAGCTCTATCATAAAAACAAAGACGACATTGTTTATGACCAAAATTCCACAATTGTAAGCAAGGATTATAACACAAATATTGAATTGTTTATTGTAAAAACAGAAGATGATTTAACACTTACATTTGAGGAAGATGAAATTGAAATGGATGATGACAAAGACGACATTGTTTATGACAAAAATGACATTATTGATAGCAAGGATGGCATTGTACATAATATTGTTAAAGCAGGACCTGAATTAGAACCACACAATGACGAAGACGTTATTGAAATTGTTGATGAGAAATGTGAAGATGGAATTGAAATTAGTGATGACAACTCTGAAACAGAAAGCGAAACTGAAATGAACCGTAGGGCATGCTTAGAAGAAGTAAACAAAGTTTTTAAAGCGACAGGCATCAGACTCGAGGACGTTAGTATAAAAGAAGAACCAATCGATGACGACAATGAAGATGACATTATTAGGCTTCGTTTGGGAAAAACACCAGAGGTTGACGTCACAGTTTCTGCGGAAAATGTTAAATCTGAAAAAAGTGACGTATCGACATCAGACATGTCCAGAGAAATCGGTTCGGATGTCGATATGGCTCAATTAGAACCTAAAATCAGTATTAAACAACAACCAAGCAAAAAAAATGTGAAGGGAAACAAATCTTCACAAAAGAACAAAAAAATTTACCGCTGCAAGAAGTGTCTATTCGTAGGCCTACGCGAAGAATATAGAATGCACCTAGGTCCCTGCCGCTATCGTAGATACTATGAGCAGAAGAATTTCGTTTGGACCAATATAACTTGCACAAAATGTAACAAGTTTTTCGAAGACTTGTCATCATATTTCTACCATTTTACCAAACATAACCTAAAACATGGCGTATGCCCGGTTTGCTTCAAACACATACCAACATCCGATATTTTCTTAGTCAAAAGACATTTGGAATGTCATATTAAAAAGATGTTCAGGAAGATGCAAGTACTGACTGAAACGTCGTGTGTTTCTTCGAAAACGTCAGGCTTGTATCAGTGTAATGTTTGTTCGGAAAAAGTGAAACTCGGGGATTTTTTTTGTCATTGGGAGGCACATTTTAAGTTACCCGAGGTAGATAATGATGATGAAGATAAATTGGTGGTAGATGAACAGATTTCGGTAGATAATAAGAATTTCACTGTTGACGACGCTTTGCCGGATCAAATCAAGAAAGTCTTAGCCCAGATGTTGCTAAATGAAGGGACCATCAGATGTTTTAGGAAGTGTGTGATGTGCGATCGCAAGTTCAGGCGCCGGAACGAAGGCAAGCGTCATCTTATTGAGCATTTACTGCGCGACGCCTCCGTGAGGCACCCTCCGATTAGTTGCCAACTCTGCAAGGAGCGTTTTAGAAAGCCGGACGAATATCGCGGTCACATGCGCGACCATGCTGCCCTGCCTATGTTCCGGTGTGAAATGTGCAAGAAATGTTTTTCCGACTCGAGCAACTTCACCAAACACAAGAAGGTTCACAAAATTTCTGGATTATTTGAATGTGACACCTGCAGTAAAAAGTTTCATTCAAAACGTCGTATCGAAAGACATATACAGATGCACCTCACGACGAAGCCCATACAGTGTCCGCAGTGTGACAAATTGTTCTATGAGAGGTCTTCATACAAGAGACACGTAAAGACTAAACGATGTAACTTGTGCCGCGTAGAGTTCGACAAAAAGTCGACCTTGTGGGATCACATGTGGGAGATACATCGAGAGAGTCGGGTGAAGGCAGACTGTCCGTTATGTAGCAAATCTTTCCGCAAAATCCAGGATGTGCGGAATCATATACGTACGTTCCACAACACGTCGGTGTCCTTCATCAGGAAAGGTACTTCGAGCATGCAGGCTGACGACGTGAAGAAATTTATCAATGAAAAAGATATAATTCAGATAAAAACCGCACGTGAAAAGGAAACTTTGGTCGTGTTTTGA
- Protein Sequence
- MLQHLLQIIVPRSCMTAEWSDGVTVEDMIITSEADKIYTKSVRGTNATPKKPDETNSLDKAASLPEIIQRKKEDIEEYYKKKEEINKICAGLRNKTHERAKNIIETVDNNAVKQEDKGQPDIEDDNDEVVLVEDVKEEIGVDDDAISEMQNSVDELLNITKVKEEINIEEHLDYVNNSQNNLSNSQEVSQERNLLATNIDFVIVRTEPELEITPEENFIEIVDDKDDIIYDIHNIIESKVDNNNINLDIVKTEPELEPRYEEDAIEIDDDTDDIVYDKQGRDEKNCTRNMKSKDDNTKIDLPVNTKDDLTLTYEEDVIKIDDDKDDIFYDKNVIIDGKDAIVNVKDEIISLCNHQDEAINIDLNIVKAGPELEPHIENDIIRLSLGKAPGFHVTASEKSDVSISDMSREIGSDVDMAQLEFQISIKQQKSNVKEKKSPQKNNKIYRCETCQFLGLHKEYVMHKMNCVRKKFTCTKCNIVFEDLSLYFYHFTKHNLKYGVCPVCFEHLQTSCKRHFTCHIQMMFRKIQVLNESSDVPSKTSCWYQCNDCSEKVEFGDLFYHWEAHFKIPEVNNDDKLVTDEQNSVHNKNFTFDDVLPDQIKKVLSQMLLNVGTLRCFRKCVMCDRKFTRMNACKHHLIEHLLRDASVRHPPISCQLCKERFTKPGEYRGHMRDHAALPMFRCEMCKKCFSSSSHFAKHKKVHNVSALFSCDICSKKFHKKHGIKRHMELYHKNKDDIVYDQNSTIVSKDYNTNIELFIVKTEDDLTLTFEEDEIEMDDDKDDIVYDKNDIIDSKDGIVHNIVKAGPELEPHNDEDVIEIVDEKCEDGIEISDDNSETESETEMNRRACLEEVNKVFKATGIRLEDVSIKEEPIDDDNEDDIIRLRLGKTPEVDVTVSAENVKSEKSDVSTSDMSREIGSDVDMAQLEPKISIKQQPSKKNVKGNKSSQKNKKIYRCKKCLFVGLREEYRMHLGPCRYRRYYEQKNFVWTNITCTKCNKFFEDLSSYFYHFTKHNLKHGVCPVCFKHIPTSDIFLVKRHLECHIKKMFRKMQVLTETSCVSSKTSGLYQCNVCSEKVKLGDFFCHWEAHFKLPEVDNDDEDKLVVDEQISVDNKNFTVDDALPDQIKKVLAQMLLNEGTIRCFRKCVMCDRKFRRRNEGKRHLIEHLLRDASVRHPPISCQLCKERFRKPDEYRGHMRDHAALPMFRCEMCKKCFSDSSNFTKHKKVHKISGLFECDTCSKKFHSKRRIERHIQMHLTTKPIQCPQCDKLFYERSSYKRHVKTKRCNLCRVEFDKKSTLWDHMWEIHRESRVKADCPLCSKSFRKIQDVRNHIRTFHNTSVSFIRKGTSSMQADDVKKFINEKDIIQIKTAREKETLVVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -