Amou027184.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- Bcl11a_2
- Assembly
- GCA_947532105.1
- Location
- OX383972.1:23550666-23574006[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.017 2.1 10.3 0.3 1 23 135 158 135 158 0.96 2 13 0.38 45 6.1 0.2 2 20 164 182 163 184 0.89 3 13 0.84 1e+02 5.0 0.8 2 21 302 321 301 322 0.91 4 13 0.00038 0.045 15.5 1.1 2 23 365 386 364 386 0.94 5 13 2.3 2.7e+02 3.6 0.0 1 16 392 407 392 408 0.88 6 13 5.9 7e+02 2.3 0.1 1 16 448 463 448 465 0.87 7 13 6.9 8.3e+02 2.1 0.0 5 19 471 485 470 487 0.92 8 13 1 1.2e+02 4.7 0.0 1 16 491 506 491 508 0.89 9 13 7.3 8.6e+02 2.0 0.2 1 16 534 549 534 550 0.87 10 13 0.0021 0.25 13.2 0.1 1 23 562 585 562 585 0.97 11 13 0.00014 0.016 16.9 4.8 1 23 590 612 590 612 0.98 12 13 4.4e-05 0.0052 18.4 0.5 1 23 618 641 618 641 0.95 13 13 0.0011 0.13 14.1 2.3 2 23 649 671 648 671 0.93
Sequence Information
- Coding Sequence
- ATGACGGAACCTGTGGATGATGATGAGGAAATGTTTGTGATTATAGTAGAAGATGAAAATGATGATAATCTAAAAAGTAGTGACAACTACGATGAAGTAAATGAAGAGTCCAAGGACCATGCTATGTCCGATAGCGATGAAACTTACGTCGAAGAAATAGAAAGTCCGGAAGAAGAAAGTCATGATGATGAAGAGGTTTCCAAAAAACGTACCACTGAAAAACGCAGGGCTAGGTTGTTACTACCGTTTGAACAGGAGTCATTGGTAAAAAGACTTCGGGATGAGAACTTTGAATTAGCAGAGAATGAACATCAACTAGTGGCAGCTTTAGCTGAAATTATGAACAATACGAAGTCTCCATCACCTCCTGATGACTTTGTGTATGAAAATGACTTTAATAAGTTTGTGTGTGCTACTTGTGGGTTGGAGTATCGAACTAAAATAACTGCTAAGCGTCACTGGCTAAAACTACATGGTCCACGATACTGCATCTGCTACGCTTGTGGAGCTGACTTTAGAGACATATCTAGCCTGTATAGGCATGAGTTGCGATGTAATTCTCCTGATGCAAAAGTTGTATTGAAAGCGAGGGCTCTCACATATGAACAGAAGAATACTGCCCCTGGCCGACAAAAAAATTTAGCGTATATGGCTGATGAGTACAGGAAGACCAATTCCATTGTCCATCAGCTGCGAGAACAAAATCCTGAACTAGCGGATAATGAAGAAGAGCTGGTAAAGAAGATAAAGAAATTGATCTCGTTTGTGACGCCACCAGATCCACCACCAGATTTTTATGAGAGGAATGGATCTGCTTTTGAGTGCAAAACGTGTCGGGCGACGAAGGAGTCTCTTATCACTGTAACTCGGCATTGGCAGGAGCAGCACGGGCCGCGGTATTTGAAGTGTCTTGCGTGTGGGTGGAAATTCAGATGCCCTGGGACCCTGTACAAACATGAGAGGCGTTGCAATGCGCCGGACGCCCGTATAGTATTGCTGGCACGTTCTAGGATCCTCAATATCCGTCGTCTACAAAAGAGGAGTGGAAATGACGGGCAAGGTGGAAGAGACGGGCAAGGTGGAAAGGAGTTATGTTGTTTTTTCTGCGGTGCCGCGTTCAATACCCGCAGCTCCCTGCAAGCGCACGAGCGAGCTCACACGGGAGAGAGGCCCTACCGTTGCCAGCTGTGCCCGGCCGCTTACACCTCCGCTGCGGGCCTCTATCTGTCCCCGGCCGTTTACACCTCCGCTGCGGGCCTGTCTGTAAGTTTGTTAAGTTGGTACTGCTGTGCCGCGTTCAGTAGCCACGCTTTCTTATTAGCTCACGCGGGAGAGACGCTCTACTGTTGCCAGCTGTGCCCGGCCGCTTACACCTCCGCTGCGGGCCTCTATGTAAGTTTGTTAAGTTGGTACTGCTCTGCCGCGTTCACTAGCCCCGCGTTCTTATTAGCTCACGTGGGAGAGACGCTCTACCGTTGCCAGCTGTGCCCGGCCGTTTACACCTCCGCTGCGGGCCTGTCTGTAAGTTTGTTAAGTTGGTACTGCTGTGCCGCGTTCTGTAGCCACGCGTTCTTATTAGCTCACGCGGGAGAGACGCTCTACTGTTGCCAGCTGTGCCCGGCCGCTTACACCTCCGCTGCGGGCCTCTATCTCACGAGCGAGCTCACACGCCGGGAGAGACCCTACCGATGTCAGCTGTGCCCGGCCGCTTACACCTCCGCTGCGGGCCTCTATCGTCACAAAAATAGTGAACATACAGACGAAACATTCATGTGCGATAAATGCGAACAGACTTTCAAATCCAAGGAGTGTCTGAGGTCGCATGTTCGAAGGCATTTACCAACCTCTAAGCACAAGTGCTCGGAGTGCGGGCGAGTGTACGCTCAGAAGACGGCGCTGCGGATACACGTGGACCGCGACCACCGACACCTGCCGCCGCCCTGCGCCTGCCAGATGTGTCCCAAGAGGTACCCTAAGATGTCGCTGTTGAAAAAGCATATGCAAGAAAAACATGGGATGACTTTGATGACTCGCAATATGTTTTACAGACAACTACCTCACCTATCGGATACTGATATTCGTAAAATTGTCTCTAAAGTGGATGTAGAGGTAACTGTAGCAACTGAACAGACGCACCAAGAAGAAAATAAAAGTAAGCCTGCATATGAAGAAACGCACCAAGAAGAACATGAAAGTAAGCCTGAGTATGAAGAAATATCAATAGACGAAGAACCAATTCCATCAGAAGATATGATAAAATATGAAGAAAATGCTGAAATAAAACCTAAACTTGAAGATAATAAGGAACTTTTAGAATATATAAAAGAAGTTAAGAAAACAAGAGATAAAACCAACAAACCTTCAGATAAACCTTTTGTTGTCATAAAAGATCAAAAAGCTGTATTTGTTGATGGAAGTAACTTAGAATTTTATGAACAAAATGCAGCTTACCAGAATATGCCTAAAGATGAAAACAAAGTACGAGTGAAGCAAGAAAAAGCTCCAGATATAAGTGTCAATAATCTGAAGGCCACTGAAGCGTTTCAAGGTGAAATAATATCTCAAAATAACAAAGTGGTAGCTCTAAAAAATTTTAGAAGCCCTAAACCGCAGACCGGCCCTAAGCCGCAGCCCGCAACTACAAGCCCAAAGACCAAAAAGAAATTGTCAAAACGAAAGCGAAGATACTAA
- Protein Sequence
- MTEPVDDDEEMFVIIVEDENDDNLKSSDNYDEVNEESKDHAMSDSDETYVEEIESPEEESHDDEEVSKKRTTEKRRARLLLPFEQESLVKRLRDENFELAENEHQLVAALAEIMNNTKSPSPPDDFVYENDFNKFVCATCGLEYRTKITAKRHWLKLHGPRYCICYACGADFRDISSLYRHELRCNSPDAKVVLKARALTYEQKNTAPGRQKNLAYMADEYRKTNSIVHQLREQNPELADNEEELVKKIKKLISFVTPPDPPPDFYERNGSAFECKTCRATKESLITVTRHWQEQHGPRYLKCLACGWKFRCPGTLYKHERRCNAPDARIVLLARSRILNIRRLQKRSGNDGQGGRDGQGGKELCCFFCGAAFNTRSSLQAHERAHTGERPYRCQLCPAAYTSAAGLYLSPAVYTSAAGLSVSLLSWYCCAAFSSHAFLLAHAGETLYCCQLCPAAYTSAAGLYVSLLSWYCSAAFTSPAFLLAHVGETLYRCQLCPAVYTSAAGLSVSLLSWYCCAAFCSHAFLLAHAGETLYCCQLCPAAYTSAAGLYLTSELTRRERPYRCQLCPAAYTSAAGLYRHKNSEHTDETFMCDKCEQTFKSKECLRSHVRRHLPTSKHKCSECGRVYAQKTALRIHVDRDHRHLPPPCACQMCPKRYPKMSLLKKHMQEKHGMTLMTRNMFYRQLPHLSDTDIRKIVSKVDVEVTVATEQTHQEENKSKPAYEETHQEEHESKPEYEEISIDEEPIPSEDMIKYEENAEIKPKLEDNKELLEYIKEVKKTRDKTNKPSDKPFVVIKDQKAVFVDGSNLEFYEQNAAYQNMPKDENKVRVKQEKAPDISVNNLKATEAFQGEIISQNNKVVALKNFRSPKPQTGPKPQPATTSPKTKKKLSKRKRRY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -