Amou012890.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383985.1:827430-848281[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.87 1e+02 4.9 4.2 2 23 564 586 563 586 0.92 2 13 0.016 1.9 10.4 0.7 1 23 592 614 592 614 0.99 3 13 0.039 4.6 9.2 0.6 2 15 621 634 620 640 0.83 4 13 0.47 56 5.8 0.1 3 20 650 667 649 669 0.92 5 13 0.21 25 6.9 0.2 3 23 704 725 704 725 0.95 6 13 0.00086 0.1 14.4 1.4 1 23 759 781 759 781 0.97 7 13 2 2.4e+02 3.8 0.1 3 20 789 806 788 808 0.88 8 13 0.00092 0.11 14.3 5.3 2 23 824 845 823 845 0.96 9 13 0.78 93 5.1 7.1 3 21 855 873 853 875 0.93 10 13 0.067 8 8.4 1.8 1 23 880 902 880 902 0.97 11 13 4.3e-06 0.00051 21.6 0.8 1 23 906 929 906 929 0.97 12 13 4.9e-05 0.0058 18.3 3.4 1 23 938 960 938 960 0.98 13 13 0.00017 0.021 16.6 1.2 1 23 966 989 966 989 0.96
Sequence Information
- Coding Sequence
- ATGAGTCACCTTACTGGGGGACCTTCTCAAGAGGAGACGATGGCTAAAAACTTGACGAACTCCACCATCTGCCAGGGGGGCAAAATGCTGGATGCGCGGTTTGCCGGTCTGGAGGATCGACTGCTGCCTGCAAGGGTCTGTCGATCTCCATTGGTGGCTGACAAGAGGACTTTGGTGGCCTCTAAGATTACTGAAAATCAGCCGTCAGCTGGTGCAGGGTCAGTACCGGTTACTGTTGGCTCTGCTGCCTCATTAAAGAAGCCAACGAAAAAACCAAGGGGTGATGCTGCCTCAGCCACACCGGCTGATGAGGGTTGGCAGACAGCCGGTACCAGACGCGCGAAGAGGAGGAAGAATGCAGCTCAGTCTGCTCCTTCTGGTCCTCCACCTCCTCCGAAAAAGGTGGATAAGACAAAAAAGGGGTCGGGCGTTGCTGCTGCTGCTGCTCCAATACATAATCCTGGATCTTCTATTGCCAGGAGTCACTGTAGATTCTGTGCGCAAGTAAAAAACTACATAGACTTGCTTGATGTCGCTACCGATGAGGAAGCTAAAAAACAGTTGATAACAATGTTAAATTTCTTTAAAATCGATTTCGTTGATTTATTGAACTCAGAAATACCAGGAACCACATGCCGAGCATGTTATGATGAGATTCTCAAAAGTTACATCTTTTTTCTGAAGGTAAAAGTTTCTCAGAATATATTAAAACAATTGTACAGTAAGGATAACGGCAGAAATTATAAAATATATATAAAATCTGAACCTGTTGACTGTGTAGATACAGTTGTCGTTAGCAAGTATGTTGAAAAAGAAAAACTTGAAAGTAACACTAACATAGATCACCATTCATATAGTTTACCAAGCATGTACAATGTAGAAACAAGAAATTCTAAAGCAGAACAGAAACTCTGTGTTCCAATACAAGCACAAACTGCTCATGAAATAAAAAAGAACAATAATTCTAATCAAAAAGAAAAACTTGAAAGTAACACTAACATAGATCACCATTCATATAGTTTACCAAGCTCGTCCAATGTAGAGACAAGAAATTCTAAAGCAGAACAGAAACTCTGTGTTCCAATACAAGCACAAACTGCTCATGAAATAAAAAAGAACAATAATTATAATCAAAAAGAAAAACTTGAAAGTAACACTAATATAGATCACCATTCATATAGTTTACCAAGCTCGTCCAATGTAGAGACAAGAAATTCTAAAGCAGAACAGAAACTCTGTGTTCCAATACAAGCACAAACTGCTCATGAAATAAAAAAGAACAATAATTATAATCAAAAAGAAAAACTTGAAAGTAACACTAATATAGATCACCATTCATATAGTTTACCAAGCTCGTCCAATGTAGAGACAAGAAATTCTAAAGCAGAACAGAAACTCTGTGTTCCAATACAAGCACAAACTGCTCATGAAATAAAAATAAACAATAATTCTAATCCTACTAAATTAGAATGCAAGCAAAATATTACATCACTACATACTAAAGTACCACATTCTGTAAATAAAGTACCACATTCTGTAAATAAAGTACCACATTCTGTAAATAAAGTACCACATTCTGTAAATAAAGTACCACATTCTGAAAATAGCAGCACTGTTATTAACAATGTCGGTAATACTCAAAAAGACTTGACAAATATGGAAAATGTGTCTTGGACGAATTACCCATGGACGTGCAAACATTGCCAGTTGAAGTTTCATACAATGCTAGAACTACGTAATCATAGTATGCAATTGCACGAACGTTGCTTTGGATACCAATGTGCCGACTGCTTGGAGAATTATAACACGTTTTATCTATTTATTGAACATGTAAGAAGACATCGAGATGCTCTAAGGTTATACTGTCCCCACTGCAATAAACAGTTTAGCACAGCTGCGGACTGCATAATGCACGAGTTGGCTTACTGGTCAAACGGACAGAAGATCTGCAACTGGTGCGGTGAAATCTGTCCCAATGCAGATGCAGTGAATGCACACAAAAGCAAGTCACGTCGAGTAACTCTGCCTAAGAAAGAAACAAACAAAGTGCCCCAGGTCGTGTCATTCTTGAACCAACACGAGCTGACCTGGAAACACTATGAGTGGGGCTGTCTGGAGTGTGCGCTGAGCTTCAAGTCTGTAGCCGAACTCCGCTCGCACTCGCAGTCTGTACACGACAAGTGCTTCGCGATGCGCTGCGCCGACTGCCTCGCTGTTAAGTACGCCTACCCGCATTTCGTCAGTCATGTTACGGCGCACCGGCCTTATCTCAGATTTTACTGCCCATACTGCGACCAACAGTTTCAAAACTCAAATGAAGTAAAAAACCATACGAAGGAACACTTAACGGGCGCCCAAAGAGCCTGTTTTGGTTGCGGACAAATATTCCAAAGTAAAGAGGAAGAAACCCAACACATGGACCGATTCAACCCGCGGCGGACCCACGAAAACCTAACCACTGACGATTTAACCTGCCACGTCTGCCAAAAAGTTTTCTGCAACACAACAGCACTAAGGTCGCATAAACGACTCCACGACGAAGTTCGAAAAAAAGACCAGTGTTGCCATCTGTGTGGGAAACAGTTTTTAAACAAAAAAGGCTTACAGAGTCACATGCTTTGTCATAACGATAAGAAATTTGATTGCAAAGTGTGTTATAAAAGATTTGCCTGTGAGGCTTATTTGAAAGTTCATGTAATGTCGCACACAAAACCTTTTGTATGCGATTATTGTTCGAAAGGATTTACTCGAAAACTACAACTAGAAAGTCATATGAACAGTATACATAACAAATCTGAAGTGATAAGAAAATATGAATGCACGTATTGTTCCAAACGTTTTAAGTACTTACAGCAATTGAAAACTCATACAAATGTGCATACTGGCGCTACTCCTTATAAATGTCAGGATTGTGAAAGGACTTTTGCGAATTGGGGGAATTGCAACACACATATGATAAATGTTCATGGTACCACTTTAGCGAAGAATAAGTTGACGGAGCGTGGAAAAGTTCCTATTGGCGAGGAGATGCCAGAAATTACGACGAACGTTCAAGAGTGGATGGCGGAGGTTACAAAAGCTAAAAAAGTTAGAAAAAACTAG
- Protein Sequence
- MSHLTGGPSQEETMAKNLTNSTICQGGKMLDARFAGLEDRLLPARVCRSPLVADKRTLVASKITENQPSAGAGSVPVTVGSAASLKKPTKKPRGDAASATPADEGWQTAGTRRAKRRKNAAQSAPSGPPPPPKKVDKTKKGSGVAAAAAPIHNPGSSIARSHCRFCAQVKNYIDLLDVATDEEAKKQLITMLNFFKIDFVDLLNSEIPGTTCRACYDEILKSYIFFLKVKVSQNILKQLYSKDNGRNYKIYIKSEPVDCVDTVVVSKYVEKEKLESNTNIDHHSYSLPSMYNVETRNSKAEQKLCVPIQAQTAHEIKKNNNSNQKEKLESNTNIDHHSYSLPSSSNVETRNSKAEQKLCVPIQAQTAHEIKKNNNYNQKEKLESNTNIDHHSYSLPSSSNVETRNSKAEQKLCVPIQAQTAHEIKKNNNYNQKEKLESNTNIDHHSYSLPSSSNVETRNSKAEQKLCVPIQAQTAHEIKINNNSNPTKLECKQNITSLHTKVPHSVNKVPHSVNKVPHSVNKVPHSVNKVPHSENSSTVINNVGNTQKDLTNMENVSWTNYPWTCKHCQLKFHTMLELRNHSMQLHERCFGYQCADCLENYNTFYLFIEHVRRHRDALRLYCPHCNKQFSTAADCIMHELAYWSNGQKICNWCGEICPNADAVNAHKSKSRRVTLPKKETNKVPQVVSFLNQHELTWKHYEWGCLECALSFKSVAELRSHSQSVHDKCFAMRCADCLAVKYAYPHFVSHVTAHRPYLRFYCPYCDQQFQNSNEVKNHTKEHLTGAQRACFGCGQIFQSKEEETQHMDRFNPRRTHENLTTDDLTCHVCQKVFCNTTALRSHKRLHDEVRKKDQCCHLCGKQFLNKKGLQSHMLCHNDKKFDCKVCYKRFACEAYLKVHVMSHTKPFVCDYCSKGFTRKLQLESHMNSIHNKSEVIRKYECTYCSKRFKYLQQLKTHTNVHTGATPYKCQDCERTFANWGNCNTHMINVHGTTLAKNKLTERGKVPIGEEMPEITTNVQEWMAEVTKAKKVRKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -