Amou041123.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- ZFY
- Assembly
- GCA_947532105.1
- Location
- OX383979.1:15611874-15624152[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.11 13 7.7 0.4 1 23 263 286 263 286 0.95 2 10 0.0012 0.15 13.9 0.8 1 23 293 315 293 315 0.98 3 10 0.38 45 6.0 2.6 1 23 319 342 319 342 0.93 4 10 3.1e-05 0.0036 18.9 0.9 2 23 376 398 375 398 0.95 5 10 0.0004 0.048 15.4 2.6 1 23 404 426 404 427 0.93 6 10 0.13 16 7.5 0.3 3 21 439 457 438 462 0.90 7 10 1.6e-05 0.0019 19.8 0.3 1 23 470 493 470 493 0.94 8 10 0.00029 0.034 15.9 0.2 1 23 498 521 498 521 0.97 9 10 8.5e-07 0.0001 23.8 3.3 2 23 529 550 528 550 0.97 10 10 1.2e-05 0.0014 20.2 1.4 1 23 556 579 556 579 0.95
Sequence Information
- Coding Sequence
- ATGGATAATAAGGATATAATTATAGATAAACTGCTCTGTGTGGCATGTTTATGCGTCGGCCGAACTCTACACGAAGTTATAGATCAGAGAGTGCAACAATACTATTTGGAAACCCTGAATCAAATACCTCTGTTTAACATGCCACAAGTGTGTCCGAGTATATGCTGGGAGTGTATGGCAATGTTCAAGAAAGCGGTTTCCTTCCGGGAACAGGTTAAAGACTCTTACCGCATCCTACAGACTTATACAAGTGAGAACCTCTATGAATGCCTGTTGACTGACATAACCCGGCCTCCTCGACTGAAAGTTCATCACATAGAGCCTGTATCCATTCCTGCATCAGCTGATGAGAAGCCGGCCCAGGAAATGGTGGAGGTGGAAGTGCCCAGGGTGGATGAGAAACCTCAGGTTGATGTGCAGTTAGTGTATGTTAAGGAGGAAATTGTTGACTTGTTTAAGGATCTTGATGATACTCATTTGTGCCATAACGAAAACCATGACAGATCTCCCTCAGTGTGTTCAGAAAATGTTACTGATATGGAGACAACTATCAATAAAATCATCAGAAAGAAACGAAGGAAAAAGTGCAAAACAAAAATAAAAGAGAAATTGAAGATGAAGAAATCAAATAAAATTGTGAAAAAAATTAAGACTGACAAGCTAACCAAGCACATAAAACCGGATGAAGGAGAGGAACAAAAGATACTCACCATAGAATTGTCATATGAAGACATGTTGCTAGAAAGAGAGAGAGAATCGACGAGGGAAAGTTATGTCAGCGCTGAATACAAGTGTGAATCGTGCTTGATTGGGTTCAACTATGCCAAATCGTATGAAACACATGTTGCCTCTAAACATTCTCCAGACCTAGGAGAATACAGCTGTCCGATTTGCAAAACGGTAATAAAAACCATGGACGCGTTCACTTCTCACTACAAGCGGCATATGAGGCGTTACGAGTGTAGTATCTGTCACAAACGCACTATGGATATTAAGGTGATGCAACAACATTACTATACGACGCACCAGATATCGCTTAAAGAGTATCATTGTACGCAGTGCGGGATTATATCCAAATCAATAGAAAGACACCGCTACCACCGTGACACGCACAAATCCCGCGTCCAGTGTTCGGAATGCGAGAAAACGTTCAGTCACCGCGCGGGGCTGTTGACTCACAGACGGGCGGTGCACGAGCGGCGCAATACCTTCCTGTGCACCGATTGTGGGCGACCCTTCCGCTGGCAGACCAGTCTGAACCGGCATCGGCTCAAACACCACTCACAGGATAAACAGTCTTCCCCGGCAGCGTTTTGTACTCCGTGCGATATCGGCTTTGCGTCCGTCAGCTCGTACCAGCGTCATCTGAGAAACAGCCTTAAGCATGTCACAGAAAACCAGCTCAGGTTTATTTGCGACGAATGCGGCCGCCGGTTCGCGGACAAAACAAAACTGCGCGATCACATCGAAGAGAAGCATTTACACAAGACGTACCAGTGTGACATCTGTCAGAAGCCCTCCAAGAGCCGCGTGGGCCTCGACCAACACATACGAAACGTGCACAAGGGCCGGCCGCACAACAAGATGTGCCACCACTGCGGGAAGGGGTTCCCGACAAAGGTACAACTGGAGTCCCACATCCGAACGCACACAGGGGAGCGGCCGTTCATCTGCGAGTTCTGTCCCACTACCTTCTCCCAACAGTCCAACTTGTACAAACACAACAGACAAGTCCACATGAACATAAAATCAAAACGCTACCCGATAACGAAGAAACGGAAAGACGCCTCCGAAGCGACGAACGAAAATGATCAGTTTACGAGACCGGCCCTACACTTTACCACCGATAGGAATTTCGTTATATGA
- Protein Sequence
- MDNKDIIIDKLLCVACLCVGRTLHEVIDQRVQQYYLETLNQIPLFNMPQVCPSICWECMAMFKKAVSFREQVKDSYRILQTYTSENLYECLLTDITRPPRLKVHHIEPVSIPASADEKPAQEMVEVEVPRVDEKPQVDVQLVYVKEEIVDLFKDLDDTHLCHNENHDRSPSVCSENVTDMETTINKIIRKKRRKKCKTKIKEKLKMKKSNKIVKKIKTDKLTKHIKPDEGEEQKILTIELSYEDMLLERERESTRESYVSAEYKCESCLIGFNYAKSYETHVASKHSPDLGEYSCPICKTVIKTMDAFTSHYKRHMRRYECSICHKRTMDIKVMQQHYYTTHQISLKEYHCTQCGIISKSIERHRYHRDTHKSRVQCSECEKTFSHRAGLLTHRRAVHERRNTFLCTDCGRPFRWQTSLNRHRLKHHSQDKQSSPAAFCTPCDIGFASVSSYQRHLRNSLKHVTENQLRFICDECGRRFADKTKLRDHIEEKHLHKTYQCDICQKPSKSRVGLDQHIRNVHKGRPHNKMCHHCGKGFPTKVQLESHIRTHTGERPFICEFCPTTFSQQSNLYKHNRQVHMNIKSKRYPITKKRKDASEATNENDQFTRPALHFTTDRNFVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -