Amou019615.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383973.1:10746558-10755242[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.02 2.3 10.1 0.9 3 21 130 148 128 149 0.95 2 17 1.1e-05 0.0013 20.3 2.7 1 21 294 314 294 315 0.93 3 17 0.12 14 7.6 0.7 2 23 320 340 320 340 0.96 4 17 0.21 25 6.9 0.2 1 23 375 397 375 397 0.94 5 17 0.13 16 7.5 4.9 1 21 400 420 400 421 0.94 6 17 0.0049 0.58 12.0 0.5 1 23 435 458 435 458 0.92 7 17 0.0002 0.024 16.4 1.6 1 23 464 486 464 486 0.97 8 17 0.081 9.7 8.2 1.5 1 23 520 543 520 543 0.94 9 17 0.027 3.2 9.7 0.9 2 21 675 694 674 695 0.92 10 17 0.016 1.9 10.4 0.1 1 23 728 751 728 751 0.95 11 17 5.7e-05 0.0067 18.1 0.1 2 23 757 778 756 778 0.96 12 17 0.92 1.1e+02 4.8 1.4 2 21 782 801 782 802 0.91 13 17 7e-05 0.0084 17.8 1.7 1 23 828 851 828 851 0.94 14 17 0.001 0.12 14.1 0.4 1 23 857 879 857 879 0.92 15 17 0.38 45 6.0 0.0 2 23 886 907 885 907 0.96 16 17 0.0043 0.52 12.2 0.3 1 23 913 936 913 936 0.94 17 17 0.12 15 7.6 0.9 2 23 943 965 942 965 0.95
Sequence Information
- Coding Sequence
- ATGACACACGTCAACGCTGCTTTACCTCTCATCAAATTGTGCAAGACATCTATAAAAAAATGGAATGAATTCGCAGACTCCCTTTGCCAATATAACGTACCAGAGAACACTAAGAACTTGTACTTAGTACTTGAAGAACAAGGCACAAGGGTATTAACTGACAACTGGAAATGTCCTACTTTGCCTCCTGTAAACGCTAAAGCTGTTCTGAAAAACTTTAAGAACAGACTGTATCGCCTCAAGGCATACAAAAAGCGTAATGAGAAAGCGACTGAATTGATACGTGAAACTGAATCATATTTGCAGGCTACTAACAAAGAAGAAATAGAAACGACTGGAACAAGTTTGAAAACAAAGAATTGTCTGCGGAAAAAAAATGCTATGATTTGTCCTCAATGTAATTGTGTGTTTGGAAAGAGAATCAGCTTTCGCAATCACATCCGTAATCTAGGTCTTGTGGTCTGTTCACGCTGCAAGGCTTTGTTGCATATAGACAATTTAAAAGACCATCTAAGTACTCATAATATTAAATTATATTCTTGTGTGGCGGATGACTCGGATCTTCCACCGGGCTTGTGCTGTGCTTGCTCGGATGAGGCGCTCAGAACACATCATTTTCGACAACTGTGTCAAGATTCACACAAAAAATGGAAAAAAGCGGTCGACTCCCTCTCCCTCATTGATGATCCTTCCGAATGCGATAAGACTTACTACATATTTTATGACTACGGAGTAGAAACTATAATCCGAGATCAAGTATCGAAAGTTTCAAACACTTCTGAAGCTTTACAGAGAATAACAGCTCAATCAGTCCAGTATAATACACCTCTAGATCAAGAAAATGATACAAAAAATGATAAAAGTAACATCCCTAGGAAATGCAAGTGCCCCGATTGTGGAAAAAAATTTACGAGACTTCATTCTTTAAACCAACATTTAATACGTTCTTCAAAACGAGTTTGCCTGCATTGCGGAATAGTCATATCAAAACAAAGTTTAGCAAGACATTTACAAAAACATGGAGAGGTTGTACTTCCTTGCAAGATTTGTTTTGATGTTTTTGTCGATTCGGCTAGTTTAGACTTCCACGATAAATTAACTCATAGTGTGACTTCGGGTATGCATGTTTGTACATCATGTAGTGCCGCGTATCCAAGTGCAAGAGCGCTACGTGCACATTTTGTTTCACATGCACTATTTCACTGTGAGAACTGTAACATAAGCTTTGAAAACCGAAAATGTATGAGACACCACCTACAATTATGTAAGCGTCGCGACTACACGGTTTCATCACGAAATTTATATATTTGTGATCATTGTGGAGCTCAATATGATAAAAAACCTTCTTTGAAAGTCCACATAGTTCAAAAACATTTAAATGTTTTACCTTTTATTTGCCAAACTTGCGGAAAAAAGACATCAACTCTTGCTCACCTGCGGTCTCACGAAAATGTGCACAAGACAGAAAGACCTTTGATATCATGCCATTGTGGAGCGCAAATGCGAACGTACTTGGGCTACCAACTTCATCAAAGGATTCATACAGGAGAAAAGCCATATGAATGCGCGGACTGCGGAGAATGTTTTCTCTCGTCTTCTAGGCGGTTAGATCATATAAAAAGACGACACAGAAGTACCAAGGACATGCCTCACGTTTGCGACAAGTGTAATGCGCGGTTCATGTGTGAAGATAGCCTGTATCCGCCTGGAGCCTGTGTCTCTTGTACTAGTGCTTTGATGGCTGCTCAGGAATTCCGGGCTCTCGTCCTCAGCTCGCAGAAACTATGGTCCAAGGGTGTAAATAACTTATCAAAACTTTCTACTGACACTATAGACACAACCACTTTTCCACTGATAAAGTCAGTGTTCGCTTTCCTAAATAAAGATGGCTTATCCATTCAAGTAGTAAAAGACTATTCCGGTTCAGGACCAAGTAATGTACTTAAAAGTATGACTTATACTTCATCAGTGAAGAAAAAGATCGAGAAAAAGCCCCGGTCAATAAGAACTGGGCCCCCTTGTGACTGCACAGACTGTGGACAACGTTTCCTCAGCCCATACTACTTGAATTTGCATTTGAAGAATAGCGGTCAGAAAGATGCTTGTCTCATATGTGGAACTATAGTCTTACGAGGTCATGAAATGAAGGAACACCTCAGTTTCGTTCACAGAAGAACAACTTACCTTTGTACCAACTGCCCTGCTTTATTTGAAAAAGAAGTCGATCTCAAAAAGCATCTAAAAGTAGCTCACAAACCAGGTGCCTTAACATGTGGAGACTGTGGGAGAACATTCCCAAGAAATGGTGCTTTTGAAGCGCATTCTCAAATGCATGCAGTTAGGACCTGTAGAGCGTGTGGAGCCCAGTTCGCGAACCGGGGATGTTATCGGAAACACAGATCAAGGTGCGAACCGACGGCGAAACCAGACACTCAAAGTATGCCTAGAAACAAACGCTCGAACGTTCGAGATCCAGCCACATTCATTTGCGATCATTGCGGCAAAACATACCACTCCCGCCCACAATTGAAAAATCACATCATCTGGATTCATATGGATGTCAGGCCGCATCAATGTTCGTGGTGCGGTAAACGATTCTATACGCCAGCGCGATTAGCAGAGCACAGCGTAGTTCATACTAGGGTGCGAAACTGGGAATGCGACATATGTGGAGCCAAATTAGTGTCTAAAATGGCCGCTGTGTACCATAGACGGCGGCATACGGGCGAGCGTCCTTATGAATGCGAGGACTGTGGCGAACGGTTCATCTCTGCTTCCCGTAGGTCAGAGCACGCCAAAAGAAGACACAACAAAGGTCCAAGGCTTCAGTGTAATTTCTGCATAGCCACATTTGTCAGGGGTCATGAACTTAGAAAACATTTAGAAAAAGCGCACAAAATCAAAGATATGTCAGCTCATAAAGAAAATGAATGCCATATTCAGCCAGTTAACATAAAAACCTTACAATAG
- Protein Sequence
- MTHVNAALPLIKLCKTSIKKWNEFADSLCQYNVPENTKNLYLVLEEQGTRVLTDNWKCPTLPPVNAKAVLKNFKNRLYRLKAYKKRNEKATELIRETESYLQATNKEEIETTGTSLKTKNCLRKKNAMICPQCNCVFGKRISFRNHIRNLGLVVCSRCKALLHIDNLKDHLSTHNIKLYSCVADDSDLPPGLCCACSDEALRTHHFRQLCQDSHKKWKKAVDSLSLIDDPSECDKTYYIFYDYGVETIIRDQVSKVSNTSEALQRITAQSVQYNTPLDQENDTKNDKSNIPRKCKCPDCGKKFTRLHSLNQHLIRSSKRVCLHCGIVISKQSLARHLQKHGEVVLPCKICFDVFVDSASLDFHDKLTHSVTSGMHVCTSCSAAYPSARALRAHFVSHALFHCENCNISFENRKCMRHHLQLCKRRDYTVSSRNLYICDHCGAQYDKKPSLKVHIVQKHLNVLPFICQTCGKKTSTLAHLRSHENVHKTERPLISCHCGAQMRTYLGYQLHQRIHTGEKPYECADCGECFLSSSRRLDHIKRRHRSTKDMPHVCDKCNARFMCEDSLYPPGACVSCTSALMAAQEFRALVLSSQKLWSKGVNNLSKLSTDTIDTTTFPLIKSVFAFLNKDGLSIQVVKDYSGSGPSNVLKSMTYTSSVKKKIEKKPRSIRTGPPCDCTDCGQRFLSPYYLNLHLKNSGQKDACLICGTIVLRGHEMKEHLSFVHRRTTYLCTNCPALFEKEVDLKKHLKVAHKPGALTCGDCGRTFPRNGAFEAHSQMHAVRTCRACGAQFANRGCYRKHRSRCEPTAKPDTQSMPRNKRSNVRDPATFICDHCGKTYHSRPQLKNHIIWIHMDVRPHQCSWCGKRFYTPARLAEHSVVHTRVRNWECDICGAKLVSKMAAVYHRRRHTGERPYECEDCGERFISASRRSEHAKRRHNKGPRLQCNFCIATFVRGHELRKHLEKAHKIKDMSAHKENECHIQPVNIKTLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -