Amou002001.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383982.1:10668144-10671371[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00039 0.046 15.5 1.2 1 23 191 214 191 214 0.96 2 18 0.00014 0.017 16.8 0.4 3 23 227 248 226 248 0.97 3 18 0.0007 0.083 14.7 1.5 1 23 257 280 257 280 0.96 4 18 0.0003 0.035 15.8 2.0 3 23 294 314 293 315 0.95 5 18 0.0019 0.23 13.3 1.1 2 23 341 363 340 363 0.96 6 18 0.0033 0.4 12.5 1.1 2 23 373 395 372 395 0.95 7 18 0.023 2.8 9.9 1.4 2 19 400 417 399 420 0.91 8 18 0.00025 0.03 16.0 0.7 2 21 425 444 424 447 0.94 9 18 0.026 3.1 9.7 0.6 3 23 457 478 456 478 0.94 10 18 0.0005 0.059 15.1 2.6 1 23 483 506 483 506 0.94 11 18 0.0041 0.49 12.2 0.7 2 23 518 540 517 540 0.95 12 18 0.0023 0.28 13.0 0.7 1 23 560 583 560 583 0.94 13 18 3.3 4e+02 3.1 0.9 2 23 589 610 588 610 0.88 14 18 7.9 9.4e+02 1.9 2.6 2 23 617 638 616 638 0.95 15 18 1.9 2.3e+02 3.9 0.9 3 23 646 668 644 668 0.91 16 18 2.1 2.5e+02 3.7 0.5 2 23 676 697 675 697 0.91 17 18 0.0062 0.74 11.7 0.5 1 23 704 726 704 726 0.97 18 18 0.28 34 6.4 2.4 1 23 732 755 732 755 0.96
Sequence Information
- Coding Sequence
- ATGGCACCTAAAAAACAAAAGGAATCAGATTCAGTAATAAAGTCTGAACCACCAGCAGTAATGGAACGGAAAGATCCAACATCATTTCTTCCTGAAGAGCCAATGTCTTACGAAATAAAAAAGAAAAAGAAGAAGAAAAAAAAGAAATTGCAAGAGGATGATCCATTTAAAGATATTGAGGAACGAGCATTGGTAACAGAACGAGTTTTAGCACCGGAACAAGAGATAGATACTTGGTTGGATCCAGAAGTTACAATTAAAGTGGAAAATATTGAAGTTGAGCTGGATTTTAATGATTTTAATAATGACGATATGATGGTAGAACAAAATGATGACATTCAAGAGCCCGCTGTTAAATATGAACAACAAAACAAAGAAGCTGTCTTATTAACCTTTGAAAGCATTATTAATGATAAGAAACCTTTGGAATTAGAAATTGATAATAATATCTCCATAACCAGTGCTGCAGAAGGACACATGTGTAAATTCTGTCATCTTCTCTTCAAAAATCAAAAAACTCTAATGTGTCATCAGAAAAGAAAACACAAAGTCTATAGACGTTCCTGCATGCACATTTGTGATCACTGCGGAATGGCTTATGAAGCTAAAAATAGTCTCGTGGCTCACATGAGACGAAGACATGGTCCTGATGTTGACAATGATGTGGAAGTGAGAGCTTGCGAAGAGTGTGGGCTAGTCTTTAAAGGAAGAGGCAGGTTACGTATGCATATGAGAAGAAAGCATGGAGCTTATGAGGATGCATTCAAACATGCCTGTGAAGATTGTGGTCTTACTTATGAAAAGTTCTCCAGCTTGTTGGTTCACAGGCGGAGAAAGCATGCTAGGGTTAAGAAAGAGGTATTAGAGCAATGGGTTGCTTGTCCCTTTTGCTCAAAAATGTATAGGAACAGAGAAACTTACGCTAGACATATTCAAAGACATCACCATCCAAAGAAAGAAGATGGAAATCCCGAACCACTGACTGATGCATTTAAAGAAACAAATCTAGCTGGGGAAATATCCTGTAATCAATGTCCTTCAGTATTTTCTTCAAGAATGTTCCTTAAACTTCACCTTAGGAGAAAGCACAATGCTTTAACAGAAAACTTTAGATTGAAGTGCCGTATTTGCAATTTGTCATATGACAAAATCGAAAGCCTAAAAAGGCATATTACAAGAAAGCATAATCAAGGATTGTACTGCAATGAATGCAATAAACAATTTACTACACGACAGCGATACATGAATCATTCTCATGTTCAAACAATCAAGGAATGTTCAGTATGTGGAAGAATTTTCGCTTCACAAGGCGCCCTGGCGAAGCATTTGCGGTGTACGCACAAAGTTGAAACTCCGAAAACAGTTTTCTGTAGCATTTGTAATGAAGGATTTTATGACAAACGTCAGTTAAGACCACATGTATTAAAGAAACACTACAATGTATCTTATCCATGCAAATTTTGCAAAAAAGTTCTGACAACAAAGGAGAGTTACCGGAGGCACATATTGTTCAAACACCCATCAACCATGAATGCCCCTAAACTGGTTCAAAAATGTGAAAAGTGTAATGCCACTTTTGTTGATGAATTTGAGCTTTGTGAACATGTTAATCTAGCTCATAGGAATATAGATATGAAACCTGTTATTAAAACTGAAGGAGAAAATGATTGTGATAGTTACCAGTGCACAAAGTGTCCAGAAAAGTATTCTACTTGGGATATTCTAAGGTCACACTATGAACAAACTCATTTAGCTAACACATGTATGTGCCAAGTCTGTGGCCAGCAAGTTTTAGAGATAGAGCTACAAAAACATATAAAACAAATGCACACTGAAAATGAAGAACTTGTTTGTAGATTCTGTAATTTCAAAACAAATGTACGGTTTACTATGACTCAACACACATTGAGACATAAAAATGCAACAACGCTAAATTGTGAGTATCCAAATTGTCGGTACAAAACGTATTACGAAAGTGCCATGGAAAAGCACAAGAAAAAACATCAAGAGTACTCAGTGAGGCTTCAGTGTACGCAATGCCCTTTTCAAACTATGAACAAGTATGTTTTAAAATATCATGAAGAAGCACATGACCCTGGCAAAAAGCGCTATAAATGCGATAAATGTGAGTATGCCACAAACTTGCCAGCAAATTTAATTCAGCACAAATATAAACATTCAACAGAGAAACGTTTCAAATGTGAAATGTGTCCGTTTGCCACAAAATATAATACCTCATTAAGGTTCCATGTAAAAAAGAAACACTGTGATCTCCCGTTGTGA
- Protein Sequence
- MAPKKQKESDSVIKSEPPAVMERKDPTSFLPEEPMSYEIKKKKKKKKKKLQEDDPFKDIEERALVTERVLAPEQEIDTWLDPEVTIKVENIEVELDFNDFNNDDMMVEQNDDIQEPAVKYEQQNKEAVLLTFESIINDKKPLELEIDNNISITSAAEGHMCKFCHLLFKNQKTLMCHQKRKHKVYRRSCMHICDHCGMAYEAKNSLVAHMRRRHGPDVDNDVEVRACEECGLVFKGRGRLRMHMRRKHGAYEDAFKHACEDCGLTYEKFSSLLVHRRRKHARVKKEVLEQWVACPFCSKMYRNRETYARHIQRHHHPKKEDGNPEPLTDAFKETNLAGEISCNQCPSVFSSRMFLKLHLRRKHNALTENFRLKCRICNLSYDKIESLKRHITRKHNQGLYCNECNKQFTTRQRYMNHSHVQTIKECSVCGRIFASQGALAKHLRCTHKVETPKTVFCSICNEGFYDKRQLRPHVLKKHYNVSYPCKFCKKVLTTKESYRRHILFKHPSTMNAPKLVQKCEKCNATFVDEFELCEHVNLAHRNIDMKPVIKTEGENDCDSYQCTKCPEKYSTWDILRSHYEQTHLANTCMCQVCGQQVLEIELQKHIKQMHTENEELVCRFCNFKTNVRFTMTQHTLRHKNATTLNCEYPNCRYKTYYESAMEKHKKKHQEYSVRLQCTQCPFQTMNKYVLKYHEEAHDPGKKRYKCDKCEYATNLPANLIQHKYKHSTEKRFKCEMCPFATKYNTSLRFHVKKKHCDLPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -