Amou020492.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- Zfy1
- Assembly
- GCA_947532105.1
- Location
- OX383973.1:26983487-26996073[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.025 3 9.8 2.6 1 23 246 268 246 268 0.97 2 11 1.9 2.2e+02 3.9 0.0 6 23 280 298 280 298 0.93 3 11 0.092 11 8.0 0.2 2 23 307 329 306 329 0.95 4 11 0.0056 0.67 11.8 0.5 2 23 353 374 352 374 0.90 5 11 0.25 30 6.6 3.5 1 23 527 549 527 549 0.96 6 11 0.00021 0.024 16.3 2.0 2 23 556 578 555 578 0.92 7 11 6.8e-06 0.0008 21.0 3.2 1 23 584 606 584 606 0.97 8 11 1.2e-06 0.00014 23.4 2.9 1 23 612 634 612 634 0.98 9 11 2.4e-05 0.0028 19.3 0.7 1 23 640 662 640 662 0.98 10 11 0.00014 0.016 16.9 5.2 1 23 668 690 668 690 0.95 11 11 1.2e-05 0.0015 20.2 2.3 1 23 696 719 696 719 0.97
Sequence Information
- Coding Sequence
- ATGAATACAGCGACGGAACAGATATTTCTGATCAATCCTTCGGGCTCTCAGCCACCAAGTCTGCAGCAGAAAGTTGGTGAAATCCGCGATACTGGGCAGGTTAACCTAGAGAACGTAGAAGACTTCTCGACAGTATGCCGGACATGCGCGACTATAACAGAGTTCCTTATTCCAATATTCTCCGGAGAGGGGCTACAGAACAACCTGGCTGATAAGATCCACAAGCATTTACCTATACAAGTGTCAGAAGAAGATACTCTTCCGCGAGCAGTATGCTACCAGTGTGCTCACACGCTGCTGGCTTGGCACGAGCTGGTGGCTTGCTGCCAACAAGCGGACCAAGCGCTGAGGACCAGGCTTCAGCAGATACAGTGCGCACAGGATCCTAGACCGAATGAAATAACAAGCAATGGAGACAACCAGATGGAAAATCCACAAAAAGAGTTTTCAACTTCATCTAGTGCATTAATACAAGAAATACTTGATAAGAGTATACTTCGTGAGATAGATGACGGTGAATGGAAGTACTGTTGTTTGAAATGCTCAGACGAACCGATTTGCCTAAACGCAGACGAACTAAATGACCACATTAAATCAGTACATGCATTGGAAGCAAAAAATATAAACGATTTGGAGAATTTCATTAAAACAAATATTACTTTTGAACAGACTTTGTATATAGAAGATTTTGATACAGACAATGATTCAGTTAAGATGTCTAAACCTATTTTTGACTTTTGCTGTCCATTTTGTGTTGCCGTCTTTACTTCAAGCAAACGGTTACTGTACCATTTAAACAAACATTCGGAAGTAGACATTGTAGACAAAGTCACTTGTTGCGACACGCCTTACAGTAATAAAAAATCCTACGTCATGCATTTGGAAGAAGCTCACGTTAAGAAAAGTGTACCTTCCAATCAATGCAGATCTTGCGGCTATACAGGAGAATCTGTCAAAAACCTACAAGAGCATATAGCTTCAACACATGTCGCTGAAAGTGAAAAAGGAAAAAAAGTTACAAAAAGAAGTAAAAACAATCAAAAATACATCCCAGTGCCTTGCCCCGAATGTCAAAAAATGTTCTCAAATAAATACCGCATGCAATTCCATTTAGAAAGCCATTATCAAGAGAAAAGATACTTCTGTGACGAGTGTGACCCCTGCCTGTATACCGCTGATCAACCCGCAACCCTCGAAGGCCTATGCAAGCAAACGGAACTAAAAAATAATTTAGGCGATTCAGACGGACCTAACCTTGATATATCTGATGAGGACGAACCTTTATCCTCGTTAGCAACGAAGAAAGCTTCCGATATCTACAATAACTTTTACAAAGCATTACTTAATTTTAGAGATCACTTTGCTGAAGGGCATAAAATAAAAGATTTGACTTCAGATGTTAGTGATTCTAGTGACTCAGAATTAATAGTCGAAGATACAGGCAGTATAAAATACGAAGACCATGAAGTTGATGATTACGATGACTTGACACAAAGTAATATGAGAAAAGATAGAATGGACGAAGAAACACGTTTAGAATTGAGTGAAGTACAGACGAAAATCAACGGTAAAGTTTACTACACCTGCAGAATTTGTGATAAAAATCTCAGTTCGTCGCACACGTATGTATTCCACAAGCGGATACACACGGGCGAACGTCCGTGCGTGTGTCATATTTGCGGAAAGCAGTTCCGAGCACCGAACGGTTTACAGCGACATTTAACGGAAACGCACGAGAAAGTCCGAAGACATTCCTGCCGATTCTGCCCCAAGAACTTCGCCAACTCTCAGAACTTAAAGCAGCACATGCGAATCCACACCGGCGAACGTCCATTCGTGTGTTCACAGTGTGGCAAAAGATTTACTCAAAGTGGTACCTTACATGTACATCAAAAAACTCACAGCGAGCAGTTCCCATATCAATGTGCCGAGTGTGGAGCTAAGTTCAAACTGAGATCAGGACTAACCAGACACAGACTGAAGCACACAGGAGAGAGACCGCATATTTGTGTGCATTGCGGCAAGGCATTTAGACAAAAGCACGAATTGAACAACCACAGTCTGTCTCATTCCGACTCGAAACCTTTTAGCTGTACACTTTGCGGGGCAACCTTCCGCCAGCGACGCGCGTTGACGCATCACATCAAAAGACTTCACGAAAACGAAAACAGAGACGCAACACAAACTATACGAGCACCAAATATGGTGGTTTATACTCAAATCGCTCCATATCAATGA
- Protein Sequence
- MNTATEQIFLINPSGSQPPSLQQKVGEIRDTGQVNLENVEDFSTVCRTCATITEFLIPIFSGEGLQNNLADKIHKHLPIQVSEEDTLPRAVCYQCAHTLLAWHELVACCQQADQALRTRLQQIQCAQDPRPNEITSNGDNQMENPQKEFSTSSSALIQEILDKSILREIDDGEWKYCCLKCSDEPICLNADELNDHIKSVHALEAKNINDLENFIKTNITFEQTLYIEDFDTDNDSVKMSKPIFDFCCPFCVAVFTSSKRLLYHLNKHSEVDIVDKVTCCDTPYSNKKSYVMHLEEAHVKKSVPSNQCRSCGYTGESVKNLQEHIASTHVAESEKGKKVTKRSKNNQKYIPVPCPECQKMFSNKYRMQFHLESHYQEKRYFCDECDPCLYTADQPATLEGLCKQTELKNNLGDSDGPNLDISDEDEPLSSLATKKASDIYNNFYKALLNFRDHFAEGHKIKDLTSDVSDSSDSELIVEDTGSIKYEDHEVDDYDDLTQSNMRKDRMDEETRLELSEVQTKINGKVYYTCRICDKNLSSSHTYVFHKRIHTGERPCVCHICGKQFRAPNGLQRHLTETHEKVRRHSCRFCPKNFANSQNLKQHMRIHTGERPFVCSQCGKRFTQSGTLHVHQKTHSEQFPYQCAECGAKFKLRSGLTRHRLKHTGERPHICVHCGKAFRQKHELNNHSLSHSDSKPFSCTLCGATFRQRRALTHHIKRLHENENRDATQTIRAPNMVVYTQIAPYQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -