Amou039445.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383984.1:7492436-7497245[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.32 38 6.3 0.2 3 23 2 23 1 23 0.90 2 16 0.17 20 7.2 0.1 2 23 49 71 48 71 0.95 3 16 0.0024 0.29 12.9 2.9 2 23 94 115 93 115 0.96 4 16 0.004 0.47 12.3 2.9 1 23 119 142 119 142 0.95 5 16 0.0042 0.5 12.2 0.6 1 21 146 166 146 167 0.95 6 16 0.13 15 7.5 1.3 1 20 174 193 174 197 0.89 7 16 0.00019 0.023 16.4 2.7 1 23 204 227 204 227 0.97 8 16 0.082 9.8 8.1 3.2 3 23 234 254 230 254 0.94 9 16 5.7e-05 0.0068 18.1 2.1 1 20 260 279 260 282 0.94 10 16 0.11 13 7.7 0.2 2 23 331 353 330 353 0.89 11 16 6.6 7.8e+02 2.2 0.2 2 23 379 401 378 401 0.89 12 16 0.0008 0.096 14.5 1.1 2 23 423 444 422 444 0.96 13 16 0.00075 0.089 14.6 0.3 2 23 449 471 448 471 0.95 14 16 0.006 0.72 11.7 1.1 1 21 475 495 475 496 0.95 15 16 0.00029 0.034 15.9 0.3 1 23 503 526 503 526 0.91 16 16 0.0016 0.19 13.5 3.5 1 23 533 556 533 556 0.97
Sequence Information
- Coding Sequence
- ATGTGTGTTTACTGCTTAGACAAATTTACTGACCCGGCTGAATTCAGACTACATATGGATGACAAACATAAAACTCCGAAGGCATCACGTGCCTTCAATAACGTGCAAAGCATGGGGTACATTAAGGCAGACTGCACGAATCTTCGCTGCCGTCTTTGCACAGAACCCTTCGAAACTGTAGAATCTATCGCAACGCATTTACGCGAAATGCACAACTTATTGATGAGCTCACAGGATGACACTCGCATTCATCCTTTTAAATTGGAAATTGATAAATGGAACTGCTTCATTTGTCAGAAGAAATTTCCTTCAATCCACACCCTCAGTAGGCACACAACAACGCATTACTGCAAACATACTTGCGATCAATGCGGCAAGAATTACTTAACTCAAGAGAATCTAAGGTACCACACGAAACTTTCTCATGCACAAAACCACAAATGCAGAAAGTGCTGGAAGGAGTTTGCAACCAAAGAAGAGAAAATTGAACACATGAAAGCTTCAAAAAGGTGCCAACCTTTTATATGCGTGACTTGCGGAGAAAAGTTCATGTCCTACGAACATAAGCAAAAACATAAAGTTGATGCGCACGGATCGAAGGAAAAGTTGCATAAATGCACTGATTGCGACGCAGTGTTTAAAGCGAGACAGTCTTTAACCAAACACTTCAAGACAGAACATACAGATGAATGCAAAATTTGCCCGTGCTGCGGCTTGAAATTTGTTCAAAAGAAAAAACTCGACGAACATCTTAACAGTCACACTGGAGAGAGACCGTTCCAGTGCGAGGTGTGTCAAAAGCAGTTCTCTCATAAAAGGAACCTCGACCAGCACATGTGGATTCATAAGAAAGAAAAACGGTTCCAATGTGTCCATTGTAACATTGACCTTGGAACCGAAAACCCACGCCATGGAAAATTGCGCAACGCAAAAATAATACTGCAGTATTCAACTTTGTATCCCTTCAGAGTGACAGGCGTGAAGGGCATCATGTGTGTCTACTGCTTAGACAAATTCACAGACCCGGCTGAATTTAGACAACACATGGATGATAAACATAAAACGCCCAAAGCAGCTAATGCATTATTTAACGTTCAACGCATGGGGTACATCAAAGCAGACTGCACGAACCTTCGCTGCCGTCTCTGCCAAGAACCCTGCGATACTGTAGAATCGATCGCAACTCATTTGATCGAGATACACGACTTCGCCATTTCACAGGATGATACTGGTATTCATCCTTATAAATTGGAAATAGATAAATGGAACTGCTTCGTCTGTCAAAAGAAATTCCCTTCAATCTACAGCCTAAGCAGGCACACAACAACGCATTACTGCAAAGACACTTGTCCGGAATGTGGCAAGAATTACTTAACTCAAATGGCTCTTAAGTATCACATGAAACTCTCTCATGCGAAAAATCACAAATGCAGGAAATGTTGGAAGGAATTTCCAACTAGAGAAGAGAAAAATAAACATGTGAGAGCTTCGAAAAGTTGTCATCCTTTTAAATGTCCGACTTGTGGAGAAATGTTCATATCTTACGATAACAAAGAAAAACATAGAGTAGAAGCGCACGGCTCGGAGGAAAGATCATATAAGTGCACAGATTGTGACGGAGTATTTAAGTCGAGAAAGGGTTTCCACAACCATTTCAAAATGGAACATATGGACGTCTGA
- Protein Sequence
- MCVYCLDKFTDPAEFRLHMDDKHKTPKASRAFNNVQSMGYIKADCTNLRCRLCTEPFETVESIATHLREMHNLLMSSQDDTRIHPFKLEIDKWNCFICQKKFPSIHTLSRHTTTHYCKHTCDQCGKNYLTQENLRYHTKLSHAQNHKCRKCWKEFATKEEKIEHMKASKRCQPFICVTCGEKFMSYEHKQKHKVDAHGSKEKLHKCTDCDAVFKARQSLTKHFKTEHTDECKICPCCGLKFVQKKKLDEHLNSHTGERPFQCEVCQKQFSHKRNLDQHMWIHKKEKRFQCVHCNIDLGTENPRHGKLRNAKIILQYSTLYPFRVTGVKGIMCVYCLDKFTDPAEFRQHMDDKHKTPKAANALFNVQRMGYIKADCTNLRCRLCQEPCDTVESIATHLIEIHDFAISQDDTGIHPYKLEIDKWNCFVCQKKFPSIYSLSRHTTTHYCKDTCPECGKNYLTQMALKYHMKLSHAKNHKCRKCWKEFPTREEKNKHVRASKSCHPFKCPTCGEMFISYDNKEKHRVEAHGSEERSYKCTDCDGVFKSRKGFHNHFKMEHMDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -