Basic Information

Insect: Athrips mouffetella
Gene Symbol: -
Assembly: GCA_947532105.1
Location: OX383970.1:4060250-4088756[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.024 2.9 9.8 3.0 1 23 340 362 340 362 0.96

2 12 7.7e-05 0.0092 17.7 0.5 2 23 370 391 369 391 0.94

3 12 0.029 3.4 9.6 0.8 1 23 395 417 395 417 0.97

4 12 0.00048 0.057 15.2 0.9 1 23 422 445 422 445 0.98

5 12 0.0037 0.44 12.4 0.2 1 23 449 472 449 472 0.94

6 12 0.0034 0.41 12.5 0.2 2 21 488 507 488 512 0.92

7 12 0.00099 0.12 14.2 1.4 3 23 522 543 522 543 0.98

8 12 1.6 1.9e+02 4.1 0.6 2 23 563 585 563 585 0.94

9 12 2.5e-05 0.0029 19.2 1.3 1 23 596 618 596 618 0.98

10 12 4.5e-05 0.0053 18.4 1.7 1 23 624 646 624 646 0.99

11 12 0.026 3.1 9.7 2.8 1 23 652 674 652 674 0.97

12 12 5.7e-05 0.0068 18.1 0.2 1 23 680 703 680 703 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.024	2.9	9.8	3.0	1	23	340	362	340	362	0.96
2	12	7.7e-05	0.0092	17.7	0.5	2	23	370	391	369	391	0.94
3	12	0.029	3.4	9.6	0.8	1	23	395	417	395	417	0.97
4	12	0.00048	0.057	15.2	0.9	1	23	422	445	422	445	0.98
5	12	0.0037	0.44	12.4	0.2	1	23	449	472	449	472	0.94
6	12	0.0034	0.41	12.5	0.2	2	21	488	507	488	512	0.92
7	12	0.00099	0.12	14.2	1.4	3	23	522	543	522	543	0.98
8	12	1.6	1.9e+02	4.1	0.6	2	23	563	585	563	585	0.94
9	12	2.5e-05	0.0029	19.2	1.3	1	23	596	618	596	618	0.98
10	12	4.5e-05	0.0053	18.4	1.7	1	23	624	646	624	646	0.99
11	12	0.026	3.1	9.7	2.8	1	23	652	674	652	674	0.97
12	12	5.7e-05	0.0068	18.1	0.2	1	23	680	703	680	703	0.98

Sequence Information

Coding Sequence: ATGGATGACTTTAAAGTGTGTAGGATATGTCTAGCGATGGATGTGAAAATGCAAGACTTGCGAATGTTCCCGTGGAATATTTATTTTGAACCTACCTTCAATCTAACTCGGGAACTCATTGAAGAAGTAAACAGAAAAGACATGAATTTGGAATCTAAGCTGGGACCACACTTGATCACGGAGAACTCTTTCATAAATGTTTCTTACTCCGAGCCTAATGTAAAAGATGAACCTAAGGAAACTGAGGATGAAAAAGTATTTAATGGTAGCATAGATACCAAGATTCTCTTTGAAGATGCTGTTTATGATGATCTCCCTTTAGGTGGCCTTTCAACTGATGAGGATGAACCATTATCCCTGCATAAAAGAAACAAAGAGAAGAAAGTTAAAGTAAAGAAAAAGAATAAGAGAGTTAAAAAACGGTCTGAAGAAAATACTGTGGATGAAGTTAAGGTAGTTTTTAGCAACATTACTATGGACTCTGAGGGCACTGCTAGTTTTACTATGTCATTGAGTACAAGAAACTTGCAACTTTGTAGCGAGAGCATGCCTAAGGCGCACTGTCGGTGCACCACCGGCGCACCACCGGCGCACCGCCGGCGTGACCGCCGGCACGCCGCTGCACAGCACAGTCCGCTGCCATCGATTGCGTCGTCCAGCCAAAAAGTGTACCACGGGGGCGCTCGAAGCGCGCCTCGGGCGCACCCGAAGCGCGCCGAGCCCGAAGAACCAAAACACTTACTTACTTTAGAAGTGACGTTTGAAGAAATGCTGTCACAGACCGACGACCCACCTCGAGTAAAGAATAAACGTGGACGTCCGAGAAAGACACAGATAAAGGCTGAGGCGAGTGCGAGCGGGACGAAACCACATCGACGAACGAAGAATACAGGCGGGGTGGTCGACGATGATGACGCAGATTTGGAGGAATATTGCACTATTATTAAACTTACGGACCAAGAACAATTAGAGGAGATAACAAAACGGCAAACGTCTTCAAATTACCTGAACGCCTCGTTCCAGTGTAACCTGTGCTTCAAAGGCTTTATCGACACGCACGCGTGGAGGCATCATGTGGGGAAACACGACCCGAGTGCGGGAGATGTGGAATGTCCCATCTGCAAGTTCCGTTTTAAGACGAAGCGAGCTCTACAGAAGCACGCAGCGAACCACGAGAAGAAATACGCGTGCAAATCCTGCCCTTATGTGTCCAAAACTACCACTCAAGCAAAGCAGCATCAAAGGTGGCATAAAGGTGTCACGTACAAGTGCCAGTATTGCGATGAAGTATCTACTAAATGGACGTCTTACCTGTCGCACGTGCGCATCAAGCACCCCTCGGAGTTCATCTGCGGGATCTGCGGGTACTCCTTCGTCAGCACGCTCGGACTCACCATGCACAAGACTATGATGCACAAGGATGTTGCTGAATCAGAAACATCCAGCAATCAAGAGGGTCCATACTGTGAGGAATGTGACGTTAAGTTCATTTCGTTAGAGGCCTACAAGCGGCATATGGTCACTTCGGCTAAACACATGCAGAATGAAGACTTCAAGACGGGTTGTCGCGTTTGCGGTGAGAGCTTCAAGTCAGGCGAGGAACTAAGACTGCATCACAGGAGAGAACACGCGAGGAAACGACCCAAGAACTACGGCAAAAAACCCCCCATACAATCCTGGCCGGCGCAGTGCGAACATTGTCCGGAAACGATCCTGAACGCGCGTGATTACTGGACGCACTTCAGACGCGCGCATCCCGACAAGAGTTACCCCATACAGAAGAACCACGTTTGTGATATCTGTGGAAAGAGCTTCAGGGGCAACGCTTTCCTCGTGTACCACAAGCGGACGCACTCCTCGGAGCGCAACTTCAAGTGCGCGCGGTGCCCCAAGGCCTTCTTCAACCGCACCAACCTCCAGATGCACGAGAAGACGCACTCCGACCACCGCCCCTACGCCTGCACCATATGCTTCAAGGGTTTCAAGTGCAAAGGGGCTTTGGATAGACATTTTCGAAGTCACACAGGTGAAAAGCCCTACGAGTGTGAAGTGTGCGGCAAAGCGTTCGGCCAGTCCAACAGTCGCAAACTTCACGTCAGAACGGTGCATCTAAAACTACCCGCACCGTACGTCAGTCGCGCGCGACAGGAGAGAAAGAAGAACCACAATATCGACATGGCCTCGCTTGTCAAAGTCGACTGCTCAGAGCTCATAGCGTTATAG
Protein Sequence: MDDFKVCRICLAMDVKMQDLRMFPWNIYFEPTFNLTRELIEEVNRKDMNLESKLGPHLITENSFINVSYSEPNVKDEPKETEDEKVFNGSIDTKILFEDAVYDDLPLGGLSTDEDEPLSLHKRNKEKKVKVKKKNKRVKKRSEENTVDEVKVVFSNITMDSEGTASFTMSLSTRNLQLCSESMPKAHCRCTTGAPPAHRRRDRRHAAAQHSPLPSIASSSQKVYHGGARSAPRAHPKRAEPEEPKHLLTLEVTFEEMLSQTDDPPRVKNKRGRPRKTQIKAEASASGTKPHRRTKNTGGVVDDDDADLEEYCTIIKLTDQEQLEEITKRQTSSNYLNASFQCNLCFKGFIDTHAWRHHVGKHDPSAGDVECPICKFRFKTKRALQKHAANHEKKYACKSCPYVSKTTTQAKQHQRWHKGVTYKCQYCDEVSTKWTSYLSHVRIKHPSEFICGICGYSFVSTLGLTMHKTMMHKDVAESETSSNQEGPYCEECDVKFISLEAYKRHMVTSAKHMQNEDFKTGCRVCGESFKSGEELRLHHRREHARKRPKNYGKKPPIQSWPAQCEHCPETILNARDYWTHFRRAHPDKSYPIQKNHVCDICGKSFRGNAFLVYHKRTHSSERNFKCARCPKAFFNRTNLQMHEKTHSDHRPYACTICFKGFKCKGALDRHFRSHTGEKPYECEVCGKAFGQSNSRKLHVRTVHLKLPAPYVSRARQERKKNHNIDMASLVKVDCSELIAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -