Amou033916.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- zfy1
- Assembly
- GCA_947532105.1
- Location
- OX383964.1:26353014-26369837[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 4.7e-07 5.6e-05 24.6 2.6 2 23 173 194 172 194 0.97 2 11 7.9e-05 0.0093 17.6 3.6 1 23 200 222 200 222 0.99 3 11 0.00035 0.041 15.6 5.1 2 23 229 250 228 251 0.95 4 11 1.9 2.3e+02 3.8 1.7 5 23 264 282 262 282 0.96 5 11 0.00024 0.029 16.1 1.9 2 23 288 310 287 310 0.96 6 11 0.0042 0.5 12.2 0.2 2 23 327 347 326 347 0.97 7 11 3.8e-05 0.0045 18.6 2.6 1 20 353 372 353 375 0.92 8 11 0.00046 0.054 15.2 0.4 1 23 383 405 383 405 0.98 9 11 0.0018 0.22 13.3 7.2 1 23 411 433 411 433 0.98 10 11 2.1e-06 0.00025 22.6 1.3 1 23 439 463 439 463 0.98 11 11 0.00031 0.037 15.8 5.5 1 23 469 491 469 492 0.96
Sequence Information
- Coding Sequence
- atgcgcactacggggctagctctgtgtttctcagcaggagagtacgcgtgtcaagtatgggctaggtcagctcacactagagaggtggacgcggagctaaatgacacctgccgcatcgtgactggctgtcttaagccaactccggtcggtatgctgttccctcttgcgggaatagctcctcccagagtccgtagagaagggacctgttcgctagaaaaacaaaaacaggaaagcgatccgagacattcactctacgggctctctcccaccgcaggtcggttgcgaagccgcaaaagcttcctgcgatccacacagcctaccgaccaaaacccttccgacgtgaggtgcagactttgggcaagcgagtacccacattcactgtacccccccaacgaaaacctgcctcctggctataaggaaccttggccaacctggagaagtctaaataggctgaggacccagGAGGACCAGGGCTCCGAGGCAGGCTTAACAGCACACCGCTCACTTCACCCGCTGGAGTGTCTCACGTGCGGAAAGTGCTTCCGGCGACGGGCCAATCTACAGCTACATATCAAGACGCACTTCGGCATTAAGAACTACAAATGCGACGTGTGTGAGAAGCGGTTCATCACGCGGCAGAAGCTGTCGGAGCACCACAACACGCACACCGGCCGCGCGCCCGTCAAGTGCACGCACTGCGACCAGGCCTTCCGCCGGTACTCCAACATGCTTCAGCACAGGGACCGCCACCACTTCCACAAGAAGACCAAAATCCGCGACTTTGTGTGCCATTGTGGCGCCATCTACCACTCGCGTGCTAAACTTCTGTGGCACAAGGAGACCCACGACGAGAAGCCCAAGTCTTGCCTCTACTGCAGCGAGAAGTTCATACATGCTGCGTCTCTGACCAGACACGTGCGCCGGTCGCACAATGAGTACTACGTCAATGAAAAATATAAGGGAAAAGCTGAGAATGTATCCTGTCCTGTTTGTAAGCAGGTATACCTGCGAACGAATCTGCGAGCGCACTTGCTAACCCACAGCGGAAAGCGCCCCTACCACTGTGTCATTTGCAACAAATCTTTCACCACAAAATGGAACCTGAAACTTCACCGCTGGACGCACATGTCGCGATCCTCCAAACCATTCAAATGCTCCCTCTGCAAGGGCGCATTCATACGACAGACGGAATACATTTCACACATGAACGCTCACAAATCAGTTCGCCCGTACACTTGCAACTACTGCGGCTGCCAGTTCATAAGGAAATACAACTGTCAGAGGCATGTGAGAGAACACGAAATGGCCAAAAAGTACGTGTGCAAAGTACCGGAGTGCGGTAAGTCGTTTCATAGGAGTTATTACCTCTCTGAGCATATGAAAGTGCACAGTGGGGCGAGGCCGTTCTCCTGTTCCATCTGCGGGAAAACTTCGAGTAATAAGTCGAATCACAACAAGCATTTGAAGATACATCACGCGCGTGAGCCTATAGCGACTGAGGCGTAA
- Protein Sequence
- MRTTGLALCFSAGEYACQVWARSAHTREVDAELNDTCRIVTGCLKPTPVGMLFPLAGIAPPRVRREGTCSLEKQKQESDPRHSLYGLSPTAGRLRSRKSFLRSTQPTDQNPSDVRCRLWASEYPHSLYPPNENLPPGYKEPWPTWRSLNRLRTQEDQGSEAGLTAHRSLHPLECLTCGKCFRRRANLQLHIKTHFGIKNYKCDVCEKRFITRQKLSEHHNTHTGRAPVKCTHCDQAFRRYSNMLQHRDRHHFHKKTKIRDFVCHCGAIYHSRAKLLWHKETHDEKPKSCLYCSEKFIHAASLTRHVRRSHNEYYVNEKYKGKAENVSCPVCKQVYLRTNLRAHLLTHSGKRPYHCVICNKSFTTKWNLKLHRWTHMSRSSKPFKCSLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCSICGKTSSNKSNHNKHLKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -