Amou039450.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383984.1:7510674-7513680[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.00013 0.015 17.0 0.1 2 23 19 41 18 41 0.94 2 17 0.075 8.9 8.3 0.4 2 23 67 89 66 89 0.88 3 17 0.19 23 7.0 0.2 2 23 112 133 111 133 0.96 4 17 1.1e-05 0.0013 20.3 1.1 2 23 138 160 137 160 0.95 5 17 0.27 32 6.5 0.2 3 20 167 184 165 186 0.93 6 17 0.022 2.6 9.9 1.1 2 23 215 238 214 239 0.93 7 17 1.9 2.3e+02 3.8 0.0 2 22 265 285 264 287 0.85 8 17 0.098 12 7.9 0.1 2 23 310 331 309 331 0.96 9 17 0.00014 0.016 16.9 0.8 1 23 335 358 335 358 0.94 10 17 0.18 21 7.1 0.1 3 20 365 382 364 384 0.94 11 17 0.12 15 7.6 0.2 1 14 391 404 391 408 0.85 12 17 0.011 1.3 10.9 0.2 2 23 429 451 428 451 0.92 13 17 0.24 28 6.7 0.1 2 23 523 544 522 544 0.96 14 17 0.00016 0.019 16.7 0.8 2 23 549 571 549 571 0.95 15 17 0.56 67 5.5 0.1 3 20 578 595 577 597 0.94 16 17 0.0096 1.1 11.1 0.8 1 23 604 627 604 627 0.91 17 17 2.6e-05 0.0031 19.2 0.8 1 23 634 657 634 657 0.96
Sequence Information
- Coding Sequence
- ATGATAGTGAAGTATACAACAGCCTATCCATTCAGAATTCCCGATTTATCAATGGTCTGTGCTTACTGTGAGGAGAGCTACAGCGACCCTGCAGAGTTCAGGCGGCACATGGAAAATGACCATCTAACTTTCGAAACGCATCCCGCATTTCGAAACATCAGTTTAGATTGCTTCATTAAAGTTGACTGCACAGACTTACGCTGCAGAATGTGCTCCAAACAATTCAGCGACATTGATTCTATCGCGCACCATTTAGTAGAAGCACATAAAAAGCATCTACATTTGGACTCTAAATGTGGAGTACAACCATACATATTTAAGAATAACGATTGGCAGTGCGTTGTATGCCGTTATAAAGCTCCTTCTTTGAGGGCTTTGACGAGGCACACTCAACTTCACTACGTGAAACAGACTTGTGAAACTTGTGGTAAAACTTACTCTACGAGGAGGAATTTGAAAGACCATGTTTCAAAAGCACACTTGGGAATGAAAGATGCTTGCCGCAAATGCAAAAAGCCTTTAAAAACTTCTGAAGAAAGGCGGTTGCATATGGAAGAATCTCAAAGCAGCACGAGAAACAACGCTAAGGCGATAGTGGAATATACAACAGCCTATCCATTCAGAAGTCCTGACACCTCGATGGTCTGTTCTTACTGTGATGAGAGCAAGAACTACAACAACCCTACAGATTTTAGGCAACACATGGAAGATCATCATCAAGCCTTCGAAACGAATTCGGCATTTCGTCACATCGAATTCGATGCCTTCATTAAAGTCGACTGCACAGACTTACGCTGCAGAGTCTGCGCCAAACGATTCGGCGACGTCGAATCTATCGCGCAGCATTTAGTAGAAGCACACCAAAAACCTATAGATTTGGACTCTAAACTTGGAGTACAACCATTCATTTTTTACAATAACGATTGGCAGTGTGTTATATGCAGTCTGAAAGCTCCTTCTTTGAGGGCTTTAACCAGACACACTCAAATTCACTACGTAAATTACACTTGTGGCACTTGTGATAAATCATACTCTACGTCGAGGAGGTTGAGAGTACATGTTTTAGAAACACACTTGGGAATGAGAGAGGCTTGCCGCAAATGCAAAAAGCCTTTAAAAACTCCTGAAGAAAGGAGAGTGCATATGGAGGAATCTCCTATATGTCGTCCTTATTTATGTACCATATGTGGAGAAAGATTCACAGAGAACAGCACGAGAACCAACGCAAAGATTATAGTGGAATATTCAACAGCCTATCCATTCAAGATTCCCGATATCTCAATGGTCTGTGCTTATTGTGATGAGAGCCACAGCGACCCTGCAGATTTCAGGCGACATATGGAAGATGACCATCAAACCTTTAATACGTATTCGGCATTTCGTCACCTCATCGATTTAGATACCTTTATTAAAGTTGACTGCACAGACTTGCATTGCAGAATCTGCTACGAAAGCATCAGCGACGTTGAAACCATCGCGCAGCATTTAGTAGAAACACATAAAAAACCTATAGATTTGGACTCTAAACTTGGAGTACAACCATACACTTTTAACAATGAAGATTGGCAGTGTGTTGTATGCCGTCTTAAAGCTCCTTCTTTGAGGGCTTTAACGAGACACACTCAAATTCACTACATAAATCGGTCTTGTGAAACATGTGGTAAATTTTACTCTAATTCCAGGAGGTTGCAAGTACATATTAAAAACGCACATATGGGAATGAAAAACGCTTGCAAAAAATGCAGAAAACCTTTAAATACTCTCGAAGATAGAAGAGTACATATGGAGGAATCTCGTATATGTCGTCCTTATTTATGTAATTTATGTGGAGAAAGATTCACAAGTACTAACCAAAAAGAAAATCACAGGAATGATGTCCACGGAATCAATAAAAGAACTTACCCTTGTCCTTACTGTAAGATCGTATTAAGACAAAGCAGTAAGTTAAAGAAGCATATCGATAAAAAACATGTTGAATGA
- Protein Sequence
- MIVKYTTAYPFRIPDLSMVCAYCEESYSDPAEFRRHMENDHLTFETHPAFRNISLDCFIKVDCTDLRCRMCSKQFSDIDSIAHHLVEAHKKHLHLDSKCGVQPYIFKNNDWQCVVCRYKAPSLRALTRHTQLHYVKQTCETCGKTYSTRRNLKDHVSKAHLGMKDACRKCKKPLKTSEERRLHMEESQSSTRNNAKAIVEYTTAYPFRSPDTSMVCSYCDESKNYNNPTDFRQHMEDHHQAFETNSAFRHIEFDAFIKVDCTDLRCRVCAKRFGDVESIAQHLVEAHQKPIDLDSKLGVQPFIFYNNDWQCVICSLKAPSLRALTRHTQIHYVNYTCGTCDKSYSTSRRLRVHVLETHLGMREACRKCKKPLKTPEERRVHMEESPICRPYLCTICGERFTENSTRTNAKIIVEYSTAYPFKIPDISMVCAYCDESHSDPADFRRHMEDDHQTFNTYSAFRHLIDLDTFIKVDCTDLHCRICYESISDVETIAQHLVETHKKPIDLDSKLGVQPYTFNNEDWQCVVCRLKAPSLRALTRHTQIHYINRSCETCGKFYSNSRRLQVHIKNAHMGMKNACKKCRKPLNTLEDRRVHMEESRICRPYLCNLCGERFTSTNQKENHRNDVHGINKRTYPCPYCKIVLRQSSKLKKHIDKKHVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -