Basic Information

Gene Symbol
Znf711
Assembly
GCA_947532105.1
Location
OX383967.1:7196292-7210436[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00021 0.025 16.3 1.7 1 23 253 275 253 275 0.99
2 11 0.001 0.12 14.2 1.3 1 23 282 304 282 304 0.98
3 11 5.6 6.6e+02 2.4 0.3 1 9 308 316 308 331 0.75
4 11 1e-07 1.2e-05 26.8 2.6 1 23 337 359 337 359 0.98
5 11 0.00011 0.013 17.2 0.5 2 23 366 388 365 388 0.95
6 11 1.9e-05 0.0022 19.6 0.3 1 23 399 421 399 421 0.95
7 11 0.002 0.24 13.2 1.6 1 22 427 448 427 452 0.92
8 11 0.00069 0.082 14.7 1.6 2 23 461 483 460 483 0.95
9 11 2.1e-05 0.0025 19.5 0.3 1 23 489 512 489 512 0.98
10 11 1.4e-05 0.0017 20.0 1.5 1 23 521 543 521 543 0.98
11 11 0.013 1.5 10.7 0.0 1 23 549 572 549 572 0.95

Sequence Information

Coding Sequence
ATGGAGGAAACATTTCCACTTCCGAAAACTAGTTACTGCATTAGTTGTTTGTGTAAAAACGATGATGTTCAAGTTCACCTATATCAGGTGCTAAATGAGACACTAAAAGTTATTTTTCAGGGGGACCAAATCACACTGTGCTTTATATGTAAGAAAATAGCGCAAACTACAGAAGCTTTTATACAGAATGTTCAAACCAATCAGGTCTTATTGGAAAGCTTTGAGGTGGTCACAGAAACAAATATACACACAATAAAATCTTCAATACAACCAATAGTCAACCTGGCTCAAATTCCTTTGTCACCTATAAAGTTGGATGGCAATGATTCTAATAACGATAATAATGTTGTTATTTATAATAATAAAAGAGATGTAAAAGTGAAAGTGGAAGTCAAATGTGGGGATGGCGATCGAGAAGATGATAACAAAGATGATGAAAATGATTTCAGTGCATTCTGTGAGAACGATTATAGTTTAGAATTCAAAAATTTAGAAAACTCTATTAAAGAAGAGGAAGATGATTATCCCCTGCAGTTGCTGAAACAAGAGTTAGAATCTGAAGGAATAAAAATAAAAGTGAGAAGAAAATATACAAAGAAGAAGCCTAAGTTACTAAAGAAAATAAAAAGCAAGAAAGAGATCAGTCAAGACTTTAATGTACCAGAAGCGAGAATCCAAATCTTGCACCTTACTCAGCAGGAATGTTTACAAGAGCGGTCACAAAAACTTTTGGAGGAATCTTATATAAATTCAGAGTACAAATGCGAAGATTGTATCAAAGGCTTTAGCTATAAATCTTCTTATGACAAACATATGGAAAAACATGACGAGAGGTATGGCGACTACGTCTGTGATGTTTGTAAACTACGAACTTCAACTGAAGACAAGTTACAAAGCCATAAGAGATACCATACCCTGAGATTTAAATGCTTAGATTGCGGCTTAACGAGATTAAATCGGCTTACAATAGAAGACCATTTTAGATCTAAACATTCCAATAGCATACACTTTTCCTGTCCAGAGTGTTACAAAAATTTCCGGCGAAAATCATCACTCAAAAATCACATGCTCACACATAAACACAAGGAAAAAGTGGAGTGTGGTCATTGTAACAAAGCCTATGCTTCCAAAGAAACGTTGAAAGCCCATGTTGAAAGAAGACACTCAGATGAAATAAGTAAACGAGAAAAAAGGCATATCTGTCAAGAATGTGGTATGGCGTTTGAGAACCCTTCGCAATTGAAAAACCATGGCATTAAGCATTCTACCAGGAGGGACTACTATTGCGTCGAGTGTGACAAGAGTTTCAAATCGGACTATATTTTGAAACACCACCTTAAAACTGCTAAGCCTCACAATAACTACATGGATTTACCCTTACCCTGTCTTCATTGTAAGAAACGTTTCGCAATCCGCAGAGACCTAGACAGACATATGAACAGAGTTCATCTCAATATCAAGCCTTTCCAGTGTGATCAGTGCGAAAAGACATACATTAACAACTGGTCACTTATTGAGCACCGCCGTATAATTCATGAAGGATACCAACGCCCACTCAAGTATCCATGCTCCTTGTGCGATAAAGTATTCGATCGAAACCACATACTGAAGTCGCACATCCGCACGCACACCGGCGAGCGTCCCTACCAGTGCAGCCGGTGCCCCGCCGCCTTCAGCCAGGCCGGCGTGCTGGGCACACACGTCAAACTGGTCCATCTCAAGCTCACCAGAGATGGGAAGCCTAAAGCTACTAGTATAGGACCTGTCGGGCTTGGTATAATGAAAATGTGA
Protein Sequence
MEETFPLPKTSYCISCLCKNDDVQVHLYQVLNETLKVIFQGDQITLCFICKKIAQTTEAFIQNVQTNQVLLESFEVVTETNIHTIKSSIQPIVNLAQIPLSPIKLDGNDSNNDNNVVIYNNKRDVKVKVEVKCGDGDREDDNKDDENDFSAFCENDYSLEFKNLENSIKEEEDDYPLQLLKQELESEGIKIKVRRKYTKKKPKLLKKIKSKKEISQDFNVPEARIQILHLTQQECLQERSQKLLEESYINSEYKCEDCIKGFSYKSSYDKHMEKHDERYGDYVCDVCKLRTSTEDKLQSHKRYHTLRFKCLDCGLTRLNRLTIEDHFRSKHSNSIHFSCPECYKNFRRKSSLKNHMLTHKHKEKVECGHCNKAYASKETLKAHVERRHSDEISKREKRHICQECGMAFENPSQLKNHGIKHSTRRDYYCVECDKSFKSDYILKHHLKTAKPHNNYMDLPLPCLHCKKRFAIRRDLDRHMNRVHLNIKPFQCDQCEKTYINNWSLIEHRRIIHEGYQRPLKYPCSLCDKVFDRNHILKSHIRTHTGERPYQCSRCPAAFSQAGVLGTHVKLVHLKLTRDGKPKATSIGPVGLGIMKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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