Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_947532105.1
Location
OX383956.1:11066578-11102338[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-14 2.6e-11 44.7 0.1 3 44 563 604 561 606 0.95

Sequence Information

Coding Sequence
ATGATGGAGATAGAGAACGCGTTAGTAGCAGCTGAACTGATCCGCGCGCCATGCGTCTACATCCGCCCCGATGTGGACAAAGCTACTGCCAACAAAGTGAAAGATATCGTCGTCAATCACCAAGGAGAAGTTTGCGAGGACGAAGAGGACGCGACACACATAATCTACCCGGCGGTGGACCCTTTAGAAGAGGAGTACGCTCGGCCGGTGTTCCGCCGCGGGAGTGGAGTGCTGGTACACTGGTACTACCTGCCCGACAGCCACGACACCTGGGCGCAGGCTGAGCTGCCGGTGGATGTGCCCGAAACGGTTAGCTGGGAATGTATCCGCGGGGAGCCGTGGCGGTTATCGGCCACGTGGGCGCTTGATCTGCCGCAGTACAACGAGTGGATGAACGAAGAGGACTATGAAGTCGACATCAGCGGCAAGAAGAAGGTCCACAAGTTGCGGTTGTCTGTTGACGACTTGCTCCCCGGTGCGGAACCCGCGGGGAAGGGCAAGAAAGGCTCCAAGAGAAAACGGTCACCATCGCCACCGCCGCAGAAACACGGCAAGAGAAAAAGTCGAGTTTCGAAGCGTCGCGAGAACGAGGGCGAGGACGAAGACGATAACGCGTCTCGCGACAACACGGATGCTGTGCCCACGCCGGACACGGAACGGTCCGCCGACACGCCTGCCGCGACGCCGATGGAAGCGACCCCTAGCGCCGCGCCCAGCGCAGAGGCTCCAGCGACGCCCGCGCCCCCTTCCGACGTGCATGACGACTCACAAGGGAAACACAGTGACTCTAATACACAGGAAATGCTGACGAAGGAAGAGCTAGAAGACAACGTGACAGATCAGACGCATCACATAGTGGTCCCGTCTTATTCGGCGTGGTTCGACTACAACTCGATACACACAATAGAGAAACGCGCTCTACCAGAGTTCTTCAACGGAAAGAACAAGTCTAAAACTCCTGAGATCTACCTGGCTTACAGGAACTTCATGATCGACACATATCGTTTGAACCCGACGGAGTACCTGACGAGTACGGCCTGTCGCCGCAACCTGGCCGGAGACGTGTGCGCTATAATGCGAGTGCACGGCTTCCTCGAGCAGTGGGGCCTTATCAACTACCAGCTGGACGCGGACTCCCGGCCGACGGCGATGGGTCCGCCGCCGACGTCTCACTTCCACGTGCTCTCGGACACGCCGTCCGGACTGCAGCCTCTGCAGCCGCGCCCGCCGCAACCCAGGCCTGAGCGTGGCGTGTCACCGGCGCCGGCGGCACGCGCGCGTCTAGATAGTAGGCAGCGGTGGCTAAAACGCTACCTACTATCTACAGGGGAAATTGAAGTCATTCGACAAATTTTGAGACTGAGTTCAGACTGCGAAAATGAACAATTTTCGCCTAGGAATATAGGTTACTGCACTTTCAGACGCGCGTGTGTCGCCGGCGCGTGCCACACGCCACGCTCTGAAACCAACCTTACTTACGTTGTAGCCGAGAACGCGGCCGTCCCGAAGGTGGAAGCAGGTCTGCCTAACGGGTCGGAGGTGGGGGTTCCCCCGGGAGCCGCCGCCGCCGCAGCCGCCGCCGTGGCCGCCGCCGCCACGGCTCAGGTCAAGACCGAGCCCACCATCGAACTGGGCGGGGTGCCTGGACTCAAGGTGGACCAGTACCGAGGCGGCCAACGCGGCCGCGAGTGGACGGAACAAGAGACGCTGCTGTTGCTAGAAGCGTTAGAGCTGCACCGAGACGACTGGAACCGCGTGGCTGCCCACGTCGGGACTCGCACCCACGACGAGTGTATCCTGCACTTCCTGAGGCTGCCCATCGAAGACCCCTATCTCACTGATGCGCCGTCAGGTGGAGTATTAGGCCCGCTGGCGTACCAACCGATTCCATTCAGCAAGATGGGCAATCCAGTGATGAGTACGGTCGCGTTCCTAGCGTCCGTAGTGGATCCACGCATCGCCTCAAAGGCGTCCAAAGCCGCTATGGAAGAGTTCGCTGCGATCAAGGACGAGGTGCCGGCGGCGATGATGGAAGCGCACGTGAAGGCGGCCGGCGCGCACGGCCCGGCCGCCGCGCTCGCCGCTACCGGCATCGCGGGGACCGCGCCCGAACTGGAGCCCACACCTACAGCTACAGAGAAGAAAGAAGGTGTCGAGGGAGTGAAATCGGAAGCGATGGAGGTTGAGGAGGGTGAGCCGCAGGCGCCGAAGATCAAAGAGGAGGCGAGTGAAGCGACCGCGCCCACGGAGGAGCCTAAAGAAGCGACTGTCAAGGAGGAGTCTGCTTCACCACAACCAGCGGAATCAACGCCGACGACAGTGGACTCGAAGCTTCAATCGGCGGCGGCAGCAGCGTTAGCGGCGGCGGCAGTGAAAGCGAAACACCTGGCCGGAGTGGAGGAGAGGAAGATCAAGTCTTTAGTGGCTCTGCTCGTTGAGACACAGATGAAGAAACTCGAGATCAAGCTGCGCCACTTTGAGGAGCTCGAAGCCACTATGGAGCGCGAGAGAGAAGGTCTGGAGTACCAGCGGCAACAATTGATTCAGGAGAGGCAGCAATTCCACCTCGAGCAACTGAAGGCGGCCGAGTTTCGCGCGAGACATCAGGCCCACCAGAGATTGCAAGCGGAGAGTGGAGGCGGCCCGCAGCCGGCGGGAGCGGGAGCCCCGGACCAGCCGACCGCGGAGGCCCCGCCCTCCGCCCCGCCCACGCACGCCTAG
Protein Sequence
MMEIENALVAAELIRAPCVYIRPDVDKATANKVKDIVVNHQGEVCEDEEDATHIIYPAVDPLEEEYARPVFRRGSGVLVHWYYLPDSHDTWAQAELPVDVPETVSWECIRGEPWRLSATWALDLPQYNEWMNEEDYEVDISGKKKVHKLRLSVDDLLPGAEPAGKGKKGSKRKRSPSPPPQKHGKRKSRVSKRRENEGEDEDDNASRDNTDAVPTPDTERSADTPAATPMEATPSAAPSAEAPATPAPPSDVHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLDADSRPTAMGPPPTSHFHVLSDTPSGLQPLQPRPPQPRPERGVSPAPAARARLDSRQRWLKRYLLSTGEIEVIRQILRLSSDCENEQFSPRNIGYCTFRRACVAGACHTPRSETNLTYVVAENAAVPKVEAGLPNGSEVGVPPGAAAAAAAAVAAAATAQVKTEPTIELGGVPGLKVDQYRGGQRGREWTEQETLLLLEALELHRDDWNRVAAHVGTRTHDECILHFLRLPIEDPYLTDAPSGGVLGPLAYQPIPFSKMGNPVMSTVAFLASVVDPRIASKASKAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPELEPTPTATEKKEGVEGVKSEAMEVEEGEPQAPKIKEEASEATAPTEEPKEATVKEESASPQPAESTPTTVDSKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGGGPQPAGAGAPDQPTAEAPPSAPPTHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-