Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_947532105.1
Location
OX383980.1:13803405-13805819[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.9 6.6e+03 -1.4 0.0 22 40 232 251 229 256 0.80
2 5 7.4e-10 1.7e-06 29.3 0.4 2 45 264 309 263 310 0.94
3 5 5.1e-09 1.2e-05 26.6 0.3 2 44 317 363 316 365 0.94
4 5 4.3e-11 9.7e-08 33.3 0.0 1 43 369 411 369 412 0.98
5 5 2.5e-06 0.0056 18.1 0.0 4 45 423 468 422 469 0.92

Sequence Information

Coding Sequence
ATGTCGGACTCCGACTCAGATAGTTCTAGCTATTACACAGACGAAGAAGCCCATGAAGAAGAACTGAGACAACTTAAGGCGGTTTTGGAGGTGGACAGTTCTTCACAGAACGATGGATCGGATCGAGGCTCGGCAAGTACTTCCCGACTCTCTCAAGCAAGTTCGGCCAAAGATCAATTGAATCACGTTCAGAATGCATTAGCTTTCAACAAGGTTACAGAAGAGAAACTTTGTCGGCTGGAAAAGGTATTAGTTGCACGTTTACGAGAATGCCGACAGCGGCTAAGCGAAATCCACATCACTCCTTGGCACCAGAAGTCAGACAGGCAGTTAATATTTAGATATGTGTATTGTGGCAAACCCTACTTCCGAGACAGAGACAACTTTCCACCACCAGATAATGTAGACACTCTTACTATGGAGAAATCTGGAATGTACGATTTTTCTGATGTTGGAACAGTAGCAGGCTGGACTGTAAAAGACAAATCAGAATTCCTACAACAATTACTCAAAATGTCTCAAAAAATTAAAAAAGAGCAGTTAGAATCCCAACTTTCTGAATTGCATAGACAAAGTAAAAAGAAAGATTCAAAAATCATGCAAAAAGATATCATTCAAATAAAGAATCAAATTGATAAAGTAAAGACTTTGCCGTTAAATGAAGAAGTTGTTCTGCCACTTGATAAGGAATATGATTGGGATGCTGTAGCTGTTGCCTTGAATCATAGACATACTCCTGAAGAATACCGATCCCTCTGGAAACTTTTCTTGCACCCATCCATAAATAAAGAAGGTTGGAATAAAGATGAACATGCCAAGTTACATGAAATTGTAGTGAAAAACCGGTTACAAAACTGGGAGAAAATTGCTGCAGAACTTAATACAGGCAGAACTGGCTATCAGTGTTTTGTTTACTATCGCACTAACATGGGTAATACAACCACTGGGCAGAGATGGACAAAAGAAGAGGAAGAATACCTGCGAAGGCTTATTGAATATTACCGAGAAGATGAGTACATTCCTTGGGGTAAAGTAGCAGCCTCTATGGAAAATAGGACAAAAATTCAAATCTACAACAAATATGCCAGGCTCATGGAGTTACGGAAAGGCAGGTTCCTACCTGAAGAAGATGCTGTGATCCTCTCAGGAGTACAAAAATTTGGAATAAACTTTAGAAAAATTACAAAATACTTACCAGGACGCTCTATTGCTCAATTGCGCACTCGCTATCAAATATTAAGCAACAAAACACAGACTTCAATTGTTTGGACTGTTGAAGAGGACAGAAAGTTGATTCAGCTAATGGCTAATCAGGATACTGCTCAATATGTAAATTATGCTGCTATTACAAAGTTTTTCTCTGGAAAAGATAGAAATCAGTTGCGAGCCCGATATGTAACTCTTGTCAAATGGATGAAAAGACATCATGATAAGGACATTTCATGTGCTCCAAGACGCGGCGCACGGCGTTTACTCCATGGGAAAGGACATCAAGATCTGTCCGATGCCCTTGAGAACTTGAAAAATAGAATAAAAAATGAGATTGATACTAAAAAATCAAAAAAGATAACAAAGGACTCCCCAGAAGATGTAATTGAGCATGCTATAATTACAACATTGATCAATGAACATATGCAGGACGAAGATATTAGAAGACAGTGCCCTGAAACTGATATTGATTCTGATGAAAATGCAGCAGGACCATCCCAAGCAGTTAATGAAGTAAATCTCCGCAAGTTACTAATTTTATTAAAAGCACAACTTGACAAACCTGAGTTTGAATCAAGCCCCTTAGCATCAAAATACCCAGGACTGCTAGAATCGGAAGTTTTACCTAGCTGTTTCAAAGTCAAGTCTTACTCAAGAAAAACTCCACAAAAATTATATGTAAACCCTAACATGGCTCCTCCTGACATTTGGGGTAAAAATAAATTAGTAGGTGCAGAATATGTGCTACCTCCAAATTATTCAACCATTACTGGCTGCAGAAGACTTATGGCATTGGCAAGTAAATATCCTCCAGACAGCAACAATCGGGGCCCAACTCTGCATCAATATGTAAAAAAAAATGCTTCTATGAAAGAGCAAGTGGCCCAATTCATGGAAAGGTTCAATATTTTATTCTTGTGGCCGATGTTGCTATCTAATGAAGGTCCGCGGGAACAACCTAACAATCTTCCAATTTGTATTGCAAAAAATATGAGATTGAGAGAATTACTTGCTACGCCACTGGGCGTTGGCGTTGCTATACCAAATGCACATAGGTCACATTTTTATCCACAGGACCAGATTGACTTGGATTCCACAACCGATGACAATGTTGCTTTGAGACCATTAGTGGGAAATGATGATTTCATGTATATCGAAGGTGATTTAGATGACTCAGAGCATGATCTGGACATTGACAGCAGCTAA
Protein Sequence
MSDSDSDSSSYYTDEEAHEEELRQLKAVLEVDSSSQNDGSDRGSASTSRLSQASSAKDQLNHVQNALAFNKVTEEKLCRLEKVLVARLRECRQRLSEIHITPWHQKSDRQLIFRYVYCGKPYFRDRDNFPPPDNVDTLTMEKSGMYDFSDVGTVAGWTVKDKSEFLQQLLKMSQKIKKEQLESQLSELHRQSKKKDSKIMQKDIIQIKNQIDKVKTLPLNEEVVLPLDKEYDWDAVAVALNHRHTPEEYRSLWKLFLHPSINKEGWNKDEHAKLHEIVVKNRLQNWEKIAAELNTGRTGYQCFVYYRTNMGNTTTGQRWTKEEEEYLRRLIEYYREDEYIPWGKVAASMENRTKIQIYNKYARLMELRKGRFLPEEDAVILSGVQKFGINFRKITKYLPGRSIAQLRTRYQILSNKTQTSIVWTVEEDRKLIQLMANQDTAQYVNYAAITKFFSGKDRNQLRARYVTLVKWMKRHHDKDISCAPRRGARRLLHGKGHQDLSDALENLKNRIKNEIDTKKSKKITKDSPEDVIEHAIITTLINEHMQDEDIRRQCPETDIDSDENAAGPSQAVNEVNLRKLLILLKAQLDKPEFESSPLASKYPGLLESEVLPSCFKVKSYSRKTPQKLYVNPNMAPPDIWGKNKLVGAEYVLPPNYSTITGCRRLMALASKYPPDSNNRGPTLHQYVKKNASMKEQVAQFMERFNILFLWPMLLSNEGPREQPNNLPICIAKNMRLRELLATPLGVGVAIPNAHRSHFYPQDQIDLDSTTDDNVALRPLVGNDDFMYIEGDLDDSEHDLDIDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-