Amou029794.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383963.1:9981412-9982059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-08 2.7e-05 25.0 0.0 9 39 17 46 9 50 0.83
Sequence Information
- Coding Sequence
- ATGCCACGGAAAATTGGGAACCATTCGGCAGAAGAAATTAAGAATGGACTGAACTTAATCAGAAATGGTATGTCTATCAAAAAAGCTTCCGAGACTACCGGAGTTCCATTTACAACACTAAAAAGGTATTATAATAAAACTAAAACTTGCGACTCTCTGGAAAACCAAAGACTGGAACCAAATTATTTAGTAAATAAAGTCTTCACTTCCGAACAAGAGCAATCTCTAAAAGATTATTATATCTATTGTGCCTCTTTGTTCTATGAGTTGACAGCGATTGAGTGCCGAAAGATTGCGTTTCAATGTGCAGAGCGCAATAATATAAAAGTCCCGCGATCGTGGACTGAAACTAAAATGGCCGGTAAAGATTGGCTCATGGCATTCAGGAAGAGACATGATATTACACtcagaaaaccagaaccatgcagcctcgcgagggccacagcttttaaccacaataacgttcaaaaattctatgacaatttggagaatctcatcagtcgaaacccttcttttggagatggcacacggatcttcaatctggacgagacatcaactacaactgttcacaagcctcagaaggttatagctcctaaagggaagaagactgtatcaaaagttagtgtagtggagaaaggggcacattag
- Protein Sequence
- MPRKIGNHSAEEIKNGLNLIRNGMSIKKASETTGVPFTTLKRYYNKTKTCDSLENQRLEPNYLVNKVFTSEQEQSLKDYYIYCASLFYELTAIECRKIAFQCAERNNIKVPRSWTETKMAGKDWLMAFRKRHDITLRKPEPCSLARATAFNHNNVQKFYDNLENLISRNPSFGDGTRIFNLDETSTTTVHKPQKVIAPKGKKTVSKVSVVEKGAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00356124;
- 90% Identity
- iTF_00178088;
- 80% Identity
- -