Amou033789.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383964.1:24153210-24164036[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0013 0.49 11.4 0.0 2 37 72 107 71 115 0.83 2 3 0.0011 0.41 11.7 0.1 2 37 244 279 243 287 0.86 3 3 0.0013 0.49 11.4 0.0 2 37 341 376 340 384 0.83
Sequence Information
- Coding Sequence
- ATGTCACATGTAACGCTAAGACGATACGTTACTAATGCAAGAAACAGTAAGGAAGAAATAAAATATGCCCCTGATTACGCCAAAGCTAAAAAAGTATTTTCTACTGATGAAGAAAAGCAATTAGTACAGCATATTAAAACAGAACTGCAAGTATTCGTCAAGCCTAAACTATACAGACGCAAAAAAGGCGCACGGATAAGAATACCACCAGATCCTAACATACTTAAAACTGCTGTGGAATGTGTAATTCATAAAGGAAGTTCCTTGCGAAGTACAGCTAAAGCATATAATATGTCACATGTAACGCTAAGACGATACGTTACTAAAGCAAGAAACAGTAAGGAAGAAATAAAATATGCCCCTGATTACGCCAAAGCTAAAAAAGTATTTTCTACTGATGAAGAAAAGCAATTATTACAGCATATTAAAACTGAACTGCAAGAACGAACGATCGAGTTCATACCGACGAAACGAGGCAAATTTATTCTTCTCTGCGAGGGGTACACGTTTACTTGCAGGAATAACAACACCAGGTGGTACTGCTCTAAGAGTCCAAGTTGCCCGGTGAGAGTGCTTACGAACAAAGCAGGAGAGTACATCGAGTTACTAGGGACTCATAATCATCGACCACCAGCACTCTATAGGACGCCTAGTGGCAGTGTTGTTCTATTCGGCAAGCCCAAACTATACAAACGCAAAAAAGGCGCACGGATAACAATACCAGCAGATCCTAACATACTTAAAACTGCTGTGGAACGTGTTATTCATAAAGGTAGTTCCTTGCGAAGTACAGCTAAAGCATATAATATGTCACATGTAACGCTAAGACGATACGTTACTAATGCAAGAAACAGTAAGGAAGAAATAAAATATGCCCCTGATTACGCCAAAGCTAAAAAAGTATTTTCTACTGATGAAGAAAAGCAATTAGTACAGCATATTAAAAAAGAACTGCAAGTATTCGGCAAGCCTAAACTATACAGACGCAAAAAAGGCGCACGGATAAGAATACCACCAGATCCTAACATACTTAAAACTGCTGTGGAATGTGTTATTCATAAAGGAAGTTCCTTGCGAAGTACAGCTAAAGCATATAATATGTCACATGTAACGCTAAGACGATACGTTACTAAAGCAAGAAACAGTAAGGAAGAAATAAAATATGCCCCTGATTACGCCAAAGCTAAAAAAGTATTTTCTACTGATGAAGAAAAGCAATTATTACAGCATATTAAAACAGAACTGCAAGATGTTATCGAGTTCATGTATAATAGAAAGTCCCAAGCAAATCCGATCCTAGTCTACAGGAAGTACACTTACTATAAAGCAAGTGGATGTAAAAACCGATATACTTGCTCTAAGAGATCAAAGGGATGTTTGGCGAAACTGATAACCAAAAATAATGAAAAGTTAGCGGAGCAATCGGGAGAGCACAATCATCCGCCACCATCACTTTATAGGGCACAAATCAAATCAAACATTTATTTGCATGAATACAGTTTTACAAAGGTCTTATAA
- Protein Sequence
- MSHVTLRRYVTNARNSKEEIKYAPDYAKAKKVFSTDEEKQLVQHIKTELQVFVKPKLYRRKKGARIRIPPDPNILKTAVECVIHKGSSLRSTAKAYNMSHVTLRRYVTKARNSKEEIKYAPDYAKAKKVFSTDEEKQLLQHIKTELQERTIEFIPTKRGKFILLCEGYTFTCRNNNTRWYCSKSPSCPVRVLTNKAGEYIELLGTHNHRPPALYRTPSGSVVLFGKPKLYKRKKGARITIPADPNILKTAVERVIHKGSSLRSTAKAYNMSHVTLRRYVTNARNSKEEIKYAPDYAKAKKVFSTDEEKQLVQHIKKELQVFGKPKLYRRKKGARIRIPPDPNILKTAVECVIHKGSSLRSTAKAYNMSHVTLRRYVTKARNSKEEIKYAPDYAKAKKVFSTDEEKQLLQHIKTELQDVIEFMYNRKSQANPILVYRKYTYYKASGCKNRYTCSKRSKGCLAKLITKNNEKLAEQSGEHNHPPPSLYRAQIKSNIYLHEYSFTKVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -