Amou033795.1
Basic Information
- Insect
- Athrips mouffetella
- Gene Symbol
- -
- Assembly
- GCA_947532105.1
- Location
- OX383964.1:24230475-24231645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-10 1.1e-07 32.8 0.0 2 40 13 52 12 56 0.89 2 2 8.3e-13 3.1e-10 40.9 0.3 2 41 107 146 106 151 0.84
Sequence Information
- Coding Sequence
- ATGACGACAAAAAAGAAGAAACGTGCACCGTGGTCACAAGAGGATTTATCATCTGCCGTAGCTGCTGTAAAGACTGGTAGACTGTCAACTTATAGAGCAGCTTTCGAATATAATATTCCTCCAACAACTCTGAGAGATTATGTTATGAACGAAATGCCCAAACGAAAAATAGGAAGAAAAACATTACTGACAAAGGCTCAAGAAGAAGATTTAATTAAAAGAATATTAAAATTTACAGAGTCAGGGATTCCTCTGACGGCAAAATTGATTCACTTAATGTGCATGTCGAAAAAAAAGAAAAAACGTGCATCGTGGTCACAAGAGGATTTAGCATCTGCCGTAGCTGCTGTAAAGAGCGGTAGACTGTCAACTTATAGAGCAGCTTCCGAATATAATATTCCTCAAACAACTCTTAGAGCGTATGTAATGAACAAAATGCCCAAAAGAAAACGACACGACAGAGGCTCAAGAAGAAGATTTGATTAA
- Protein Sequence
- MTTKKKKRAPWSQEDLSSAVAAVKTGRLSTYRAAFEYNIPPTTLRDYVMNEMPKRKIGRKTLLTKAQEEDLIKRILKFTESGIPLTAKLIHLMCMSKKKKKRASWSQEDLASAVAAVKSGRLSTYRAASEYNIPQTTLRAYVMNKMPKRKRHDRGSRRRFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -