Basic Information

Gene Symbol
-
Assembly
GCA_947532105.1
Location
OX383980.1:20952423-20954267[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.0025 11 7.7 0.0 46 85 104 142 96 144 0.88
2 6 1.8 8.4e+03 -1.5 0.0 54 88 158 193 154 194 0.76
3 6 0.0049 22 6.8 0.5 51 86 200 234 167 235 0.82
4 6 0.13 6e+02 2.2 0.0 48 81 287 319 284 322 0.70
5 6 0.081 3.7e+02 2.9 0.1 1 31 366 395 366 395 0.87
6 6 0.011 50 5.7 0.0 51 83 392 423 389 426 0.82

Sequence Information

Coding Sequence
ATGGAAGCCAGCAATCCGCATAATCAGGGCTACTGGTTTGTTTTGCGAGAAGACCAAGGCAATGTCATATTTAGCAGCAATAACATTGCGACCGTACATAGTCAAAATACCACACCAGCACAAGACCAGCCTCGTTACCTAATTGATACCGGCAGCCGACAGTATGCTCAAGTTACAGAAGCTCCTCCAATACAAGAAGAATCAGAAAGTACTGAAAAAGCAGTAGAGACTTGGCAAAAACCCACTACAGATGACTCCAACATCTGGGACAGAAATAAAGTTAAATTACTGCTCACAATATGCCTAGAATACAAAAACGTTGAAAAAGATATACTGTGGGAAGAAATAGGCAGAGTTTTAAGAGTCCCTCCAGAGCAATGCCATATGAAGTACACACAACTGAGGAGAACATTCCTTCGACAGCTCAAGAGGAACAAAATGGGAAAAGAAATAAGATGGGCTCATTACAACCTTTGTGAACAAGTATTTAATGACCTCAAATTAACAATCCAGCAGCCCTGGGATGAAGCCAGAGTGAGAAAACTCCTTAATCTTTACATTGAGTATATGCCAAGATTCCGGAACCCAGGCTGCTTGCAGAAAGACCTATGGAGAGAAATTGCTTTTCAACTGGGAACTACCAGTTACAACTGCTATCATAAGTTCAAAAATCTGAAGAGAACCTATTTAAATTGGCTAAATAAAAGTCATGGTAAAGGAGTAAAGTGGACATACCATCAATATTTTGAAACAATTTATTATAATTACCCTGCTCATAATTCAAGAGCTTGGGACAGACAGAAAACTAAATTACTTCTAGATTCATATACACAATTAGCCTACAAGTTTAGGAACCCCAAGATACAGAAGAAGGAGCTGTGGAATGAGATATCCAGCAAAGTTGGGGAAACTCCTAATGCTTGTGACAAAAAGTTCCGGAACTTGAAACAAACTTTTGTTAGACTCAAAATGAAAGCCAGTACTGGTAGACCGACAACAAAATGGAGATATTACAGGGACTTTGAAGCCATTTACCAAAACTGTACAAGTTATTTAGAAATAGATGGTACACAGAAATTAGTCTGTCCTTCTAGACAAGAAGACAATTATATAAAACAGCTTCTGGAATTCTACTTGAAACACAAAGAAAAGTTCAAGGATCCTCTCATCAAGAACAGAACCTTGTGGAGGATGATCGGAGCAAAGCTGGGAATGTCGCCAGATGAGTGTGATAAGAAATTCAGAAATCTGAAACAGACATATGTGAGGCTGGCTTCGAAGGGTAAACAGTCTGGGTTATGCAACAAGTGGCCGTATTTCTCGTATTTCGTTAAGATATACGAGGGCGAGCGCGCTCGGGCAGGCTGCAGCCGGGCGGGCGACAAGCTGCCGGCGGGGGGCGCGCTGGGCGAGGCGGTGCGCGAGCTGCACGAGCGACGCGAGCGCCACCGCCGGTTCCAGCGCCTCGCCACGCTCGCCGAGCAGTGCAACGAGATACAGCGCGAGCGCAACCAGATACTGCTAGCCCTGCTGAACAGAACCTGA
Protein Sequence
MEASNPHNQGYWFVLREDQGNVIFSSNNIATVHSQNTTPAQDQPRYLIDTGSRQYAQVTEAPPIQEESESTEKAVETWQKPTTDDSNIWDRNKVKLLLTICLEYKNVEKDILWEEIGRVLRVPPEQCHMKYTQLRRTFLRQLKRNKMGKEIRWAHYNLCEQVFNDLKLTIQQPWDEARVRKLLNLYIEYMPRFRNPGCLQKDLWREIAFQLGTTSYNCYHKFKNLKRTYLNWLNKSHGKGVKWTYHQYFETIYYNYPAHNSRAWDRQKTKLLLDSYTQLAYKFRNPKIQKKELWNEISSKVGETPNACDKKFRNLKQTFVRLKMKASTGRPTTKWRYYRDFEAIYQNCTSYLEIDGTQKLVCPSRQEDNYIKQLLEFYLKHKEKFKDPLIKNRTLWRMIGAKLGMSPDECDKKFRNLKQTYVRLASKGKQSGLCNKWPYFSYFVKIYEGERARAGCSRAGDKLPAGGALGEAVRELHERRERHRRFQRLATLAEQCNEIQRERNQILLALLNRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-