Basic Information

Gene Symbol
osa
Assembly
GCA_947532105.1
Location
OX383956.1:7721307-7745951[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-26 2e-22 80.7 0.0 2 89 236 320 235 320 0.94

Sequence Information

Coding Sequence
ATGCCGCCGCGAACGTCGTCGTCGCTGCCAGACGGCAGCGGTGGGGCGCCGCGGGGCGCAGGCGGAGGTCCGCCGGGACCCGCTCCCAGTCCCGTGCCGCCGCCCGGGGCCATGGTAGCGCAGCCTTACGGACACCATCCCGGCTACAAGGCGCAGCATTACCCACCGCCGCAGCCAGGGTACGGTTACCCGCCGAGGAACCACCATCCTTACCCATACGGCGCATACCGTCCGCCGCCACCACACCCGCCGCAGCACTACCCACAGCTCAAGCCCGGACAGGGGCGTCACATGGGTCCGCCAGGGCAGGAAGGTGCGATGCCGCCGCCGACAGCGCCCGGTGAGACGCACGACAATGGACCGGCCGCGCCTGCAACTGCACTCGTCACTACCGGGCCCGACGGCGCGCCTCTCGATGAGGGCAGCCAGCAGAGCACACTTAGCAACGCCTCCGCAGCATCTGGCGAGGAGCAATGTGGCACTCCCAAAGGTCGCAAGGACTACGGACCGGGCAGCGCTGCGCCGTCGCCGTCCCCAGGAGGCGGGTCGCATTCCTCTGTGCACGACGACTACGACGCGTCGCCTTCCTCCTGGCCGCGCCCGCCTTCTAGTCCCGTATTTAACAGTCACATGCCACCGGAGTCCTTCAGATCAAAGaagtcggactcgctgggaaagctgtatgaaatggacgacgctccggagcggcgcggctgggtggagcggcttctcgcgttcatggaggagcgacgcacgcccatcgctgcctgtccgaccatctccaagcagccactcgacctctaccggctctatttgctcgtacgcgaccgcggcggcttcgtcgaggtgaccaagaacaagacgtggaaggacatagcggggctactcggcattggcgcgtcatcgtcggctgcgtacacgcttcgtaaacactacacgaagaacctgctcgcgtacgagtgtcatttcgaccgcggcggcatcgaccctcagcctattatcaaccaggtcgaagcttccaccaagaaaaagggtgccaagactAATAGCAACTCCACTGCAGCTGCAGGATCGTCGAATTCTCAAGAATCATTCCCGGTCGGTGGTGCGCCGGCGGGCGGCGCGCCTATGGACGGGTACCCGGGCCAGTACGCGCCCTATCCGCCGCAACCCAACCAGCCGCAAGGCGGGGGGCCGGGTGGCGACAACCTCGCCGCCTCTAACCCGTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTATCAACAAGGTTACGGGGGTTACGAATATGGATCACCTTACTCCTCCAATAGACCAGTATATCCGCCGTACGGACCAGAAGGAGACAGAGGGTACGGTTCGGGTGGCGAGTACCGGTACGGCGGGTACGGCGGGGGCTTCCGCGCGGGCGCCCCGCCCCCGGCCGGCACGCCGCCGCCGGCGCAGCCCTACCCCGACTACTACCGCCCGCCGCACCCGCAGCACCCGCAGCACCCGCCGCATCCGCCACACCCGCCCCACCCGCCACACTCGCCGCAACAACCTCCCATCGAGTATGGCGGCGGGAAGCCAGCAGGTTCACCGGGTGCGGCTAACGCGGGAGCTCCGCGACGACACCCTGACTTCACTCCGAAAGCGGAGGGTTACGGCGGGCCGGGTCCAGGGCCGGGCGCGGGGCCGCCTGGGCCGGGGCCAGGGCCGGCTGGCGCAGGCGCACGTTTCCCAGGCTCGTGGGGTCCCGGTTTCCCACGGCCTCCACAGACACAGGCGGCCGCCGCACCTTGGCGCCCGCCAGCCAACGCTACGCAACAGTCGTGGCCTCCACAAACCTACCAACAGGTGCTTATACCACGCAGGGGCCAGTCTACCAACAAGCGCCTCCATGTGTGGGGTCCACGTGAAACAGGAGTCCCCTAG
Protein Sequence
MPPRTSSSLPDGSGGAPRGAGGGPPGPAPSPVPPPGAMVAQPYGHHPGYKAQHYPPPQPGYGYPPRNHHPYPYGAYRPPPPHPPQHYPQLKPGQGRHMGPPGQEGAMPPPTAPGETHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEQCGTPKGRKDYGPGSAAPSPSPGGGSHSSVHDDYDASPSSWPRPPSSPVFNSHMPPESFRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGAKTNSNSTAAAGSSNSQESFPVGGAPAGGAPMDGYPGQYAPYPPQPNQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGGYEYGSPYSSNRPVYPPYGPEGDRGYGSGGEYRYGGYGGGFRAGAPPPAGTPPPAQPYPDYYRPPHPQHPQHPPHPPHPPHPPHSPQQPPIEYGGGKPAGSPGAANAGAPRRHPDFTPKAEGYGGPGPGPGAGPPGPGPGPAGAGARFPGSWGPGFPRPPQTQAAAAPWRPPANATQQSWPPQTYQQVLIPRRGQSTNKRLHVWGPRETGVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01401060;
90% Identity
iTF_01401060;
80% Identity
-