Basic Information

Gene Symbol
XBP1
Assembly
GCA_947532105.1
Location
OX383967.1:25314024-25318495[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8 1.5e+04 -2.7 0.0 17 25 30 38 27 39 0.71
2 2 6e-18 1.2e-14 55.3 12.1 2 63 43 104 43 112 0.94

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATTATCACGGTGCCCAACAACTATTTGGCGATGGAGGAAGTGGACTCGAAGGTGGTGGTGGACGTTCCACCGGCACCTTCGAGGAAGCGGAGGCTGGACCACCTCACCTGGGAGGAGAAAATGCAGAGGAAGAAGCTGAAGAACCGAGTAGCAGCACAGACCTCCCGGGACCGCAAGAAAGCGCGCATGGACGAAATGGAACACAACATCAACCAGTTGATGGCGGCTAACGAGAAACTTACTAGTGAGGTTGCAAGTTTGAAGGCGTTGAACGAGAGACTTATAAGCGAGAACGCAGAGTTACGCAGCGTGGCGGCGGCGCGGGCCGTCGCGGGGGCCCCCGGACCAGCCGAGTCCGCTCCTCAGCAGAAGGAGGGGCCCCCGCCGGCGACCCGCGCGGCGCGCCTGCTGCTGGCGCTGTGTCTCCTCTCGCAGACATCCTCGCCCACCTCGACTCCGACGAGTATCTCGAGACCCTCAATCAACTGGCAGACTCCCTCCTCAAAGAAATTGATGCAAATTCTTCAGGAGAGGATGCAAATGTCCCAGTCGAGCAACCTGGAGAGCGCTCTCAAGGACCTCAAGTGGTGGGGCCCGCAACAAAGCACGTGGAATCCAGTGAAGGCGCAGTGA
Protein Sequence
MSAPIIITVPNNYLAMEEVDSKVVVDVPPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKARMDEMEHNINQLMAANEKLTSEVASLKALNERLISENAELRSVAAARAVAGAPGPAESAPQQKEGPPPATRAARLLLALCLLSQTSSPTSTPTSISRPSINWQTPSSKKLMQILQERMQMSQSSNLESALKDLKWWGPQQSTWNPVKAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
-
80% Identity
-