Basic Information

Gene Symbol
-
Assembly
GCA_033675125.1
Location
CM066217.1:3363688-3369224[+]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-06 0.0053 17.9 0.7 1 13 384 396 384 397 0.94
2 3 1.8e-12 7.9e-09 36.6 1.4 1 29 409 437 409 437 0.97
3 3 5.7 2.6e+04 -3.5 0.1 25 29 663 667 661 667 0.78

Sequence Information

Coding Sequence
ATGACGAACCTGgatGTTAGCAACAGTAGCACAGACAGTAGCTCGGGCTCCTCTTCAGACTCAAGCACCAGCGGAAGTACCTCCACCAGTTCAGGATCTGCTTCCAGTAGCTCTGATTCAGAATCCTCAACCTCCGACACCCCAGCGACCACCACAACCAACAACACGCCTGCACCAAAATCCCCACAAAAAGAGGAGGAAGTCAAAAAGAAAGAAGAACCAAAGCCAAGACGACCATCTAAAGCAAAAGTCTCGTCTTCAAGTGATGATGAAGCTCCAAAACCAGCTAGCCCAAAAACCGCTCCACCCAGAAGACGTATCTCTGCAAAACCAAAGTCCGCAGCTGCGGTACTTGCTAAAGGTAGAACTGGGCAGAGAATGTCTTCTGGAGCGAAAACTCCAAAACCTATtcctaaaacaatacaaaaagcaTCTCCAAAACCTGATACTGGAGCCTTAAAGAAAAAGAGTATATTCTCACCTGACAACAGTTCTGAATCAGAATCCGAAAGTAAATCTTCAACTACAAAATCTCCAAAAGACTCTCCGAGACCTAAACGGAATTCTAGGAAGTCAAGCGATGAGAAGGACACATCCCCACCAACTACACGAAACAATAGTGCAGATAATGACGATTCTAACTCTAAATCAGATTCTAATGCTAAACGTAAAAGTGGGAACAGACCTAGTGGTCCTCCTCCGAAGAAATCTATTGAAGACAAGAGTGCATCTTCATGCACTTCCAGTCAGTCATCAGTTGAGTCTGTTTCTTCAGACAGTGATAGTGAACCTACACCTAAGAAGGAACCGTTGAAGACTGGGAAAACTAAACCACCATCTAGTGCTACAAAGCAGGAAATACGTGATCAGGCAGCGAAGAGCGGTGATTCTGGAGACTCAGCGGTGGCTACGATGCCTAGGAAGCTTACCAGGGCACTGGCTGCAAGAGTGTCTAGAATGGCAACCGCATCAAGACGGACTAACACGGATACTGACTCAGACGTTGATGATAAGAGCAATGATAAAACTAGCAACAGTACCAGCAACAGCACAAGTAACAGTaacaaagacatgaagaaacCTATGAGAGGACGCGCCCCTCCCGCGAGGTCCCCAGCAGTCCCTTCACCTCAGGAACCGGCACGACAGCGCTGTCCTGTACGCGGCTGTGATTCTAGCGGACATCTGGTAGTCCTCCCTTTACCTCAGGAGTGGGCACGACAGCGGTGTCCTGTACGCGGCTGTGATTCTAGCGGACATCTGGGTGGCAAGTCCAACAAGCACATGACATGGGACGCGTGTCCTCTGTACCACAACGTCACTAATGCGTGGTGTGTCGCCGCCTGCGAAGAGCGTGCAGCCGCCGCCGGCGCGCGCCGCAGAGCGCTGCAGCAGCTGCAAGCGCGACCGCGCATCATGCCCACGCTCGAGCAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAACACGCTGCAGCAGCTGCAAGCGCGACCGCGCATCATGCCCACGCTCGAGCAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAGCGCGCCTACCAGCTCAAAGTGAAGGTAACACTACAACACGCTGCAGCAGCTGCAAGCGCGACCGCGCATCATGCCCACGCTCGAGCAGCGCGCCTACCAGCTCAAAGTGA
Protein Sequence
MTNLDVSNSSTDSSSGSSSDSSTSGSTSTSSGSASSSSDSESSTSDTPATTTTNNTPAPKSPQKEEEVKKKEEPKPRRPSKAKVSSSSDDEAPKPASPKTAPPRRRISAKPKSAAAVLAKGRTGQRMSSGAKTPKPIPKTIQKASPKPDTGALKKKSIFSPDNSSESESESKSSTTKSPKDSPRPKRNSRKSSDEKDTSPPTTRNNSADNDDSNSKSDSNAKRKSGNRPSGPPPKKSIEDKSASSCTSSQSSVESVSSDSDSEPTPKKEPLKTGKTKPPSSATKQEIRDQAAKSGDSGDSAVATMPRKLTRALAARVSRMATASRRTNTDTDSDVDDKSNDKTSNSTSNSTSNSNKDMKKPMRGRAPPARSPAVPSPQEPARQRCPVRGCDSSGHLVVLPLPQEWARQRCPVRGCDSSGHLGGKSNKHMTWDACPLYHNVTNAWCVAACEERAAAAGARRRALQQLQARPRIMPTLEQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQRAYQLKVKVTLQHAAAAASATAHHAHARAARLPAQSEGNTTARLPAQSEGNTTARLPAQSEGNTTTRCSSCKRDRASCPRSSSAPTSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-