Alep007362.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- ZNF296_1
- Assembly
- GCA_033675125.1
- Location
- CM066220.1:150558-173802[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.5 3.7e+02 3.0 0.1 3 23 111 131 109 131 0.95 2 12 0.0032 0.33 12.6 2.8 1 23 273 295 273 295 0.99 3 12 0.0057 0.6 11.8 0.1 1 23 301 324 301 324 0.96 4 12 0.006 0.62 11.8 1.9 1 23 329 352 329 352 0.94 5 12 1.6e-05 0.0016 19.9 1.2 2 23 535 556 534 556 0.97 6 12 0.00027 0.028 16.0 3.2 1 23 562 584 562 584 0.98 7 12 4.2 4.4e+02 2.8 4.6 1 23 822 844 816 844 0.96 8 12 1.2 1.3e+02 4.5 0.1 2 23 852 873 851 873 0.94 9 12 0.0012 0.13 13.9 2.3 1 23 879 901 879 901 0.96 10 12 0.0011 0.11 14.1 5.0 1 23 907 929 907 929 0.98 11 12 0.064 6.6 8.5 7.8 1 23 938 960 938 960 0.99 12 12 0.00023 0.024 16.2 0.6 2 23 1003 1024 1003 1024 0.97
Sequence Information
- Coding Sequence
- ATGAACCACACAGAACCAATACCCAGTAACATGGACATGGACCCGCTGAGCTACGAGTATCCATACGAGGGCTACACGCAGACCTACCCGTACCCCAACAAACTGCAGCAGTCCATCTACCAGGCCTACCAACAGACCAGCGCTAACTACACACGTCCTGAACCTACCCTCAATCCGCTACCAACACCACAAACCTCCGTCGTACAGGAACCACCAAAATATGAAGATAAAACTGTCAAACCGGTTGCGAAAAGAAAAAAGAaggaaaagaaacaaaagagtACTTATTGCTCCGAGAAGATTACGGACACTGAGTTTAAGTTCTACGGTTGTGCCGTCTGTAATGTCAGTTACAACGCTCTACATGAACTAGATCAGCATGTCACCGTCCACAAAAATAGAATGACGAGCTACAGGCTGCGGCtaagaaatcaaataaaaaagaaacaaattaaaaaagaaaagaagaagtTAAAAAAGATGATTAAAATTAAGAAGGAAAACGATTTTGAAGTAGAAATTAAACCGGAGGACGGTTATATTGGGGAGGAGAAGGCATCTGACTttgtaaataatgaaatcaatAATTCTGAGTGTAATGGCAATATAAATAATGGAAATTTAACACTTCCGGAACAACAAAATAGTGAAATTAATTCCAGTAAAGGCACGGATTCTGTAAATAATGGTTCTCAAAGTAACGAATCAAGTTTGCCGAACGGAACGAGTAGAGAAAATAGTGAAATAAATAACGGAAATAATACAAATAGTAAAGACGCGATGGACGAGGCGGAGCTAAATAATTTAGagaaaatttataaatgttttgcgTGTCAGAAGCAGTTCACGTTGAGTTATTATTTGAAATTGCATGTGAGATCGCATACGGACGAGAAGCCGTACTCATGCGCTGCTTGCGGGCAGGCGTTCATCACGGCGAGCAAACTCGGGCGGCACAACAAGCGCATACACCTCGCCGAGCGCTACCAGTGCCGCGTCTGCTTCAAGATATACTCGCGGTTCGAGCAGCTGACGGCGCACTTCGACAAGACGCACCCGGAAGACAAGCTGGAGGGAGAGCCGTACGACTACAACGCGATACTGCCCTACCTCAAAGAGCTGGAGGAGCAGCTCCGCGCGGCGCCCGAGGACAGCAAGCCCAAGGTCGAGGACCTGTTCTGGGAGGAGCAGGTCGGGCCGCAGCTCGTGGCCGAGCCGCCGGGGGGCGACGCGCCCGCGGATATCAAGATTGAGGCACACGACGAGGACCAAAAAGTGTTTGTCCCGAAGCTGGACATCACCATCGAAGAGGTGAAGGTCGACTTCGACCTTGACATCAAACGGGAGGTGTCTGATGATGAGGGGGGCGCGGGGGACGGGGGCGGGGCAGAGGGGGGCGACGGGGGGGACGGGGGCGGGGCCAGCGGGGGGGACGAGGGGGCCAATGAGGGCGCTGCTGATGTTAAGGGGGAGGACAGCACGTCAGACGAGGACTACTTCCCATCGAACACGTGGGCTGCGCCCCCCTCCCCGCCCCCGCCGCCCGGGGGGGGCGTGAAGGGCGGACGATCACCCAGCGCTAGGAAAAGAGCCGGAGCTACCACGTGTGATATCTGTCATAAGgtgGTGAGCAGCGCATCGTACATGCGCGTCCACATGCGCACTCACACCGGAGAGAAACCGTTCAAGTGCTACCAGTGTGGGCGCGGCTTTATCACCAGCAGCAAGATGCACCGCCATGTGCTCACACATGCACAAGTGCTAGCAGTGTACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATGTGCTCACACATGCACAAGGTACGTTGTAGTGCTAGCAGTGCACGAGCGGCTCATCACCAGCACAAGATACAAAGACAGCATCAAGACAGAGGGAGAGGACACGAAGCCCGACGTGGACGAGCTGAGCGGTGAACACGAAGAGGGAGACGGAGATACCAAGCCAGTAAAGAAAAAATCCAAAATGAAATCGAACGCGTCAAAATTGAAGAACGGGGAGTCGAAGCCGCGCCGCAAGCATCAGAAGCGGCCGCACGCCTGCGAGTACTGCAACCAGAAATTCCTCCACATAAACATGCTAGAGGTGCACAAGCAGTCGCACGCGGGCGAAGCCCTGGTGCTGCGCTGCCACTACTGCCTGCGCGAGCAGCCCGACgcggccgcgctgcaggcgcacCAGGCCGAGCACACGGGGGCGAAGCCCTACCTCTGCACTATCTGTGGGAAGACCTATAAGAAGCGGGAGACTATGGTGTACCACCGCAAACGTCACGCACCGGACAAAGAGTTCGTGTGCGACATCTGCTCCAAGCGCTTCAACGCGGCGTGCAAGCTGCGCAAGCACATGCACACGCACCGCGCCGAGCGCTTCGTGCTGCGCTACGAGTGTCCCGTCTGCGCGCACATGTTCCACACCAAGTACCACGTGCACATGCACCTGCGCACGCACACGCGCGAGGGCCTCATCCCCGAGCACCAGCGCGCACAGGTGTTGGCGATGGTGCTACAGAACGCTCGCAAGCTGCCGCGCGGCGCCGAGCATGCGTTAGTCGAGCCGCGCGACGAGCGGAGCCGCGTGTGTAACATATGCGGAGAGGTGTTCCAACATTTCTACTACCTAGAAGAGCACCTGAAGTCCCACGGAGCCCGGATCAGCGTGGCGGAGCCCCCGGCCGAGGACAAGAATGACGGTGATTGTGACAACGACGGTGACTATAACAATGACGGTGACCATTACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACggtgactatgactatgacaaTGACTGTGACTATGACAATGACGGTGACTATGACAATGACGGTGActatgacaatgacaatgacgGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACggtgactatgactatgacaaTGACTGTGACTATGACAATGACGGTGACTATGACAATGACGGTGActatgacaatgacaatgacggtgactatgacaatgacaatgacgGTGACTATGACAATGACggtgactatgactatgacaaTGACGGTGActatgacaatgacaatgacgGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGActatgacaatgacaatgacggtgactatgacaatgacaatgacgGTGACTATGACAATGACggtgactatgactatgacaaTGACGGTGActatgacaatgacaatgacgGTGACTATGACAATGACggtgactatgactatgacaaTGACGGTGActatgacaatgacaatgacgGTGACTATGACAATGACGGTGACTATGACAATGACGGTGACTATGACAATGACGGTGActatgacaatgacaatgacgGTGACTATGACAATGACGGTGACTATGACAATGACGGTGGTCATGATGACTATGACAATGATGATGTTGATGACTTGACAAGTTGA
- Protein Sequence
- MNHTEPIPSNMDMDPLSYEYPYEGYTQTYPYPNKLQQSIYQAYQQTSANYTRPEPTLNPLPTPQTSVVQEPPKYEDKTVKPVAKRKKKEKKQKSTYCSEKITDTEFKFYGCAVCNVSYNALHELDQHVTVHKNRMTSYRLRLRNQIKKKQIKKEKKKLKKMIKIKKENDFEVEIKPEDGYIGEEKASDFVNNEINNSECNGNINNGNLTLPEQQNSEINSSKGTDSVNNGSQSNESSLPNGTSRENSEINNGNNTNSKDAMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYSCAACGQAFITASKLGRHNKRIHLAERYQCRVCFKIYSRFEQLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLRAAPEDSKPKVEDLFWEEQVGPQLVAEPPGGDAPADIKIEAHDEDQKVFVPKLDITIEEVKVDFDLDIKREVSDDEGGAGDGGGAEGGDGGDGGGASGGDEGANEGAADVKGEDSTSDEDYFPSNTWAAPPSPPPPPGGGVKGGRSPSARKRAGATTCDICHKVVSSASYMRVHMRTHTGEKPFKCYQCGRGFITSSKMHRHVLTHAQVLAVYERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRCAHTCTRYVVVLAVHERLITSTRYKDSIKTEGEDTKPDVDELSGEHEEGDGDTKPVKKKSKMKSNASKLKNGESKPRRKHQKRPHACEYCNQKFLHINMLEVHKQSHAGEALVLRCHYCLREQPDAAALQAHQAEHTGAKPYLCTICGKTYKKRETMVYHRKRHAPDKEFVCDICSKRFNAACKLRKHMHTHRAERFVLRYECPVCAHMFHTKYHVHMHLRTHTREGLIPEHQRAQVLAMVLQNARKLPRGAEHALVEPRDERSRVCNICGEVFQHFYYLEEHLKSHGARISVAEPPAEDKNDGDCDNDGDYNNDGDHYNDGDYDNDGDYDNDGDYDNDGDYDYDNDCDYDNDGDYDNDGDYDNDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDNDGDYDYDNDCDYDNDGDYDNDGDYDNDNDGDYDNDNDGDYDNDGDYDYDNDGDYDNDNDGDYDNDGDYDNDGDYDNDGDYDNDNDGDYDNDNDGDYDNDGDYDYDNDGDYDNDNDGDYDNDGDYDYDNDGDYDNDNDGDYDNDGDYDNDGDYDNDGDYDNDNDGDYDNDGDYDNDGGHDDYDNDDVDDLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -