Basic Information

Insect: Athetis lepigone
Gene Symbol: -
Assembly: GCA_033675125.1
Location: CM066220.1:5299331-5304550[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00089 0.093 14.4 1.2 1 23 10 32 10 32 0.98

2 14 0.11 11 7.8 0.2 2 23 58 80 57 80 0.92

3 14 0.063 6.5 8.5 0.2 5 23 107 126 105 126 0.94

4 14 0.002 0.21 13.2 0.3 1 23 132 155 132 155 0.96

5 14 1.3 1.3e+02 4.5 4.0 1 23 205 228 205 228 0.93

6 14 0.14 14 7.5 0.4 2 23 254 276 253 276 0.94

7 14 0.012 1.2 10.8 3.1 2 23 299 321 298 321 0.95

8 14 0.0036 0.37 12.5 0.0 1 23 327 350 327 350 0.94

9 14 0.019 2 10.2 7.1 3 19 356 372 355 377 0.89

10 14 0.083 8.6 8.2 0.1 2 23 383 405 382 405 0.92

11 14 0.0026 0.27 12.9 1.2 1 23 412 435 412 435 0.95

12 14 0.00031 0.033 15.8 0.2 3 23 443 463 441 463 0.93

13 14 9.2e-05 0.0096 17.5 5.6 1 23 469 491 469 491 0.98

14 14 3.6e-06 0.00037 21.9 0.7 1 23 497 519 497 520 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00089	0.093	14.4	1.2	1	23	10	32	10	32	0.98
2	14	0.11	11	7.8	0.2	2	23	58	80	57	80	0.92
3	14	0.063	6.5	8.5	0.2	5	23	107	126	105	126	0.94
4	14	0.002	0.21	13.2	0.3	1	23	132	155	132	155	0.96
5	14	1.3	1.3e+02	4.5	4.0	1	23	205	228	205	228	0.93
6	14	0.14	14	7.5	0.4	2	23	254	276	253	276	0.94
7	14	0.012	1.2	10.8	3.1	2	23	299	321	298	321	0.95
8	14	0.0036	0.37	12.5	0.0	1	23	327	350	327	350	0.94
9	14	0.019	2	10.2	7.1	3	19	356	372	355	377	0.89
10	14	0.083	8.6	8.2	0.1	2	23	383	405	382	405	0.92
11	14	0.0026	0.27	12.9	1.2	1	23	412	435	412	435	0.95
12	14	0.00031	0.033	15.8	0.2	3	23	443	463	441	463	0.93
13	14	9.2e-05	0.0096	17.5	5.6	1	23	469	491	469	491	0.98
14	14	3.6e-06	0.00037	21.9	0.7	1	23	497	519	497	520	0.96

Sequence Information

Coding Sequence: ATGCCGTTCAAATGGTTTCGTAACCGCTATCAGTGTTTCTACTGCAATGCCACATTCCTAGACAGCTCAGCACTTAAGGAGCACACGAAAAATCACGACGACGTGAAATTCAGTAGGGTCCTCAAGCATATAGGATCTACTACTCGCATCAAGTGGGATGTCTCTGAAATTTCTTGCAAGTTATGCCcaaaagaaattaaaagtaTCGATCATTATTTAAGCCATATTGCCGAAGCTCACGACTTAAATATGGATAGAGATGTATTCGCTAAATGCTGCTATATATTCAACTTGTCAGACACGACAATGGGCTGTATAGAATGCGGAGAGAGTTTCAAATTTTTCGCTCCGCTACTAAGACACGTCAACAAGTACCATAATAATGCTGAGAAGTTCATTTGTGATTTATGTGGGCTAGCGTTCGCGCTGAAAGGAACGATTAAACACCACTTAAGGAACGTCCATTCCGAGATGAACTCTTGTACTTTTTGCGACCTCGATGATTCAGAAGAGCGTCTCGTCGAAAAGCAACGGAAAGACGACCTCACAAGATTTATGACTATTATCTTGGAAAACTCCTCCATTCTTCCCTTCAGATGGTCCGCTAACAAATACATGTGTTTCTACTGCTGTTGTGCCTTCGTAGAAAGCAAAAACCTCAAAGAACATACGATAGAAGAACATAAAGGGGCTAATTTAAAAAGCGTACTGAGAACCTTAATAGGGGCCAGTCGCGTTAAACTCGACACCTCGTATATAAGCTGCAAGAAATGTGTTAAACAATTCCAAGTTTTCGACGAATTCCTCACCCATTTAATATCGATCCATGACTTCCAATTCGATAAAGAAATAGCCAACAGTATTTTCACTTTTAGCCTTTCTGACGACGGCATGAAGTGTCTTGATTGTGGACAAGAGTTCAGATTTTTTGGGACCTTGTTGAAACATACTCACAAATTCCATAATAAGTATAAGTCGTTTCTATGTGAGATTTGCGGCCAAGGCTTCGTAGCGAGAGCAAACGTAATAAGCCACATAAAAAACGTTCACACTTTTGCAGGGCACTGTCAAAAATGTGATAAGGTCTTCAGAAACCATTACACTCTTCAAACACACTGTGAAAAAGTTCACAAGACTGAAAATCTGAAATGTCCGAAGTGTCCAGAAATTCTCGGCTCAAAATACTTGAAGAAGAGGCATTTAGCGCTTGTCCATGATGTTAAAAAACTGCAGTTCAACTGTGATGAATGCAACCAAGTGTACACAATGAAAAGTAGACTCGTCCAGCATAAGCTACGAACTCATTTGAAGGAGAAGCCGCTTGCGTGCGAGATTTGTGGGTTCAAAGTCTTTAACAATGATCTTTTGAAACGTCATATGGTTCGCCACGATGATTCGAGACCATTCGAGTGTAAATACTGCCAAAAATGCTTTCAGAGAAAGAAAACCTTAGATGTTCATACGAGAATTCATACGAATGATAAGCGATATGTGTGTAAAGAGTGTGGGAGGGCTTTTGTGCAGGTGACAAGCTGGAAGCTGCACATGAGAGTTCATCATGGAACAGTGGAGGGAGCGTCCTGGCATTAA
Protein Sequence: MPFKWFRNRYQCFYCNATFLDSSALKEHTKNHDDVKFSRVLKHIGSTTRIKWDVSEISCKLCPKEIKSIDHYLSHIAEAHDLNMDRDVFAKCCYIFNLSDTTMGCIECGESFKFFAPLLRHVNKYHNNAEKFICDLCGLAFALKGTIKHHLRNVHSEMNSCTFCDLDDSEERLVEKQRKDDLTRFMTIILENSSILPFRWSANKYMCFYCCCAFVESKNLKEHTIEEHKGANLKSVLRTLIGASRVKLDTSYISCKKCVKQFQVFDEFLTHLISIHDFQFDKEIANSIFTFSLSDDGMKCLDCGQEFRFFGTLLKHTHKFHNKYKSFLCEICGQGFVARANVISHIKNVHTFAGHCQKCDKVFRNHYTLQTHCEKVHKTENLKCPKCPEILGSKYLKKRHLALVHDVKKLQFNCDECNQVYTMKSRLVQHKLRTHLKEKPLACEICGFKVFNNDLLKRHMVRHDDSRPFECKYCQKCFQRKKTLDVHTRIHTNDKRYVCKECGRAFVQVTSWKLHMRVHHGTVEGASWH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -