Alep015785.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- -
- Assembly
- GCA_033675125.1
- Location
- CM066227.1:16553319-16563429[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.00067 0.069 14.8 0.8 2 20 225 243 224 245 0.92 2 29 0.00015 0.015 16.8 0.1 2 23 276 298 275 298 0.96 3 29 7.3 7.6e+02 2.0 0.2 2 12 318 328 317 337 0.85 4 29 0.0002 0.021 16.4 2.9 1 23 348 371 348 371 0.97 5 29 0.03 3.1 9.6 0.3 1 23 390 412 390 412 0.95 6 29 0.021 2.2 10.0 6.2 1 23 452 475 452 475 0.95 7 29 0.0019 0.2 13.3 4.1 2 23 515 537 515 537 0.97 8 29 0.042 4.3 9.1 3.2 1 23 587 610 587 610 0.97 9 29 0.02 2 10.1 0.1 1 23 662 684 662 684 0.97 10 29 0.0012 0.12 14.0 5.4 1 23 695 717 695 717 0.98 11 29 0.023 2.4 9.9 1.1 2 23 729 750 728 750 0.96 12 29 0.0033 0.34 12.6 1.4 1 23 760 782 760 782 0.98 13 29 0.00098 0.1 14.2 6.1 1 23 811 833 811 833 0.97 14 29 0.0036 0.37 12.5 2.8 1 23 844 866 844 866 0.97 15 29 1.3e-05 0.0014 20.1 0.5 1 23 874 896 874 896 0.98 16 29 0.00073 0.076 14.6 0.2 2 23 916 938 915 938 0.97 17 29 1.2 1.2e+02 4.6 0.3 1 23 956 978 956 978 0.90 18 29 0.96 1e+02 4.8 6.3 1 23 985 1007 985 1007 0.98 19 29 0.0069 0.71 11.6 3.2 2 23 1018 1040 1017 1040 0.95 20 29 0.016 1.7 10.4 0.2 2 23 1063 1084 1062 1084 0.95 21 29 1.5 1.6e+02 4.2 3.6 2 23 1127 1149 1126 1149 0.95 22 29 0.0027 0.28 12.8 0.2 2 23 1165 1186 1164 1186 0.95 23 29 9.3 9.7e+02 1.7 4.2 5 23 1196 1214 1193 1214 0.93 24 29 0.016 1.7 10.4 0.8 2 23 1225 1247 1224 1247 0.95 25 29 0.22 22 6.9 3.3 2 23 1264 1282 1264 1282 0.90 26 29 0.88 91 4.9 2.2 2 21 1286 1305 1285 1306 0.93 27 29 0.53 55 5.6 0.6 2 23 1355 1376 1354 1376 0.93 28 29 0.0018 0.19 13.4 0.6 2 23 1387 1409 1386 1409 0.96 29 29 4.4 4.6e+02 2.7 0.8 2 19 1447 1464 1446 1467 0.88
Sequence Information
- Coding Sequence
- ATGGCCCTCAAGCTTGGAAAATGCAGGCTCTGCCTCAAGCTCGGCGACTTTTACTCCATCTTCACGGTCGACAATGCCTTGCAGCTCGCAGAGATGGCAATGGAATGCGCCCGGGTGAAAATATACGAGGGCGACGGGCTGCCTGACAAGGTATGCTCCGAGTGCATACAGAAGCTCAGTAGCGCGCACATCTTCAAGCAGCAGTGCGAGCGAGCCGACCAGGAGCTGCGCCGGAACTACGTGCCGCCACCGGGATTTAGCATCAGTCCTCCGCCACCCAACAGACAGAGCAGCGATTCCGCTTTTTCAAACCACACAGATACCTCCATATTGACCAAACCCTCGTCTTCCATTGAAGAGAAAGTGACCCCCGCCGCCAGAACCAGGAAACGGAGTGCGGAAAGCGTCGGAAATGTCTCTACCGGGGGCGCGTCTAGCGACTACAGACCCAGCGGCTCCAAGCGAGTCGAAGAACTTAGGCGCAGCCACAAAAGGCCTAGGAGACTATCAGGAACCACCTCGCTAAATGATTCAGATTATGACTATGATAACAGCGCCTCAAGTCTCGCCAACCACAAGAGGATACACGAGAAAAAGGAAAGTCTTGGGGAAAACACCGTAGTCGAAATACCTCAGAACACAGGAGACGCGACTGACGTAGAGGACAAACTGAACTGTGAGAAATGTGGCAAGACGTTCAAGTTGAAGATCATGTTGAAACGGCACCATGAGGTATGCGGGAAGATTACGAGTCCTATCAAGTCTCCCCAGAAAGAGTTACTTATCTCCTTAGAACCGATTGACGGTATGCAGAACAGGAACATTGTGTGCGAAATGTGCTCTGCCAAGTTCAAAACCGTCGACAATTTAGCGAAGCATATGAAAGTAGTTCATGCTGCTGTGTTGAAAAGGGAAAATCTTGATAAACGGGAAAACGGGAGAGTGTCGGTCCCTTGTATGTACTGCAACAAGACATACGACGACTACTATGTTCACAATGCGCATTTCAACAAATGTCCGCAAAGGGACGAATCTGTGCCGTATAAGTGTCCCATTTGTAAGAAGGCTGTGTCGAGGAAGCACTCTTATTTCCAACATCTTAAGAACATTCACTTTGAGGCTCGGTTGTCGGTGAAGAGTTCAGTGGAGCCTGAGACACAGGAGTACCATGAGTGCAGGGTGTGTTCCAAGAAGCTCCCCTCGCAAGAGTTGCTGATCACGCATCTAGCGGCGCATATGTCCAACATTGATGACAATGATGCTGGAGCCGACAACGAATCAAGAGCTAGCACTTTAGAAGACGACGCGTCCGTACTATCAGTACATAGCCAGTCAAATACTCCCACCGGTATATATAAATGTCGAACATGTGACAAAGAGTTCAAGTACAACAAAGCTCTCCACACTCACGAGGCGCGGTGCCATTCAGAAGTCCCTGTGCAGGTGAAAATCGAGCCACCCGACAAACCGTCGACTAGTCTTTTGAGCGAGAAAGTGTACAAGCAAACCGAGTCTGAATCTAGTCAAGAAGAAGACGATAACACGTGCGATATCTGCGAAAAACAGTTCTCGTACCGCCGGCTGCTTCTCCACCACAAGCGGACCAAACACAACATGAGCTCGGGGTACAAACGAGCCAAAATCTACCTTAAGGACTGCTCCGTGCGCTGCCTCATCTGCGACATCGACATGAAGGTCGGAGCCATCAATGAACATAACCAGACGCATATATCAAAGAACATGAAACCTAAGAACCTGTACACCTGCGCAGAGTGCGAGTTCCAATGCAAGAGCTGTTCTGCTCTCTCGAACCATATAAAGCTGATTCACAGACTAAAACAGAAGAAGATCGAAGATGTCGTGAACCCGTCGGATTTTTGTGAGGTCGTTGTGGCAAAAGCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGCGAGGTTCCGAGCGAGAGCAAGCCGCTGGTGGACCTGAGCGGCTTCACCTGCCCCATCTGTGCCAAGAAGATGCCCACGCTCATATCCCTGAAGAGGCACGTCAACTGGCACTCGAACGTTGGCAATAATATTGCCAAGAAGTACGAGTGTAGTGTTTGCAAGGAGGCGTTTAAGTTCCAATGCCATTACAAGATCCACATGCGGGAGCACTACCGCGACCCCAACCTGGACCCCGTGCACCTCACGTGCACCATCTGCGGGCGCCGCAGCAAACACTTGCGGGCGGCGCAGGCACACATGACGTACCACAAGCAGACGCGCTTCCAGAACAAGGACTACCAGTGCTCCATCTGCGAGCGAGTGTTCCAGCACCGCAAGGTATACCTCTCTCACATGGCCATACACTACAAGAAAGGCGACAGTGTCCACAACACCGTCGTCGGCGACGCACTCCCCAACAACGCCGATAAGACCGTGTTCGACGGCACATACACTTGCCACCACTGCGGCAAAGTCTGCGACTCGGAAGTCTCTCTCAAACACCATCTAATCTGGCACACCTCCAAAACATTCCTGTACGGCGCGCGTCACGAGTGCACCATCTGTAAGGTGAAGTTCACTAACAAAAGAAGACTCGAGCTGCACACTAGAGCTCACTATGAGGACGAAAATGGTCCCTACAAGTGCACCATCTGCGGCAAGGGGTACACCGACGAAGGCTACTTCCAGAGACACGTGAAAGGACACAACTTCGACCACCAGTCACACAAAAAGAGGATCGAGAAAATCAGAAAGGACAAGGTTAAATGTCCAATATGTACGCGGTACTACCCTGACCTAGTGAAGCTGATCCGCCACCTGCGCCGCACGCATCCCGAGAGCAAGATGATCAAGTCGGACCCCGACGCGCCCCCGCCGCTGTACTACTCGTGCAAACTGTGCGCCAAAGTGTTCCTCGACGAGCGTAGACTGCAGTCCCACGAGGAAGCTCATCTGAGAAAGCCAGAGTTCTTTAAATGCAAGTTCTGTGGGAAGAAAACAATATCGCTCAGAAACCACCACGTGCACATAAAGAGTCACCTGGCGCAGAAACATTACGAGAACCCGCTCAAGTGCCCGCACTGCGACGAGAAGTTCGTGAAGGGCTACGGACTGCACCACCACCTGCGCGACGCGCACAACATCGTCGAGAACTGGATCGCCGACCGCTCCGAGATGCCGCTCACCGGCCCGCTCAAGGAGCTCCAGTGCTCCATCTGCATGAAGGTCCTCGCCAGCAAAGGCAACTACGAGCGACACATCGACTACCACAACTCCCTGAGATGTAACTACTGCTTCGATTACTTCAGCTCTCTCCGATTCTTAGAAGGACATCTAGCATTCTCGTGcgaaaagaaaaaactattAGGCGATACCGAAGTTTACCCTAAGAAAGTGAAATGCAACATTTGTTACAAGGCATTCCATGTGCAAGTGAAGCTAGACTGCCACTTGCGCACGCAGCACGGCATCATAGTCGACAGGGAGCAGTCCGCCGGCAAGAAAGAAATTGTATGTGATTACTGCTTTAAAGTTTTCGAAAATGAGTATGCTCTGTCGACTCATAAGATATATCACCGGACCATTGGCTACTATGGGTGTATTTACTGCAAAAAGAAGTTTAACACGATGACTGTGTATCGAAAACATAAGAATCATCACTTTTCACAACTCAATGTGGACAACCCGACCAAGTGCGAGCATTGTGACGAGACGTTCGTCGCTTTTAGGGAAATGATATACCACATGCGGGACGTCCATGGAGATGACAAGGAATGGTTCACAGAGCCCAAGGAGTCCATCGAAGAGACCTGCCCCATCTGCAACAAACGATTCTACAACCTTCACAAGCATTTGACTTACCACGAAGAAAACAAGTGCAAGAAGTGCAACGAGTATTTCTTCTCAAGGGCGGACTTTGATAGCCATCTTTGTGCCATTGAAAGCGATGACGAAGGTACTACATACGTGGGCAATGAGGACACCTTCCAGTACGAGGAGTGCAGGTTCTGCTTCAAACCTATCACCAAGAAGAGCACCAAAAGGCTCCACGACCAGATACACAAGGGCTCGGGCTCTATATCCTGCCGGTTCTGCTGGCTCAAATTTAAAACTATGGACGCTTTCAACATACACGCCTTCTCTCATCGAAGCAGAAAATACAATAAGAAGCCGATAAAATGTCGAAAATGCGGAGAGAAGTTCGTCAAATACGGACCATTTATAAAGCACATGAAATCAGTACATAAGTCTACGAAGAAGCTTCACTACAGAGCAGTTGTGAAGCCTGAGACATGTGTTGTTTGTGGAGACGACTTCCCGAACCTGCACAACCACTATCGCGCTCATCTCCTGAACCAATGTCAGGGGTGTCTCAAATACTTCACTTCGTACAAACTGATATCTGCGCACGAGTGCGGCAAAGAGGATGCGGATCCATCTAAGGTGTTCACTAGTGATGCTAACTTGAAAGAGCTGATAAACACGTATGTTCCTAAGGACGAAAAAGATGATGAGAAGTACTACGGTCATACTGATGATGAGGAAGAGGAAATAGAGCCTCAGGTAGCACTTGGTGAAGAAGAGGAAAGTCAGGAGAGTAAAGACATACCGATGCTGCAGTCGCCGATAATATCAGATGTGCTGTCGCTGTTCAAAGCGGAGATGAACGGAGTGGGCGAGGCAAGCGGCGCGGCTGGTGATGCCGACGACGTGGTGCACATCACTGACGATGACTCGGTAGGCTTCGATAACTCCATGATCCCCGTCGTTGTTGttattgatgatgatgattag
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMAMECARVKIYEGDGLPDKVCSECIQKLSSAHIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDTSILTKPSSSIEEKVTPAARTRKRSAESVGNVSTGGASSDYRPSGSKRVEELRRSHKRPRRLSGTTSLNDSDYDYDNSASSLANHKRIHEKKESLGENTVVEIPQNTGDATDVEDKLNCEKCGKTFKLKIMLKRHHEVCGKITSPIKSPQKELLISLEPIDGMQNRNIVCEMCSAKFKTVDNLAKHMKVVHAAVLKRENLDKRENGRVSVPCMYCNKTYDDYYVHNAHFNKCPQRDESVPYKCPICKKAVSRKHSYFQHLKNIHFEARLSVKSSVEPETQEYHECRVCSKKLPSQELLITHLAAHMSNIDDNDAGADNESRASTLEDDASVLSVHSQSNTPTGIYKCRTCDKEFKYNKALHTHEARCHSEVPVQVKIEPPDKPSTSLLSEKVYKQTESESSQEEDDNTCDICEKQFSYRRLLLHHKRTKHNMSSGYKRAKIYLKDCSVRCLICDIDMKVGAINEHNQTHISKNMKPKNLYTCAECEFQCKSCSALSNHIKLIHRLKQKKIEDVVNPSDFCEVVVAKAEPLDWIQSHNDFGEVPSESKPLVDLSGFTCPICAKKMPTLISLKRHVNWHSNVGNNIAKKYECSVCKEAFKFQCHYKIHMREHYRDPNLDPVHLTCTICGRRSKHLRAAQAHMTYHKQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSVHNTVVGDALPNNADKTVFDGTYTCHHCGKVCDSEVSLKHHLIWHTSKTFLYGARHECTICKVKFTNKRRLELHTRAHYEDENGPYKCTICGKGYTDEGYFQRHVKGHNFDHQSHKKRIEKIRKDKVKCPICTRYYPDLVKLIRHLRRTHPESKMIKSDPDAPPPLYYSCKLCAKVFLDERRLQSHEEAHLRKPEFFKCKFCGKKTISLRNHHVHIKSHLAQKHYENPLKCPHCDEKFVKGYGLHHHLRDAHNIVENWIADRSEMPLTGPLKELQCSICMKVLASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLLGDTEVYPKKVKCNICYKAFHVQVKLDCHLRTQHGIIVDREQSAGKKEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCKKKFNTMTVYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWFTEPKESIEETCPICNKRFYNLHKHLTYHEENKCKKCNEYFFSRADFDSHLCAIESDDEGTTYVGNEDTFQYEECRFCFKPITKKSTKRLHDQIHKGSGSISCRFCWLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFIKHMKSVHKSTKKLHYRAVVKPETCVVCGDDFPNLHNHYRAHLLNQCQGCLKYFTSYKLISAHECGKEDADPSKVFTSDANLKELINTYVPKDEKDDEKYYGHTDDEEEEIEPQVALGEEEESQESKDIPMLQSPIISDVLSLFKAEMNGVGEASGAAGDADDVVHITDDDSVGFDNSMIPVVVVIDDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00785388;
- 90% Identity
- -
- 80% Identity
- -