Alep006697.1
Basic Information
- Insect
- Athetis lepigone
- Gene Symbol
- -
- Assembly
- GCA_033675125.1
- Location
- CM066219.1:16907669-16910362[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-08 5.2e-05 24.0 0.0 1 39 16 55 16 61 0.91 2 2 0.91 1.5e+03 0.1 0.1 24 40 685 701 685 704 0.88
Sequence Information
- Coding Sequence
- ATGCCACGTAAATACTCCCGGACCTCTTCGCGGGCTACAACCTACACTAAAGACGAGCTACAATTAGCCAtgcagaaaattaaaaacaaggagcTCACCTATGCAGCTGCTTCAAAAATGTACGGCATACCTACATCTACACTTAGTGATAGAATCCTGAAGAAAACAGCAATAGTAAGTAATACCCTTGGCAGACCAACAGCTATTCCAGTGGCATTAGAATCTCAACTGGCAAACTGCCTACGAACGCTTGAAAAGTGGGGTTGGGGGTTATCACGAGAAGAGGGCAAACACATGTACGAACAGTGGATGTTACAGAATCCTGAAAAATACGATTTCAATCTTGCGTATGCAGCCAGCAAAAGGGGCTGGATGGAAACTAccattttttatgatttcataTCAAAAGTATTTATACCTAATTTGGGTGAAGACAGGCCTGTATTATTGCTGTATGATGGACATGTCAGTCATGTCGATGATCAAGTAGTAGCTTTAGCAGTAGAAAACAACATCACTATATTAAAACTTCCTGCACACACATCACATCTATTGCAACCGCTAGACTTGGCTGTGTTCAAATCATTCAAAACAATTTGGGATAAAAACCTTGTAAAATGGCAACGACAAAACGTTGGagttaaattaagaaaacaaaGCTTTGCTCAAATGTTTGCTGAAGCTTGGCAGAAAACCAAACCACAAGTAATACAAAATGGCTTTAAAAAAGGTGGCATTTACCCTTTCAATCCTGAGATTATACCAAAAAACAAATATGATCCAGCAGCTTATGCACGATGGCAAAAACACATGACACCAGTGACTTATAAACAACCGAAAACTTTATCACAAATGTGTGTAGACGAAATTAGTAAGATCATGTCCTGTAACGGCTCTACTTCTATACCAAATGATAATATTGTTTACGCTGAACAAAATAGCCTGCAACAGCCTCTTGCTAGTTTCGAACAAATGCTTTTAGAAAAAGTTTCGCAACATCCTCAAAACTCTAAGAATAATATTGCAGTTAAGCTAAAACGAGTTGCTAAAGGTGCAGAAGTAATAACAAATTCTTATCTAGAAAAAATGCAAGCGATAGAATCAGCAAGCGAAACAAAGGAAAAAGATATACCGAAAACAAAAAaacgacaacaaaaaaaagtgcTCCAACCtaaaaattattcatttgaccCTACACCAGGACCGTCTGGAATTCAAGATAAAAACTTAAGAACAGAATCGATTTTGACTGACAAAAACAGCACCGACGTGACTAAAAAAGGCAAAGGAGTAGGAAAAAGAACTCGAGCTGGCAAAGAAAATGATTCAAAAGTGAACAAGGATGATGAAGACAGGCAGACAAATGTTTTACATAAATTAGATAATAAATCTGGCCAAACGACAACTACAAAAACAGGTACGAGAAAGCGTAAAAGGTCTAATAGCAGTGTAACGACAATTGAAAGTATTCAGATGAGCATTCACAGTGATTCTGATTTATTAGATTCTTTGAGTGACATATTATCTAACTgtgataaattgactgactttGATTATTATGAGGAAGACAAGACTGATTTAATATTTGCTTCAAGAGAACAACAAATTGAACAAATAGTTAAAGAAATACATGAAATGGAAAATACTCAAGAGAGAACAGCAAGCAATATGGAAAATAGCTGCAAAGAGAGATGTGAGATAGAAGAAATTCCGGAAATTCATACGACAGAGTCCAACTTTAATCCAAATGATAAAAAGAAAGTGACAATCTTATCATCTGTAAAAATCACACCAGAAAACCAAGCTTTCTATAAAATTTTACCCAAAAATTTACAACTAAAGCCAATTGATAAAgatttagatttatttacaaACCAAAATCAAAAACTATCACAAAGTACAAGTGTGTCTAATATACCAAAGAAAAAACCAAGGAAAGCTAATGACCCTATAAAAACAACTACTAAAGACCAAAACGATTTCTGTGAAAATTTTCATACCAACATATATGACGATGATAACGGTGGGACcaaaaatgatattgatgaTTTGAAAATATTCAATATTGGGGATACAGTTCTTGTTAGATATTTCAAACGAACTTGGAGATATTACGTCGGTGTAATTGAAAAATGTAATATCAATTCAAACCCAAATATGTACAAGATAACATTCTATAAAACTATCGGCaagaaaaacaacataaaatttattattcctAAGCGAAAAGATGAAGACTACGTACCTGATTCAAATATAGTCAAAGTGATAGaactattatag
- Protein Sequence
- MPRKYSRTSSRATTYTKDELQLAMQKIKNKELTYAAASKMYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVALESQLANCLRTLEKWGWGLSREEGKHMYEQWMLQNPEKYDFNLAYAASKRGWMETTIFYDFISKVFIPNLGEDRPVLLLYDGHVSHVDDQVVALAVENNITILKLPAHTSHLLQPLDLAVFKSFKTIWDKNLVKWQRQNVGVKLRKQSFAQMFAEAWQKTKPQVIQNGFKKGGIYPFNPEIIPKNKYDPAAYARWQKHMTPVTYKQPKTLSQMCVDEISKIMSCNGSTSIPNDNIVYAEQNSLQQPLASFEQMLLEKVSQHPQNSKNNIAVKLKRVAKGAEVITNSYLEKMQAIESASETKEKDIPKTKKRQQKKVLQPKNYSFDPTPGPSGIQDKNLRTESILTDKNSTDVTKKGKGVGKRTRAGKENDSKVNKDDEDRQTNVLHKLDNKSGQTTTTKTGTRKRKRSNSSVTTIESIQMSIHSDSDLLDSLSDILSNCDKLTDFDYYEEDKTDLIFASREQQIEQIVKEIHEMENTQERTASNMENSCKERCEIEEIPEIHTTESNFNPNDKKKVTILSSVKITPENQAFYKILPKNLQLKPIDKDLDLFTNQNQKLSQSTSVSNIPKKKPRKANDPIKTTTKDQNDFCENFHTNIYDDDNGGTKNDIDDLKIFNIGDTVLVRYFKRTWRYYVGVIEKCNINSNPNMYKITFYKTIGKKNNIKFIIPKRKDEDYVPDSNIVKVIELL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -